Mdis024974.1
Basic Information
- Insect
- Micraspis discolor
- Gene Symbol
- -
- Assembly
- GCA_030674115.1
- Location
- JARTUT010001319.1:449385-449693[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-08 2.8e-05 25.1 0.0 1 41 18 59 18 61 0.94 2 2 9.7 2.9e+03 -0.5 0.0 22 35 82 96 82 98 0.82
Sequence Information
- Coding Sequence
- ATGCCACGACCTAGCAGAAGGGTTCTTGGCGCTCGCCACTACAAAAACTACTCTGAAGAAAATCTCTCACAAGCTATTTCTGCTGTCAAGAATCGGCAAATGAGTTCGAGGGAAGCTGAAATTAGATTCAAAGTTCCCAGAAAaacaattctgaataaaataaaaaacaagcaCACTGAGAATGTGGGTCGCCCCACAGCACTTACAGCGACTGAGGAACGCCACTTCGTAGATGTTATCATCGCGTGTGCTGAGTACGGTTCCCCTTTAACATCATTGGATGTCAGAATGCTGATCAAAATTATTTAA
- Protein Sequence
- MPRPSRRVLGARHYKNYSEENLSQAISAVKNRQMSSREAEIRFKVPRKTILNKIKNKHTENVGRPTALTATEERHFVDVIIACAEYGSPLTSLDVRMLIKII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00998566;
- 90% Identity
- iTF_00998566;
- 80% Identity
- iTF_00998566;