Basic Information

Gene Symbol
Trerf1
Assembly
GCA_030674115.1
Location
JARTUT010001305.1:800047-836736[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-10 2.1e-07 32.3 0.1 2 46 1364 1408 1363 1408 0.96

Sequence Information

Coding Sequence
atgTGGCACTGGACGGTCTTGAAGGAGGTTGCCAGTCCTAACAAAGAATGTGGTGAACCTTCCAGGCATACATGTGCCAAAGTGTTCGGAAATGCCTCGGCCTTGGCGAAGCACAAACTGACACACAGCGATGAGAGAAAATACGTTTGTACCATGTGCGGGAAGGCCTTTAAACGACAGGACCACTTAAACGGTCACATGTTGACTCATCGCAATAAAAAACCTTACGAATGCAAGGCAGAAGGCTGTGGAAAAAGTTATTGCGACGCGAGATCCCTAAGGAGGCATACAGAAAATCATCACAGTTCAACAACTTTGAACACGGCCAGCACCACCATGTCTCCGGCTCAGGGGGCGGCTTCTGGCGATGCTTCCTCGCCCCACGGATCCAGCTGCATTCAATACGCGCCTTCACCAACTTCCACGTCCGGGGGCAAAAGTCAATTGCAACAACTGCTGTCCTCCGAACCCAAAAGCGGCTCAGGCAACAATGACGGGCTGACCAAACAACAACTGGATCTGATTCATCAAATAATGGAACAAACCCAGCGACAATCTCAATCCACCAGTAAACCTGTTCCAAAACCGGCCTCAAAGCTCGTTAGCAAAACCCCTGCGAAAGTGCAGAGGACGTGGTCGTCTCCGTTCCTCAAGTATTCGATTCTGTCTGCTGACTGGCTTACTGCTTCCGTAACACCCATTTTTAAAAAGAGGGATAAACTATCACCGCACAATTACAGACCCATCAGTTTACTTTCTACGGCTTCCAAGGTCTTGGAAAGGATCGTTTCGGACCAGATCACCCAATTTGTGTTATCAAACTATGTTATCCCTAATGAACAGCACGGATTCTTATCTGGTGGCTCTACCATAACCAATCTCATTTTGTGCATCAATGAGTGGACTAAAGTATGGGACCAGGGGGAGCCTGTCGATGTTATCTACCTTGATTTCTCCAGGGCCTTCGATAGAGTCCCTCACCGTCGGTTGCTTGCTAAGCTCTCTCATCTTGGAATCAGGAGAAGTGTTCTTGCTTGGATTGGTGCTTATCTATCCAATCGTTTTTTCCACGTCAGGGTTGATTGTTCCTTCTCCAGTCCCGGGAGCCCTTTGTTATCTGGTGTCTCACAAGATTACTCCACTCTTCGTGCTCTATATTTGCAGATGATACAAAAATCTATAACTTTCTCTTATCTAACTTCACTGAATGAATTAAATGTTTGGTGTGGTGAATGGCTACTTCCTTTGAATGTGGAGAGGTGCTGTGTACTTCATATTGGTAAAAACAACCCGAGGAGGGAGTACTTCATCGGCGGCGATAGGCTGAAACAAGTTTCAAGTCACTGTGACCTGGGTGTAACTGTCTCCGAGGATCTTCGCTGGTCAAACAATGTAAGCATCATCACTGCCAGAGCCAGACAGTTGACTTATGCCATCCAAAAGACCTTCAACGGATGTGATGTTGCTACATTGAAGCTTCTCTTCACCACCTACGTTAGATCATTGTTGGAATATGCTGGCCCAGTTTGGTGGCCTTCCACTCGTGCCGATGAGTATTGCCTCGAGTCGCTACCACAAGGATCCACCAACAAAGTAACATCTTGTGCCGTTTCATCCCATGCAAAAGTAACAACAACTACGCCATCTACTTCAAGTCCAGCCACTTCAACCAAACCCGAACCTAAGCCTGTTGAGTGTAATCTGTGTCatcgaaaattcaaaaatatcccAGCTCTGAATGGCCATATGAGACTACACGGTGGTTATTTCAAAAAGGATACCGACAACAAGAAATCAGAAAAGAAAGATTCGAACGCCCCCCCACTTCAAACTGCTAGTGTGAGCGTTCGAGCGCtcatcgaagaaaaaattattagtaaaaGATCCACCACTAACAACACGCAGCAAGCTTCTTCTAAGACGTCGGAGGAGTCCATCAAGAGTTCCAAAGCGCCTCCATTATTTCCATTAACCGTGCATTCCACAACTACATCAACGAATTTGGAGAATAAAAATACTTCTTTTGTTGTACCTGCACCTCCTCAGCCATCGACAGATAAATCAAGAAGACATTCCGAAGCAGATTCATTCACTGCAAATAGGGCTACTTCAACGACTCAACAGGAAGCTGACACCTTGGCTGATTTGATCCTGAAAAGGGAGAAAGTATCACTGAAAAGAGCTACCTCTGATCCGGGTCAGCAGCAATTGATTCAATTTCAAGCATCAGAATCTTTCACTTTGACTTATCAAGGAGATGATGGATACCTCTCACCACCCCTTCAAGACGATGTGTTTACGCAAGTTCAAGACAGTATGCTTCTTCAAGGTGTTGATTCGCAACAGCTAGCTTCAATACAATTCCAAGCGGACTCACTACTACAAGATCAGAATGACCAGCAAATACATGATATAGCTCTGGATGAATATACGTCAATCCAAAACGATTCTCCGTCATATCAAACGAACCATTCGGTGAACCAAGATTTACAAGCAGTTTTGGATTCTCCCTTGCCAGATAGCTTGGCTGATTTCAGTACCTTCCATACAAATTCTGGTTTGGAATTGTCTTCTTCTAGTTTTCCGAATCAATCACCAGCGCATTTCACGAATTCTCCGCATGCTACTGTGCCGACTCCAAGCCCTCTACAGAGTCCTTCTATACGTCATGATTCGCCAGGTTTTGCTTACCCTACACCTCCAGCTAGTCATGAGGCTCGTAGTCCTTGTTTTGGACAGAACGCGTCTCTTCCTCTTGTCTCTCCGAAGCAGAATGATTTTGGTCAGGTTCCTGAAAGAGGAATTGATGAACCACCACAGGTATCTTCTCCTTTATCTGCTGCGTTTTTTACGTCTACAATGTCTAGTTCGGCTGCGGTTGAAGAAGCTCTCGAAGAAGTTCTACCTGGGGAGAGCATAGCTGCAGACGATATCTACCCACTGTCGGATTCTCCAGATCCTTCGTCACCCGTTCCTGTTGGCCTTACTCCTTCGCCCTCGCCTTTATCGAATTTACCTTCTTCTTCAAAACCACCCACTCTAACGAACAACTCTGGTAATTTCAGTGTTCCtcagaattttattaatttctcgATGTCACCCCAGTACACCTTTCAATCCCAGATGCTACCAAACTCCGATGATCCTCTGCTATCAAGCAGTCCGAAAGACTTCGTTACGAAGAAAAGGATAGAGCTGAATGGAGTCCCTCTTCGGCTGATAAGCAACCACGGGCTGATCGACTTGAATGGTGGAAATTTCGCCGGTATTCTAGTGGATTCTAACGGTGAAATTAAGTTGATTCAAACCGGAAACGCTCCCATTCAACCGAAAAATTTTGTTATAACGAACACTTCTATTATACAGAGTTCGGAAGTGAGTAGTGACGATAGGAACATAATGAGTGTTCAAAAAATACTGAAAGGTGTTCAGTGTTCAACGAAACAAATAATCACGAGGCCTAAGCAAATTATTGAATCAAAAAAGGAAGAGTGCAACGATGTTTTCTTAAGCCCTACAACGATACCCTCAAGTCCAGCAAAAGTTTCCAGAAAACGGCCTAGATCAGAAGCTTTACAGTTTCCTGTTTTGCATCAATCAAAATTACGAGCAAGTAGAAGTAAACCTCAGGGTTGTACAACCTATACACCTCAACCTATTCTGAGTCCCAACAGATGTGGAACAGGCCTCTATTGCAATATAAAACCTAAATCAGAAGAGGAAGTGAACACGTGGAGTAACGAACCAGTTCCAGAAACTGATTCAACTCCACATATAAATGTTGGTTCACAGTTCCAATGTCGGATACCTTCTTATATGGATATACCTGATAGGTATTACAGGGAAAGAAAACATGAATTTTTACTTTGGGATCCAGGAATCGATAAAAACACAGAAAGCGAAGTGGATATGTACCTTGAGTTTGCTTGCTGCGCAGCGGTTCCAGGTGGTGGGAGAAATAAGGAATATGCTATGCATTTGCTCAATTTATGTGGGGGTAACATTCACGAGGCAATGTTGAAGTTGATGCAACCGATACCGAAATCGCAAATGGATCAACCTCTGCAGTGTTATCAGAACAGCGAGAGTGACAAATGGTCTGCTACTGAGACTGAAGTTTTCTACAAAGGCTTGCTCAAATTTGATAAAGACTTCCAAAACATAGCTCAAGAGattggtaCAAAAACAATGAAGCAATGCATACAGTTTTACTATTTTTGGAAAAGGGTTTGCGTAGATGACTATCGAAGGTTCAAGCAAGTAAGGGAGCAGAAACAGAACACTAGGAATATTATGATGGATCTGGACTTCGAAGATAAATTATTTCCTGATGCCAAATTACTGGGGATCGTTGAAACGGGATCTCCAATGCCAAATCAAGAAAGTAGAAATTTCATCTGTGAATTTGCCGACTGTTCTGCCAGTTTTAATTCACGAGCAGCTCTGAACGGTCACATAAGAATCCACGGTGGCACAACCAGGAACTCTCCAACGCCTTCTTTTCTGTCGCAGGAGAAGAGGTCGGTATCATCGACTTCTTTATGTCATCCCGATTCGACAGAAGACTATCCTTGTAAGATTTGTGGGAAgatattttcgaaaatcaaaagtCGCAGTGCACACATGAAATCCCACAGACCAATGGACGCAGATCCTGCGAAGAAGAAAGAAAAAGATTTGCCCGCCACATCTTGTGCAACAAACATTGATATGTCCGTGCCAAAACAGTACGTCACCTAG
Protein Sequence
MWHWTVLKEVASPNKECGEPSRHTCAKVFGNASALAKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSSTTLNTASTTMSPAQGAASGDASSPHGSSCIQYAPSPTSTSGGKSQLQQLLSSEPKSGSGNNDGLTKQQLDLIHQIMEQTQRQSQSTSKPVPKPASKLVSKTPAKVQRTWSSPFLKYSILSADWLTASVTPIFKKRDKLSPHNYRPISLLSTASKVLERIVSDQITQFVLSNYVIPNEQHGFLSGGSTITNLILCINEWTKVWDQGEPVDVIYLDFSRAFDRVPHRRLLAKLSHLGIRRSVLAWIGAYLSNRFFHVRVDCSFSSPGSPLLSGVSQDYSTLRALYLQMIQKSITFSYLTSLNELNVWCGEWLLPLNVERCCVLHIGKNNPRREYFIGGDRLKQVSSHCDLGVTVSEDLRWSNNVSIITARARQLTYAIQKTFNGCDVATLKLLFTTYVRSLLEYAGPVWWPSTRADEYCLESLPQGSTNKVTSCAVSSHAKVTTTTPSTSSPATSTKPEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDTDNKKSEKKDSNAPPLQTASVSVRALIEEKIISKRSTTNNTQQASSKTSEESIKSSKAPPLFPLTVHSTTTSTNLENKNTSFVVPAPPQPSTDKSRRHSEADSFTANRATSTTQQEADTLADLILKREKVSLKRATSDPGQQQLIQFQASESFTLTYQGDDGYLSPPLQDDVFTQVQDSMLLQGVDSQQLASIQFQADSLLQDQNDQQIHDIALDEYTSIQNDSPSYQTNHSVNQDLQAVLDSPLPDSLADFSTFHTNSGLELSSSSFPNQSPAHFTNSPHATVPTPSPLQSPSIRHDSPGFAYPTPPASHEARSPCFGQNASLPLVSPKQNDFGQVPERGIDEPPQVSSPLSAAFFTSTMSSSAAVEEALEEVLPGESIAADDIYPLSDSPDPSSPVPVGLTPSPSPLSNLPSSSKPPTLTNNSGNFSVPQNFINFSMSPQYTFQSQMLPNSDDPLLSSSPKDFVTKKRIELNGVPLRLISNHGLIDLNGGNFAGILVDSNGEIKLIQTGNAPIQPKNFVITNTSIIQSSEVSSDDRNIMSVQKILKGVQCSTKQIITRPKQIIESKKEECNDVFLSPTTIPSSPAKVSRKRPRSEALQFPVLHQSKLRASRSKPQGCTTYTPQPILSPNRCGTGLYCNIKPKSEEEVNTWSNEPVPETDSTPHINVGSQFQCRIPSYMDIPDRYYRERKHEFLLWDPGIDKNTESEVDMYLEFACCAAVPGGGRNKEYAMHLLNLCGGNIHEAMLKLMQPIPKSQMDQPLQCYQNSESDKWSATETEVFYKGLLKFDKDFQNIAQEIGTKTMKQCIQFYYFWKRVCVDDYRRFKQVREQKQNTRNIMMDLDFEDKLFPDAKLLGIVETGSPMPNQESRNFICEFADCSASFNSRAALNGHIRIHGGTTRNSPTPSFLSQEKRSVSSTSLCHPDSTEDYPCKICGKIFSKIKSRSAHMKSHRPMDADPAKKKEKDLPATSCATNIDMSVPKQYVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00999090;
90% Identity
iTF_00999090;
80% Identity
iTF_00999090;