Basic Information

Insect: Metopia argyrocephala
Gene Symbol: pho
Assembly: GCA_963576795.1
Location: OY756210.1:61922792-61924675[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.00082 0.1 14.2 4.1 1 23 469 493 469 493 0.97

2 4 9.5e-07 0.00012 23.5 0.8 1 23 498 520 498 520 0.97

3 4 8.8e-05 0.011 17.3 0.7 1 23 526 550 526 550 0.97

4 4 5.2e-06 0.00063 21.1 5.0 1 23 556 580 556 580 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.00082	0.1	14.2	4.1	1	23	469	493	469	493	0.97
2	4	9.5e-07	0.00012	23.5	0.8	1	23	498	520	498	520	0.97
3	4	8.8e-05	0.011	17.3	0.7	1	23	526	550	526	550	0.97
4	4	5.2e-06	0.00063	21.1	5.0	1	23	556	580	556	580	0.98

Sequence Information

Coding Sequence: aTGATGAATTGTCATAATTTCGGTTTGGGCTCTACTAATAGTAGCTCCGCGCCCATTGTGAATAATTTATCATTGGCATCGGCTGCAGTACCAGTGTCATCACAACACAATGTTACTACTTCtcctttatattttactcaCATCTTACCTACATCCACTAATGTCAATACCTTAATTGAGTCGCCTTATGCCACAGATTTGGAGGAACAAATTGGTGCAGGCGGCTGTCCAGCTGTGGGGGaaagttttttaatagaagAAATTATTGATGAGCGTGATGAAGAGGGAAATATTGTAATTGATCCTGGGGAATTTTTTATATCTGGCGATAGCATACAATATTATGCCGTTCCTGAAACAATGCCTCCACATATAATCATGCAACCGTCCTCTTCAGCATCTTCTTCATTAGATTCGTTAACAGCTGCTGATTCTTTTGCTTATACAACAGAAAATGTTATTCATCTTAATGAAAGTGGAGCAGACGAAATATTACCAGAATCTTCCGAAACAAACGCTCCAGTTTTTGATGAATATGTTACCCAACTGAATTTAGAAACCAATGACTTCAATATTTCTGCATCTAATCAACCTGTAGTAGCTGATAATATTAAAATGGAACATGACGATGTGGACAACAACACTTCTAACTCATTGAcggtaattaaaaaagaaaagtcgGAGAATCCAGATGAGGGacgtaaagaaacaaaaatgcgCTTaacggaaaaattaaaaaaatcgcaGACTACAAAGCGCTGGAAACAAACTAAGGTTCCCATACGTATAACTCAAGATGAATTTAATGTCACACTTTGGTCAGCTCTTAACTCTGAAGATGAAGAGGATGATGAAGATGATCAAAATAACCAATCTGCCATTGATAATTAtgatattgataaaaaaatagaagaagacACAAACACTCTGAAATCTGGCGAAATTATAACGCCAGATTCTTTAACTGATATTATGGTGGATGAGCAACATGTAAATCGTCTGTTATTGGATGAAAGGCACACTAAAATTCATATCCAAGAAGGACTTTCACCCGCAGAATACGTTATTGTGCCCGATCCTTTTACTGGCGACATCGTCGAAGAAGAAGTAGAAACTGTTAATGAAAATCTAACTGGCAATATGAAATCAGAAGAACACACTTCACAGACTCAATTGAATACACTTGTTGTAAACCAACGAAGTACTAGGAATGAAGCTTCTTTACAGGCATGTTCAACAATAGCTCAACCAAAAATCGATTCAAACGTCAAActgaaaaatattcaattaaataagcaattaggtgcaacatataaaaaatcaagCGAAAATACAACAACACCATCGTCGTCATCATCAACAACCTCTTATACAACTGCATGTGCTTCAGGGACAGTAACTGTTTTTCGTTGTACATTTCGTGACTGCAACAAGGAATTTCGTAATCATTCAGCCATGCGCAAACACTCTGCTACTCATGGACCACGGGGTCATGTGTGTGCAGAGTGTGGTAAATCGTTTGTTGAGAGTTCTAAATTAAAACGTCATCAATTAGTCCATACGGGTGAAAAACCATTCGAGTGCACATTTGAAGGTTGCGGCAAGAGGTTTTCACTTGATTTTAATTTACGTACGCACGTTCGAATACATACAGGTGATCGACCGTACCATTGTCCTGTTGAAGGTTGTCACAAATGTTTTGCACAGTCTACCAATCTAAAGAGTCATATGCTGACCCATTCAAAGCCGAAACGTAAATGGCCTCGGCCAGTGAACAATAAACCATTGTTAGCACGTTATGGTCGCCTGGAACTGGGCGAAAATCCAGATTTAGTATACTTGGAAACAAATGAGCAGTATAGTTCTAATTTAGATAGTTCATAA
Protein Sequence: MMNCHNFGLGSTNSSSAPIVNNLSLASAAVPVSSQHNVTTSPLYFTHILPTSTNVNTLIESPYATDLEEQIGAGGCPAVGESFLIEEIIDERDEEGNIVIDPGEFFISGDSIQYYAVPETMPPHIIMQPSSSASSSLDSLTAADSFAYTTENVIHLNESGADEILPESSETNAPVFDEYVTQLNLETNDFNISASNQPVVADNIKMEHDDVDNNTSNSLTVIKKEKSENPDEGRKETKMRLTEKLKKSQTTKRWKQTKVPIRITQDEFNVTLWSALNSEDEEDDEDDQNNQSAIDNYDIDKKIEEDTNTLKSGEIITPDSLTDIMVDEQHVNRLLLDERHTKIHIQEGLSPAEYVIVPDPFTGDIVEEEVETVNENLTGNMKSEEHTSQTQLNTLVVNQRSTRNEASLQACSTIAQPKIDSNVKLKNIQLNKQLGATYKKSSENTTTPSSSSSTTSYTTACASGTVTVFRCTFRDCNKEFRNHSAMRKHSATHGPRGHVCAECGKSFVESSKLKRHQLVHTGEKPFECTFEGCGKRFSLDFNLRTHVRIHTGDRPYHCPVEGCHKCFAQSTNLKSHMLTHSKPKRKWPRPVNNKPLLARYGRLELGENPDLVYLETNEQYSSNLDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -