Basic Information

Insect: Metopia argyrocephala
Gene Symbol: wdn
Assembly: GCA_963576795.1
Location: OY756211.1:107748025-107752613[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.3 1.6e+02 4.1 0.7 1 19 303 322 303 325 0.93

2 8 2.5e-06 0.0003 22.1 0.7 1 23 329 351 329 351 0.99

3 8 0.091 11 7.8 1.8 2 23 363 383 362 383 0.93

4 8 4.3e-06 0.00052 21.4 1.0 3 23 391 411 389 411 0.98

5 8 3.3e-05 0.0041 18.6 5.1 1 23 417 439 417 439 0.98

6 8 0.00032 0.04 15.5 3.0 1 23 445 467 445 467 0.97

7 8 8e-06 0.00098 20.5 0.8 1 23 473 495 473 495 0.96

8 8 0.00015 0.018 16.6 2.3 1 23 501 524 501 524 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.3	1.6e+02	4.1	0.7	1	19	303	322	303	325	0.93
2	8	2.5e-06	0.0003	22.1	0.7	1	23	329	351	329	351	0.99
3	8	0.091	11	7.8	1.8	2	23	363	383	362	383	0.93
4	8	4.3e-06	0.00052	21.4	1.0	3	23	391	411	389	411	0.98
5	8	3.3e-05	0.0041	18.6	5.1	1	23	417	439	417	439	0.98
6	8	0.00032	0.04	15.5	3.0	1	23	445	467	445	467	0.97
7	8	8e-06	0.00098	20.5	0.8	1	23	473	495	473	495	0.96
8	8	0.00015	0.018	16.6	2.3	1	23	501	524	501	524	0.98

Sequence Information

Coding Sequence: atgaaagaaGAAGCAGAGGCAAGTAGTAAATTGCCGCCTAAAATAATGGGTGGTGTTGGCGGTTCACCACCAATGTTAAGAACCACTAACAATTCAGTAAATATTTCCAACTCTGGTCAAAATTCAAGTACCCCACAAAAACAACAGAGCGACGAGATCCTTAGTACGTTATTGCGTATGAATAACTTTGACTCGATATCGAGCATTAAAGACGAATCGCTGGATATTGACTTGTCCGCGTGTGTTACAATAAGTGGAGATCCCTCGGGTATCATAGGGGGTAATAGCTTATCATCGTCGGACTTTTGGCGTGTATTGGATGAAAGTGCTCAAACGTCACAATTAGATATCGGCAACAGTAGTGTAGTGTGCGGCGGTGGTGGTAGTAACAGTTGTAATACCAGTCGGGAGTCTCTGCAGGTCTCACCAACTGCCTCTAGTAATGGAAATTCATTGTTATCAAATgagaaaaatgatttaaaagtggTAGTGAAAAAAGAACAGACAGATTTTAGTGGAACATTTCTTAAGCCTTCAACTGGCATAACATTCTCTCCGTTAAAACGCATCATTAAGACTCAGCAGgtggaacaacaacaacaaccacataTACGTAAAGACAAATCACCAACTAGATTGTCTAAATTTCAGGATACGGGACCACCATCTCTAGCTCCTATTATGAGAATACATCAAACATATATTAAGCCTCAGGTGGAATTGCCAAAGTTAAATAATGGTAGTCTTACAACAATAACAGCTGGCACTGCAGGCACAAATCTAATGACTAATaagcaacaaataaaagaaacattaGTTGGAACACAACCTCCTCCTTTGGCAGCCTTATTAGACACCAGTGCAAGTAAAGAGCCAAACGTAGTGAAACCTTTACCCGAACCCATATACAAGTGTTTGGATTGCAATAATATCATATTTCGTGGTAGACAGGAATTAACTAAGCACTCAAATCATCGCTTAGTCTATAAATGTCCAGATTGCGAAAAGGAATTTGATGTTGAAACATCATTGAAGAAACATTTGAAAACACATCGTCCTATTGATGCACGGAAGGATGCTTGGAAAAAATGTCCTGATTGCGGAAAGTgCCTTAAACTTGGTAGCATGTGGATGCATCGTAAAATTCATActgaaaacaagaaatatggCTGTGAGATATGTGGCCAGAAATTCgtacagaaaataaatttaacacatCACCAACGTATACATACCTCAGAAAAACCATATGAATGTTCCGAGTGCCAGAAACGTTTCCAAGAACGTAGTCATTTGCAGCGACATCAAAAATATCATGCTCAGACTAGATCTTATCGTTGTGAAAAATGTGGCAAAATGTATAAGACAGAACGTTGTCTTAAAGTTCATAATTTGGTGCATCTGGAACAAAGACCATTTGCCTGTACCGTATGCGACAAATCTTTTATATcgaattcaaaattaaaacagcattcaaatatacatacagGTGAACGTCCATTTAAATGTAATTATTGTCCTAGGGATTTTACCAATTTTCCCAATTGGTTAAAACATACTAGACGTCGCCATAAAGTAGATCATAAGACTGGTGAAATGTTGGAAAACATACCATCGTACTGTTCAAAGAAGTCGACACGTACgccaaaagaaaagaaaattcctGAAGTAAAGAATGCCAACAATAATAATACGACGGCGGTAGCATCCACAGGTACTAAGAACACTCCCACAAACACAGTTCAATTAACAACGAACACAAAAACGACTGATCTCAATAATGTGGacacaaataaattacaattgcaACAACAGCAAATTATAACAACATATACTACTGCGCTAACTACTAATACTACAACTGGCATAGTTACCAGCACAGTACCAAGTAATGTTTTTACAACAATCACCTTAACAAAACCTTTGCTAGTAGCCActagcaataataacaacaccATCGGTAGTAGTCAGTTAGTGATTAAACAAAACGGACCTCCGCCGTTGGCTAAAGTGCCGGTAAAAcgtaaaaagaaacaaacaccGAATCCTGTGGTAACACAAATAGCAAAAACAGATACTGTTACCTCACCTTCAACCACCACAAATACCCCAAACTTTTTGGTGACTACATCCTCATTAAATTTGCAATCTACTACTAGTAGTGGTACAGGTAGTGGGCCGCCACCTTTAGCCTTGGTGTATAACAATAAAGCCTTGAGCATAAATAGCAGTGTTACTCTTTCCTTAACTAGTTCgacaaatactttaaaaacatctaatcaacagcagcagcaacaaataATGCGTGCACCACAACAGCAGCCACTAAAAATAGAGAAAGTTAAGAGAGAAAGGAAGCAACCGACACCAAAGCAAGTTCAACAAGTCCCTCCTCcactaattattaaaaaagaatttattgaaCCAAAAATTGAACACAATAATATACAATCTCAAGAACAGCGACAGCAACAACAGCTTTTGTCACAATGCACACCGCaaacaacacaacaacaacaacatcagcaaCAACAGCTTCAGTCACAGCGTTTACAAACTCAACAACCTCAAACTCAACAAACCAAAGTAGCATCTTTTACCGACTTACATTGTTTAAGTATCACTTCAGCCgaggaattaataatggaacaGGCTTTGGAAATGGAAGAATGTGGTCTATACAAAGCGTCTGCTCCTACAACGCTTGTGTCTACTTTTGGCGATACCGATAATGCAATATCATCTGATTCAATGGCTAATttacatttcaaaataaaagaagaacatCATGATATGgatttaaaactgaaaacagAAGAATTTgACTCCATTAAGAAACAGTCCATATGCTCATCATTGGAATCTTCACCATTTTCCTCACCTGCCTCTATGGAATTTGCTGCCACTTCAGCATTATCAACGGATTTTACgacaaataatttctatttaccACCATTTACCATTTCCAATAATCAAATAATTACAACAAATGCTCCTATTACTACAATGCGCATAGAGGATTGCCGAGGGACGGTGGCAACGTCGCATACTTATTTGCCGCAGTTAATAACAACAAATGTTAGTGTGCCAGAGCTTATACAAATCAATAACAATAACCAGCGATATTTAAAAGCCACCAATAGTACTATCAGTGCTAGTGGTAATACGAATCCAACATTTATAAATCAACTATACTTGCCATTAACGGTTAATGCTGGTCCCGTTTTGATGAAATCAAATCAAGCTTTACCCTCCGTTGATAcccttttattttcaaattcaaaattggGACTCTTCAATAATCGCAATTTACCAAAACAAGCCACAACAGCTCAACATAATTTATCCTAA
Protein Sequence: MKEEAEASSKLPPKIMGGVGGSPPMLRTTNNSVNISNSGQNSSTPQKQQSDEILSTLLRMNNFDSISSIKDESLDIDLSACVTISGDPSGIIGGNSLSSSDFWRVLDESAQTSQLDIGNSSVVCGGGGSNSCNTSRESLQVSPTASSNGNSLLSNEKNDLKVVVKKEQTDFSGTFLKPSTGITFSPLKRIIKTQQVEQQQQPHIRKDKSPTRLSKFQDTGPPSLAPIMRIHQTYIKPQVELPKLNNGSLTTITAGTAGTNLMTNKQQIKETLVGTQPPPLAALLDTSASKEPNVVKPLPEPIYKCLDCNNIIFRGRQELTKHSNHRLVYKCPDCEKEFDVETSLKKHLKTHRPIDARKDAWKKCPDCGKCLKLGSMWMHRKIHTENKKYGCEICGQKFVQKINLTHHQRIHTSEKPYECSECQKRFQERSHLQRHQKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACTVCDKSFISNSKLKQHSNIHTGERPFKCNYCPRDFTNFPNWLKHTRRRHKVDHKTGEMLENIPSYCSKKSTRTPKEKKIPEVKNANNNNTTAVASTGTKNTPTNTVQLTTNTKTTDLNNVDTNKLQLQQQQIITTYTTALTTNTTTGIVTSTVPSNVFTTITLTKPLLVATSNNNNTIGSSQLVIKQNGPPPLAKVPVKRKKKQTPNPVVTQIAKTDTVTSPSTTTNTPNFLVTTSSLNLQSTTSSGTGSGPPPLALVYNNKALSINSSVTLSLTSSTNTLKTSNQQQQQQIMRAPQQQPLKIEKVKRERKQPTPKQVQQVPPPLIIKKEFIEPKIEHNNIQSQEQRQQQQLLSQCTPQTTQQQQHQQQQLQSQRLQTQQPQTQQTKVASFTDLHCLSITSAEELIMEQALEMEECGLYKASAPTTLVSTFGDTDNAISSDSMANLHFKIKEEHHDMDLKLKTEEFDSIKKQSICSSLESSPFSSPASMEFAATSALSTDFTTNNFYLPPFTISNNQIITTNAPITTMRIEDCRGTVATSHTYLPQLITTNVSVPELIQINNNNQRYLKATNSTISASGNTNPTFINQLYLPLTVNAGPVLMKSNQALPSVDTLLFSNSKLGLFNNRNLPKQATTAQHNLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -