Mdis008194.1
Basic Information
- Insect
- Micraspis discolor
- Gene Symbol
- lov
- Assembly
- GCA_030674115.1
- Location
- JARTUT010000437.1:1433669-1437933[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-16 4.4e-14 53.3 0.0 2 44 413 455 412 456 0.94
Sequence Information
- Coding Sequence
- ATGACAGACCAGGCCTACAGCCTGAAGTGGAGCAACCatacagaaaatataatcaCATCTCTGCAGAACCTTCTTCAAGCCGAAGAACTTGTGGATGTCACTCTGATGTGCGGCAAAGAATCAGTCCGAGCCCACCGGCTTATCCTAAGTGTATGTTCGccctttttcaagaaaattttctcGGAGACACCCTGTAACCACCCGGTGGTCGTCCTTCACGACTTCAAAGGTGATGATGTGAGAGATCTGATGACGTTTATGTACAAAGGAGAGGTCAGCGTAGAAGAATCTCGTCTACGTTCGATATTGAAATCTGCAGAAGGTCTGCAGATTAGAGGATTAGGTGAGCATTGCAAAAACTCCCCTAAGACTCCTGAACCCGTGCATGCTGTGATATACGAAGGTGATGAAAATGGATACGGAACTCAATACATGGACCAGCGCGATGCTCTATTGGCAGAATCGAAATACAAAGTGTCCTCGCCATCTCATAGAAGAAGTAGATCTCCCATCAGGTTATCACCCGTACACATGAGAACTCCCAAACAAGAGTCTCCTTCGCCTTCTCCCTCATCAAACTACGAACCAGCACCTAAACAAACTAGACGCTCTCTCATGGACATGCCTACAGCCAGATCAGAATGCCGTTCACCAACACCAAGAAGAAAACAAGCCAGACCAAGAAGATGTTCTGCAGACAATAGCATTCCTCAAGACTTATCCCTGAGCTCGCCAAGATCGCCACAACCCCAGGAAGCACAAAATTTATGCATTAAAAAATCCGAACCAGTTCAAAATACTAGAAGGGTATTTAGCTTAGAACCTTTACAACACGCGCCAGATCTGCCAAGAACACCTGAAATGGATGTGAGGGATTACAGGACCTCCCCGTTGTCCTTGCTTCATCCGCAGTTGAACTTGAACCAGGAGATGGACAATCATCCTCATCTACCATTCCCACCAATGCCGTCCGTATCAGCTTTGACCATGACACCTCCACAAGGAAAATatttcggTTTAGATTCCCAACCTTTAGGTTTATTTCCTCCAGGATTAGAAAATTGCAGAAGTAACTTTTTCGAAATGGACCACAGGGGTCAAGAACAACAAGGGGTCAAGAAAAAGAGTAAGTCAAGGCCGAGAGCAAAACGACAAAGAAAGCCTCTTTATGATGCATTTGGTAGACCAAAGGGTCAGCACTCTGCACCAAGAGGAGGGCCTCCTAGATCATGGACCAATTCCGAGCTCACTGAAGCCTTACAGCACGTATGGAATAAAAAGATGACTACCAGCCAGGCTTCTAGAGTATTTGGTATTCCTTACAATTCTCTACTGATGTACGTGAGGGGTAAATACGGTAAAAGCCTCAAGCTCGAGCAGCTCAGGAAAGACTGCATAGGTTCCCCCAACCAATCCTCAGAACACATGGCCATGAACAcatcgaataacaataacacagTTGTGAAAAGCGAAAGAGATTCTGAAACAGTCCAACCTAATACGAGGCCCCCGAGTACAGAGAATCCACCTGCACCCCATCCGGCCTCTCATCCAGCTCATTTTCTGAACCCCTTCATTTCAAGTTTCTACCAAGATTTTGGTAATTTCTCCCTTCCGATCATGCATCAGTTTCTGCCACATCCCGAAAGAGCTAGGGAGCACTTTAGTGCCCAAGCTCACGCCCAATCTCATCAGGCTCAGCACCAACCGGAAATTGAGAACAGCAACTCAGAAGCTTTAGATGAGGATACGGAAAGATTCAGGTCGCCAACGCGATCTGTCGACGAGCGCAGGGATGTAGTTCAAAACGGACAGAACTAG
- Protein Sequence
- MTDQAYSLKWSNHTENIITSLQNLLQAEELVDVTLMCGKESVRAHRLILSVCSPFFKKIFSETPCNHPVVVLHDFKGDDVRDLMTFMYKGEVSVEESRLRSILKSAEGLQIRGLGEHCKNSPKTPEPVHAVIYEGDENGYGTQYMDQRDALLAESKYKVSSPSHRRSRSPIRLSPVHMRTPKQESPSPSPSSNYEPAPKQTRRSLMDMPTARSECRSPTPRRKQARPRRCSADNSIPQDLSLSSPRSPQPQEAQNLCIKKSEPVQNTRRVFSLEPLQHAPDLPRTPEMDVRDYRTSPLSLLHPQLNLNQEMDNHPHLPFPPMPSVSALTMTPPQGKYFGLDSQPLGLFPPGLENCRSNFFEMDHRGQEQQGVKKKSKSRPRAKRQRKPLYDAFGRPKGQHSAPRGGPPRSWTNSELTEALQHVWNKKMTTSQASRVFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGSPNQSSEHMAMNTSNNNNTVVKSERDSETVQPNTRPPSTENPPAPHPASHPAHFLNPFISSFYQDFGNFSLPIMHQFLPHPERAREHFSAQAHAQSHQAQHQPEIENSNSEALDEDTERFRSPTRSVDERRDVVQNGQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00998931;
- 90% Identity
- iTF_00998931;
- 80% Identity
- iTF_00998931;