Mdis029201.1
Basic Information
- Insect
- Micraspis discolor
- Gene Symbol
- bab1
- Assembly
- GCA_030674115.1
- Location
- JARTUT010001740.1:14318014-14332500[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-10 1.5e-07 32.4 0.0 1 35 52 87 52 92 0.93 2 2 3e-16 9e-14 52.3 0.0 1 43 216 259 216 261 0.95
Sequence Information
- Coding Sequence
- ATGTTGAACGCAAGAGGGCATGGAGCAGAAAAGATGAACCGGCTCAAAGCGTGTCAAAAGCCAACATTCACCAAAAAAAGttTTTTCTTAACCCATTTATTTTTGTCCCAATTAGATTATCCCACATTATTAAAGCTTAAAACACCGACATGGACCCAGGATCAACTGAAAGAGGCAATCGAGGCAGTTGTTACGCAGAAAATGCGTTTTACACAAGCCTCCACCAGATACGGAATACCAAAAGGCACTCTTTATGACAACATTCTGGGCAAATCGAAAAGGATGGCGGTTCTTGAGGAAGCCGGTCTAACAGCGGAGGAAGAGAACGCAGTACTTGAATTCTGCTGCGACGTGTCTATCTCTCCATACAACAGAAGAACAAAAAAATCTTTAAATTCTGTTTTAGGTTTCGTGGAAAAGCTGAGAAGATTGAGAGATCCTGAATTTTTATTCACGGGATTGTCAGGTTTCAGATGGTGGTGGGCATTTTGTAAAAAGCACAGTATTGTGTCTTTACACTACGAAAACAGCATAAcAGATAGCTACCAGTACCAATTGCAATCCATGTGGCAGAAGTGCTGGAACACAAATCAAAGCCTTGTTCATCACCTCCGATTCAGAGAAAGAGGCCCTTTGAAATCGTGGAGACCAGAAACGATGGCTGAAGCAATCTTCTCGGTATTGAAGGAAGGTTTATCGCTTTCCCAGGCAGCTAGGAAATACGACATTCCTTACCCCACTTTCGTACTTTATGCTAATCGAGTGCACAACATGTTAGGACCTTCGGCTGATGGTGGATCAGATCTCAGGCCCAAAGGTCGAGGTAGGCCACAGCGTATACTCCTTGGAATTTGGCCTGATGAACACATAAGAGGAGTTATCAGAGCGGTTGTTTTTAGAGACTCCCATCATATCAAAGAAGAACAACAAATTCATTACCCCAGACTTCATGAGTCGGCGGATGTCTTGGCAGAGGCTTTCGCGGGTGTGTACGGCTTGGAGCCCAAAGGTCCAATTCCAGAAGTAGAGATGCCAAAAGTAGCAGCAGAGTTGAACCAGGTTTCTATAGACGAGGATTTGGTACTCAAACATCTTTTAGACATCAAAACATCATCCTCTCCTGGTCCGGATGGGCTTTCACCGTTCTCACTGAAAAAGTGTGCATCAGCTCTTGCCCTTCCTCTAGCTATCATGTTCAAGAGATCACTGGACACGTCCAGTCTACCTGATGATTGGTTGAAGGCGTCGGGATCCGTGCTGGGTCCTGCTCTCTTCCTGCTATATACGTCAGACCTGCCAAGATTGTTGAAATCTCAGTGTGCCATGTACGCTGATGATTTAAAAATTTACAATTCTGCTTCCAGCTCGAGAGACTTGTACGAAGATCTATGTATGGTGAGTGATTGGTGTAGGAAGTGGCTGTTGCCCGTAAACGCCAACAAGTGTTGTGTGCTACATCTCGGCAGGAAAAATCCAGAATATCTGTATAGGATCGATAATACCCCCCTCGTTTCTGTTGACTATATGAACGATTTGGGTGTTGTTGTAGATAAAAATCTGGGTTGGACACGACACGTTGCGAGTGTTTCTGCTAGGGCAAGGAGATTGACCTATATGATACAGAGTGCCTTCAGACAATGCAGTTTAGAAACATGTAAGCTGCTTTATTGTAGCTATGTCCGTCCTCTAATGGAGTACGCTGGACCTGATTCCGTCAGCAATGTCAACACATCTGGTGTGAACACCACTGGAACCACAGCTAATATCCAAAACTTCCCAAATTCATCATGTAATGACGCTTCAGATCCGAATTCGTCCACGGCAGCGGCCGCAGCAGCAGTGGCGGCTGTGGCGCAAGGGCTACGACAACAAATGTGCAGCATGGTAGCGGCAGCAAATCAGAGCTCTGGTCACGAAACAAATCCCGTAGCGAGTTTAGTGAATTCTCTCGCATTTGGTAACGCCTGCGGGAACATGCAGAACAACGGTTCTCTACCAATGGGCATGATGCCATCCATGAGCCACATAACCTCTTTACGGAGTATAAGTAGTCCTGCAGGTTGTATACAAGACCTTAGGATAAGTCCATCAGAGTCGGCTTTAGAAAGTCCCATTTCTTCCCCATTAGGCTTATCAGTTCCAAGCTCGATGGAACAGACCATGAACTTATCTTTGTCCCACAACATGAACACTACTAGTGCGCCGGGTGTTACGGGTATGACGTACAAATCCTCGCGGCCCTACTCGTCACCTAGACCTGAAAATCTCTTCCAAGAAGATATTAATGATCTGGTGAAACCAATCAATTCTTCCACCCCCAACTCGAGGGAAGCATCCATGCCTATCAAACTGGAACCAATGACAGAATGTCGAGGCGAATGA
- Protein Sequence
- MLNARGHGAEKMNRLKACQKPTFTKKSFFLTHLFLSQLDYPTLLKLKTPTWTQDQLKEAIEAVVTQKMRFTQASTRYGIPKGTLYDNILGKSKRMAVLEEAGLTAEEENAVLEFCCDVSISPYNRRTKKSLNSVLGFVEKLRRLRDPEFLFTGLSGFRWWWAFCKKHSIVSLHYENSITDSYQYQLQSMWQKCWNTNQSLVHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGIWPDEHIRGVIRAVVFRDSHHIKEEQQIHYPRLHESADVLAEAFAGVYGLEPKGPIPEVEMPKVAAELNQVSIDEDLVLKHLLDIKTSSSPGPDGLSPFSLKKCASALALPLAIMFKRSLDTSSLPDDWLKASGSVLGPALFLLYTSDLPRLLKSQCAMYADDLKIYNSASSSRDLYEDLCMVSDWCRKWLLPVNANKCCVLHLGRKNPEYLYRIDNTPLVSVDYMNDLGVVVDKNLGWTRHVASVSARARRLTYMIQSAFRQCSLETCKLLYCSYVRPLMEYAGPDSVSNVNTSGVNTTGTTANIQNFPNSSCNDASDPNSSTAAAAAAVAAVAQGLRQQMCSMVAAANQSSGHETNPVASLVNSLAFGNACGNMQNNGSLPMGMMPSMSHITSLRSISSPAGCIQDLRISPSESALESPISSPLGLSVPSSMEQTMNLSLSHNMNTTSAPGVTGMTYKSSRPYSSPRPENLFQEDINDLVKPINSSTPNSREASMPIKLEPMTECRGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -