Marg023527.1
Basic Information
- Insect
- Metopia argyrocephala
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_963576795.1
- Location
- OY756210.1:64946874-64949938[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 4e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 19 0.13 2.6e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 19 4.2e-08 0.00084 20.4 15.7 1 18 206 222 206 223 0.98 4 19 2 4e+04 -5.4 2.5 6 10 249 253 248 253 0.81 5 19 1.2e-05 0.23 12.6 13.5 3 19 261 278 259 278 0.91 6 19 1.2e-07 0.0024 18.9 11.9 1 19 313 331 313 331 0.99 7 19 1.8 3.6e+04 -4.0 0.2 13 15 347 349 346 350 0.70 8 19 0.9 1.8e+04 -3.0 0.5 1 7 356 361 355 363 0.49 9 19 1e-08 0.00021 22.4 13.0 1 18 366 383 366 384 0.97 10 19 0.71 1.4e+04 -2.7 0.4 1 5 393 397 393 402 0.73 11 19 0.00015 2.9 9.1 16.5 1 18 418 435 418 436 0.98 12 19 1.6e-10 3.1e-06 28.2 14.5 1 19 445 463 445 463 0.98 13 19 0.053 1.1e+03 0.9 9.9 9 19 508 518 499 518 0.89 14 19 0.02 4e+02 2.3 5.4 1 12 530 540 530 540 0.95 15 19 0.99 2e+04 -3.1 0.6 6 10 599 603 598 603 0.86 16 19 3.8e-06 0.076 14.2 5.7 1 12 609 620 609 620 0.97 17 19 1.6 3.2e+04 -3.8 0.8 5 10 635 640 635 640 0.87 18 19 0.00012 2.4 9.4 14.9 1 18 648 664 648 665 0.93 19 19 1.9e-06 0.039 15.1 11.6 1 18 716 735 716 736 0.91
Sequence Information
- Coding Sequence
- atgccgcaaacaaaaataaaacaagaaaatttaatgaaagATTCTACTCAGAAATTTAATGAGACACATGCCAGAAATATACAAGTGgccaaaaaaattgttgaaaattatGTTTCGTCTTCCGAAGATGAGGATGAATTGGATGAGAAAACAATCTTAAaatctttatataaaaattataaggcACGTAAAGAAGACGAGCATTTACTTGCAAAAACAGCCGGCTTTTTGGAAAATATTCTACAATCGGGGGCAGCTACATGTCTCATTTGCATTGGAAGCATCAAACGTTCCAATGCAATATGGTCTTGCAAGTATTGCTACTGTTTTTTCCATTTGAACTGTATACGAAGGTGGGCCAACGACAGCATGGCTCAGGCAAAGGCTCAAACACAAAATGATCAAGGCTATTATAACCATATGGGAGAATATGTTCCACCAAAAAACACTAAATCTTTGCATTGGTGTTGTCCACAGTGTAGACAAGAATTTCAGCCGGAGGAAAAGCCTGTGGAATATGAGTGTTTTTGTGGGAAAGAAGCAAATCCACCTTTACAGCCTTGGTTAATTCCACATTCTTGCGGTGAGATATGTGGCAAATCTTTACAACCAAATTGTGGCCATAAATGTACTATACTGTGTCATCCTGGACCATGTCCACCATGTGCTCAGTACGCCGTGACTTCTTGCAAATGTGGCAAATCAGCGCCAAAATCTATGCGCTGTGCTGAAAAATTTTGGCAATGTCAAGAAGAATGTAAGCTGCTTCTTCCGTGTAAAGAACATAATTGTAAAAGCATATGCCATAAAGCAGGACAATGTCCACCATGTCAACAAACAAGCATGCAGCGTTGTGAATGTGGTAGAGAAATAGCAAAACGGAAATGTTGTGAACTGAAGTGGCATTGCAAAAAAAACTGTGGCAAAATGTATAACTGTGGGTTGCACATTTGTAGAGAGGTTTGCCATTCCGGTGAATGTGGGGATTGTCCATTAAGCTTGCCGCGATCATGTCCATGTGGTAAAACAAAAAAAACTGGTCCTTGTTCGGAAGTAATTGATACTTGTGGTGATACTTGTCAAAAGTTATTGGCTTGTGGTACACATACTTGCAGCCAACGGTGCCACAAGGGAAATTGCAATACatgtttaattattacaaaaaagaaatgtcGTTGCGGATTGCACGAAAAAGAATTACCATGTTCTAAAGATTTTGCCTGTGAAACCAAATGCAAACAATTAAGAGATTGCGGTAAACATCCATGTAATCGCAAGTGCTGCGATAGAAACTGTCCACCATGCGATAAAGTTTGTGGAAAGCCATTATCGTGTGGCAAACATAAATGCCAATCGATTTGCCACAAAGGTCCCTGTTACCCATGTCAGCAGCAATCGCAAATTAATTGTCGTTGtggcaaaaccaaaaaaaatgtaCCCTGTGGTAGAGAGCGTTCTGCGCGTGTTATATGCTTAGAATCATGCCGAATACCATCAAAATGTCATCATTATAATAAACATCGTTGTCATAAAAATGAGTGTCCACCTTGTTCTCAACCCTGTGGTTTGCCAAACGATACCTCACAATGCGGCCATATATGTATGGTTAAATGTCACACTTCAGTTAAGGTAGCAAAAAAATCAAATCCAAGCACCACAAATATATGGGAGCCTACTAAGCAGTTTGAATTTAAACAATTGCCTCATCCACGTTGTGAGCAAAAAGTTAGCGTAACATGTATTGGTGGCCATGAAACATCTGAATGGCCTTGCTGGAATTCGAAGCCTTCTTCTTGTCAACGCATGTGCAATCGTTCCTTGCGTTGTGGAAACCACAAGTGTTCTTTAGTTTGTCATTCTGTACCGGATTTAAAAGACATGAAGgaACAACCTGGTTGTGCTACTTGCGAAGAGGGTTGCTCTATTCCACGACCTAAAGGTTGCTCACATAATTGTGCTAGACCATGTCATCTACCCCCATGTCCCCCCTGCAATGTTGCTATTAAAACTAAATGTCACTGCAGCTTAATGCCTATTGTCTATAAATGCAGTGATTATTTTAACACTGAAGGTACTGAAGGTGAAATTTTAGAAAGACAAGAAAATCTAAAAAGCTGTGGAAATAgatgtttaaaaaatTATTCTTGTGGTCATCGTTGCTTAGCTAATTGTCATTCTGGTCCATGTCCATATCCAGAATCCTGCCGAAAAAAGTTGCGAATTTATTGCGATTGCAAATGCTTGAAATCCGAAATTTCTTGCGACAAACACCGTGCTGGCTTGCACAAATTGCAATGCAATgaaaattgtgttgaaaataaaaagaatattgaaGAAGCTCGTAAAAGGGAAGAGGAAATGCGACGCAAGGAAGAAGACGAACGTAATCGTTTGGAAGTTGAGCAATTCGAGAAGAAGTTTAGTAAACGAAAGCCTAAAGAACGCAAAACAGTAGATgtgaaacagaaaaattcaATTAACTGGAAAATTATTGGTGTATACGTTAGTATTCTATTTGCTCTCTTATTAGCAGTCGCTTTAGCCGTCTATGAAGAGAATTAA
- Protein Sequence
- MPQTKIKQENLMKDSTQKFNETHARNIQVAKKIVENYVSSSEDEDELDEKTILKSLYKNYKARKEDEHLLAKTAGFLENILQSGAATCLICIGSIKRSNAIWSCKYCYCFFHLNCIRRWANDSMAQAKAQTQNDQGYYNHMGEYVPPKNTKSLHWCCPQCRQEFQPEEKPVEYECFCGKEANPPLQPWLIPHSCGEICGKSLQPNCGHKCTILCHPGPCPPCAQYAVTSCKCGKSAPKSMRCAEKFWQCQEECKLLLPCKEHNCKSICHKAGQCPPCQQTSMQRCECGREIAKRKCCELKWHCKKNCGKMYNCGLHICREVCHSGECGDCPLSLPRSCPCGKTKKTGPCSEVIDTCGDTCQKLLACGTHTCSQRCHKGNCNTCLIITKKKCRCGLHEKELPCSKDFACETKCKQLRDCGKHPCNRKCCDRNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCQQQSQINCRCGKTKKNVPCGRERSARVICLESCRIPSKCHHYNKHRCHKNECPPCSQPCGLPNDTSQCGHICMVKCHTSVKVAKKSNPSTTNIWEPTKQFEFKQLPHPRCEQKVSVTCIGGHETSEWPCWNSKPSSCQRMCNRSLRCGNHKCSLVCHSVPDLKDMKEQPGCATCEEGCSIPRPKGCSHNCARPCHLPPCPPCNVAIKTKCHCSLMPIVYKCSDYFNTEGTEGEILERQENLKSCGNRCLKNYSCGHRCLANCHSGPCPYPESCRKKLRIYCDCKCLKSEISCDKHRAGLHKLQCNENCVENKKNIEEARKREEEMRRKEEDERNRLEVEQFEKKFSKRKPKERKTVDVKQKNSINWKIIGVYVSILFALLLAVALAVYEEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313435;
- 90% Identity
- -
- 80% Identity
- -