Basic Information

Insect: Micraspis discolor
Gene Symbol: PLAGL1
Assembly: GCA_030674115.1
Location: JARTUT010001740.1:2584357-2592546[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.078 16 7.6 1.0 1 21 35 55 35 56 0.93

2 22 0.01 2 10.4 3.0 1 23 62 85 62 85 0.93

3 22 0.00011 0.023 16.5 4.0 1 23 318 340 318 340 0.98

4 22 8.3e-06 0.0017 20.1 3.5 1 23 346 368 346 368 0.97

5 22 0.00011 0.022 16.6 5.4 1 23 373 395 373 395 0.99

6 22 0.00013 0.026 16.4 1.4 2 23 402 423 402 424 0.95

7 22 5.2e-05 0.01 17.6 0.2 1 23 429 451 429 451 0.98

8 22 0.011 2.1 10.3 0.1 1 23 461 483 461 483 0.96

9 22 0.00069 0.14 14.1 1.4 1 23 489 511 489 511 0.96

10 22 8.9e-06 0.0018 20.0 0.1 1 23 517 539 517 539 0.98

11 22 2.4e-08 4.8e-06 28.1 1.9 1 23 545 567 545 567 0.99

12 22 2.4e-05 0.0049 18.6 3.2 5 23 576 594 573 594 0.95

13 22 0.0081 1.6 10.7 3.6 1 23 632 654 632 654 0.97

14 22 1.6e-05 0.0033 19.2 2.3 1 23 660 682 660 682 0.97

15 22 0.0057 1.1 11.2 1.9 1 23 688 710 688 710 0.98

16 22 0.0017 0.35 12.8 0.2 2 23 717 739 717 739 0.92

17 22 0.00033 0.067 15.0 1.2 1 23 744 766 744 766 0.97

18 22 0.057 12 8.0 7.9 1 23 776 799 776 799 0.96

19 22 3.1e-05 0.0063 18.3 1.0 1 23 806 828 806 828 0.98

20 22 8.4e-06 0.0017 20.1 0.5 2 23 835 856 834 856 0.97

21 22 2.4e-08 4.7e-06 28.1 4.2 1 23 862 884 862 884 0.99

22 22 6.2e-05 0.012 17.4 0.2 1 23 890 912 890 912 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.078	16	7.6	1.0	1	21	35	55	35	56	0.93
2	22	0.01	2	10.4	3.0	1	23	62	85	62	85	0.93
3	22	0.00011	0.023	16.5	4.0	1	23	318	340	318	340	0.98
4	22	8.3e-06	0.0017	20.1	3.5	1	23	346	368	346	368	0.97
5	22	0.00011	0.022	16.6	5.4	1	23	373	395	373	395	0.99
6	22	0.00013	0.026	16.4	1.4	2	23	402	423	402	424	0.95
7	22	5.2e-05	0.01	17.6	0.2	1	23	429	451	429	451	0.98
8	22	0.011	2.1	10.3	0.1	1	23	461	483	461	483	0.96
9	22	0.00069	0.14	14.1	1.4	1	23	489	511	489	511	0.96
10	22	8.9e-06	0.0018	20.0	0.1	1	23	517	539	517	539	0.98
11	22	2.4e-08	4.8e-06	28.1	1.9	1	23	545	567	545	567	0.99
12	22	2.4e-05	0.0049	18.6	3.2	5	23	576	594	573	594	0.95
13	22	0.0081	1.6	10.7	3.6	1	23	632	654	632	654	0.97
14	22	1.6e-05	0.0033	19.2	2.3	1	23	660	682	660	682	0.97
15	22	0.0057	1.1	11.2	1.9	1	23	688	710	688	710	0.98
16	22	0.0017	0.35	12.8	0.2	2	23	717	739	717	739	0.92
17	22	0.00033	0.067	15.0	1.2	1	23	744	766	744	766	0.97
18	22	0.057	12	8.0	7.9	1	23	776	799	776	799	0.96
19	22	3.1e-05	0.0063	18.3	1.0	1	23	806	828	806	828	0.98
20	22	8.4e-06	0.0017	20.1	0.5	2	23	835	856	834	856	0.97
21	22	2.4e-08	4.7e-06	28.1	4.2	1	23	862	884	862	884	0.99
22	22	6.2e-05	0.012	17.4	0.2	1	23	890	912	890	912	0.99

Sequence Information

Coding Sequence: ATGGTGATATTTCTGGATTCTTTGATACTTTGGGTTATCCTTGGTATCAATATACTATACGAGTTGTACGAGTCCGCCTCCTACGATGATCAAGAATCAAATTATAAATGCGAAGCTTGTACCCGTTTTTTCGCAACAAAAGAGGCTTATTTCGGCCATCACATGAGCCCGTGCGGCAAGAAATTTTCATGCTGTATTTGCACAGAAAGCTTCAAAACGATCTCGAGTCTTTATGAGCATTCGGAGAGGTACCATATGCCGCAAGATGAAGATGAGGAGGAAATGGTACTGGATTACAACGGACAACTTGTGAAAATTCCCAATCCAAACATAGTGGAATCCAATGAACTTCTCTACGTCCTTGATGATAGCCAATGTGTCAATGAAATTGTGATCGAGGAACCACAGCCGGAACAAGAAAATGATATAGCAGAAACTGTTAGAATCGTTAGACTGGAACACGGATATATGTTACAAGACGATGATCAGAGTAAAGAAATCAGAACTCGTACTCGCAAAAATGTCGCTCCAAAACCACGATCCAATGCTTTGAAACGGAGGCACGAGTTGCCAGATTTCACGTCCACGAACTATTTATTTATACAACCAAATGAGGAAATTGATATACCTCATTTTAAATGTTTGAGatGTTTCTATCGGGAAGATTCTTACGCCTACAATTTACAGGATGAATTTTGTTATATTCCCGAGCTGAAGCAAGACCACAATCTCCCTCAAGACCTTCTACAGACATCGGTTAATCATTTCAGTCCGACCGACACTGAATTACTAAGAATGCTTACGACTGAAGAAGAATGTACCGCCATCTTACAAAATATCGCTGCAAGTGAACAACTTGAAAGCTTAATAGCAAGCAGCACAACCTTCGATCAACCTATTCAGATAccgattgaaaatttcgaaaaagaaaagATTAAGAAAGAAGCGAACTTCAAATGTGAAATATGCGATAAATGTTATACcacgaaaaaaatattgaagaagcaTTTGGGCACACATTCTGGAATTAAATCTTTCATTTGCAGCGTTTGCGGAAAGAAATTTAGACATAATTGTGATCTTACTGCACACGAAAGGATACATAAAAAACCAGGTTTTCAATGCGACATTTGTTCAAGTATGTTCATACATAAATCACACTTGATAACTCATAGACGGAAACATTTAAGAGAATATGCTGCTTATTGTAAAGATTGCGGTGTAGGTTTCGTTAGGAAAAGCTTATATGACAATCATAGAAGAATACATCATGATGGTGAAAAATACATTTGTGATGTATGCGGACAATCGTTATCAACTTCTTCAGGACTGAGAGAACACAAAACTACCCACGACGAAAAGTACGGGGAACATCGGAAACACATTTGTGAAATTTGCGGTAACGGTTATTTAACAGCAAGAAACTTGAACGCTCACGTCAAAATACACAGCAGGTTGAGAAATCACATATGCAACATCTGTGGAAAATCCGTCAGCAGTAAGAAAATTCTGGAAACTCACACAAAAATGCATACTGGTGTTAGAGATTTCATTTGCAACATATGTAGTGCTTCGTTCGCTTCCAGTGAATATCTCAAAGTTCATCTAAGGATTCACAGCGTCAGTAAACCTTACAGTTGCCAGACTTGCGGCAAGAGTTTCACCCAGAAAACATCACTTACTGTCCATATTAGGACCCACACCGGTCAAAAACCATACAAATGTGAATGTGGAAAAAACTTTACTACTAAAAGCCATCTGATGGCACACTACAAAACACACGATGTTGGCGGAGTAGATTTAGAATTCATTTCGAACATCGAAAGGGATGACCAAACAGAATCAACTGTTAAATGCGAAGTGAAGTTAGAAGAAGGCCGAGAGGAGTTTCCATTCATCTGTACTCAATGCTCGAAGGGGTTCCATAAAAAGGTTCGCTTGAAAAATCACCTCTTATCTCATAGTCAAGAGCGTCCTCACGAATGTCCTATATGTCAGAAGAAGTTCAAAAGGAAGTATGAAGTTACGGTACACAACAGGATCCATTTGAACACAAATTTCTTCCAATGTGAATTCTGTCTGAAAATACTGAAATCAAGAGGTTCTCTCAGCACGCATACGAAGCGCCATCTAAAAGAATATGTCGCCACATGCGAGTACTGTGGTGCAGGATTCGTTACCAAGCAAGAATATCAGAACCACGTGGGTTCTAAACACGGACAGAGTATGCACGTTTGCGATATCTGCGACAGACCTTGTTACGATAAGGCTGCCTTGCAGAGCCACCGAGCAAGGCATGAAGAAGGATACGAAACGAATCCCAAACACAAATGCGAGCTGTGCAACAAAACCTTTTTACAAGAGAAGTATCTAAAACACCACCATATGAGGATACATAAGAACGGAGGGCAGAGGTATATTTGTGATCATTGCGGAAAGGAGGTGAATTCAAAAAGGAGTCTTAGAGATCATCAGTTGATACATAAGGGGTTGAAACCGGTAGAGTGTCCACAGTGCGACAAGAAATTCGCTTTAAAAACAACCTTAAACCTGCATTTAAGAACACACTCAGGAGAAAGACCTTACAAGTGTCAAGATTGCGGCAAATCATTCACTCAAAGAAGTTCTTTCAAGACTCATATGAGGTATCATACGGGCGAACGTCCGTATCAATGCGCTTTTTGCGATCAAGCTTTCGTCAGCAGAGCCGCCATGACTTTGCATATTAGAAGACATTGA
Protein Sequence: MVIFLDSLILWVILGINILYELYESASYDDQESNYKCEACTRFFATKEAYFGHHMSPCGKKFSCCICTESFKTISSLYEHSERYHMPQDEDEEEMVLDYNGQLVKIPNPNIVESNELLYVLDDSQCVNEIVIEEPQPEQENDIAETVRIVRLEHGYMLQDDDQSKEIRTRTRKNVAPKPRSNALKRRHELPDFTSTNYLFIQPNEEIDIPHFKCLRCFYREDSYAYNLQDEFCYIPELKQDHNLPQDLLQTSVNHFSPTDTELLRMLTTEEECTAILQNIAASEQLESLIASSTTFDQPIQIPIENFEKEKIKKEANFKCEICDKCYTTKKILKKHLGTHSGIKSFICSVCGKKFRHNCDLTAHERIHKKPGFQCDICSSMFIHKSHLITHRRKHLREYAAYCKDCGVGFVRKSLYDNHRRIHHDGEKYICDVCGQSLSTSSGLREHKTTHDEKYGEHRKHICEICGNGYLTARNLNAHVKIHSRLRNHICNICGKSVSSKKILETHTKMHTGVRDFICNICSASFASSEYLKVHLRIHSVSKPYSCQTCGKSFTQKTSLTVHIRTHTGQKPYKCECGKNFTTKSHLMAHYKTHDVGGVDLEFISNIERDDQTESTVKCEVKLEEGREEFPFICTQCSKGFHKKVRLKNHLLSHSQERPHECPICQKKFKRKYEVTVHNRIHLNTNFFQCEFCLKILKSRGSLSTHTKRHLKEYVATCEYCGAGFVTKQEYQNHVGSKHGQSMHVCDICDRPCYDKAALQSHRARHEEGYETNPKHKCELCNKTFLQEKYLKHHHMRIHKNGGQRYICDHCGKEVNSKRSLRDHQLIHKGLKPVECPQCDKKFALKTTLNLHLRTHSGERPYKCQDCGKSFTQRSSFKTHMRYHTGERPYQCAFCDQAFVSRAAMTLHIRRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -