Marg003704.1
Basic Information
- Insect
- Metopia argyrocephala
- Gene Symbol
- -
- Assembly
- GCA_963576795.1
- Location
- OY756208.1:86006739-86016510[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.0031 0.38 12.4 0.2 1 21 1111 1131 1111 1135 0.91 2 8 0.021 2.6 9.8 5.4 1 23 1562 1585 1562 1585 0.98 3 8 4.4e-06 0.00054 21.4 1.9 2 23 1612 1633 1612 1633 0.97 4 8 0.00016 0.02 16.4 1.9 1 23 1639 1661 1639 1661 0.98 5 8 3.2e-06 0.00039 21.8 0.7 1 23 1667 1689 1667 1689 0.99 6 8 0.00084 0.1 14.2 0.7 1 23 1695 1717 1695 1717 0.97 7 8 0.00076 0.093 14.3 0.0 3 23 1725 1745 1724 1745 0.97 8 8 0.0014 0.17 13.5 4.1 1 23 1751 1773 1751 1774 0.96
Sequence Information
- Coding Sequence
- atgttacCATTTATCGAAAAtcataacaaaaaatttgcaCACCTGCCCGCTCAAATACCCGATCATTTGAAATGCGGCGAAGTGTATACTTGGCTATGTAATGGCGAATTATATGCGGTTGAGTGTGTGTTATGTGAAGATAAGCCATTATGTCCACTCTCAGAATTTCCACAACATATGGAAGTTTGGCATACCGATTGGGAGGAATACAGTGAAAGCAATAGCATAACAAAAGAACAACAAGAAGATAATTTCTTCGATAGTGATGATGATGAAGACAATGCTTCATTGTCTTTTAATACTGAAGACAGTGGTTTATATGAACAAGACCATATTAATGAGGGGGAAGTTCTTGAACCTTTTGAGCAGGTTTTAATAGAACAAGACGAAACGACTATAAATTCTATACAAATTAATGAAGATGTTGATGTAGACGTTAACGAAATCttcacaaaagaaaacaaaacagcaCTCTTACCTGCTGTAGTCGATGTAAAAGGTGAAATCATGCTTGAACAGATCGAACAGCCTAAACAAAAcaacataaacaaaacaataacagagCAATGCAATAACAAATATACACAAACAAGTAAACAACAGTTACATCAAATTGAACTGAGTGAAATGAATGGAATGGTACACACCAGAGAAAGGGAACTGGAAactaaagaaaaacacaaagaaattgaaaatagtAAAAATCCTAATAATATGTCACACACTAACAAAGATGTAACAACGTTATTGGCAACtaaaaacctaaaaagaaattgcgataaaaatcataaaagagAACTCTGCAATTTCTTTACTTATATTAGAGATTCACAAAGAATAAAAGATAATTTCTTAGAAGATAATAATCTTGTAACAGAAAACCCTATATCgagtaatacaaaatttatagaaGAGATTtctagtgaaaataaaaatataccacAGCAGCAAGTACAAGATTTAGGTGATATAGTAAAGAAATTGGAAGAAAACGAACATTTCCTACTAGAAAAAACTGTAAGAAGTAATTTAGAATTAAGCAGCACACCAACTAAATATATGATTGATATAGAGGAGAAATCTCAAGCCCATGATAATCTCTTACATgttgaaacaaatttaaaagagtGTTCTCTAGATAGCATAAGAGAATCAATTGATCTGCAAGAAGACTTATTAGACAATAAAAGTATCAACCAAGAACTACGGCATACCAGTAATTTAGCAGAAAATTCAATTGATCTTAAGATACCTCAACAATGTACAAACATTTTAAGTGATCGAGAAGATAATTGTTCACAACATactgaaagaaatttaagagaATTTGAGGAAGTATTCACTCAGTATGTACAACATCCAAATAATCCCCAAAATTTTGAAAGTACAACTCAAAACAGTCAGAATGCAACAGAAACTAATTCTTTTGGACAAGATTTAGACAATTTTAAAGATACGAAAGAGAACACTACAGATCAAACTGTTGAAAAATCGGGACACACTATACAACATTATCCACAAAGCTTATACGttcagcaaaaacaaaaagattattttcaaatgcaaaaaAGTACCATAGATTATTCTGCAGAGACTGAACAGCTTGCAGAAAATTTAGCAGAAAGTTTCCTTGGAAATGAGAATCTTACACCGGAAATAGAATATTCTTCAGAAAGTTATGCAAAGAGCTCAGAAGATATTACACTTGGAAATGAAGTTCTTAACGAGCAAGTtgtaatttcaaatgaaatagaAGAAAATTTCCTAGGAAATCAAGATCTTATAGAAGAAGTTTTAGTTTCAAACGATTTAGCAGAAAATATTGGAGCCGAAATAAGTATTACCTCTGAAGTAATTGATTTTATGGCAGAttcttttcaatttataaattctCCAGCAAAAACAGAAGTAATGTGTGTCAAAACTGTAGAAGACGAAATGTATAAAAGTATAGACAAAAATGTATGCAACATAAGCAAAGCAAATCTAACAACTGACGAAATATCTAATAAAGCTAGCTGTCAaactaaaagcaaaacaaaaagatCTAAAAGTGCACCAGAAATAAgcagaaataaaattgaaaaacactTACCTAAAGAAGTTTTGGCAAAGACTTGTAGCTCTAATAGAGTCTCAAAtcgtataaattttaataggaTACTTAGATCACCTAAAAGAATCAAGAACCCAAACGAATCCCGTATTATTGTAAACAGTAAAAGAAGATGGAACACTAACAGAAagataggaaaaaaatttaaactttcctATCGAGTAAAGAACtgcaaagaaaaaagtaaaaaagctgAAAACGTAAGTGCAGAAAATCCTATACAAAGTGAGATCTTTAAAGATAATGGAACCACATTAAAGCAAAAAACTACCACAACCCCTAAAAGAGTTAAGAAAAACTCCAAAGTTAATAGAAGATTAAGAAgtgacaataaaaaaatctgCAAAAAACTAAATGAAGAAACTTGTAAAAATAGCCAGATTGCAATGTTGAACCACGATTTGGAGAATTCCTACCAAATAGGTGATAATACATTTCTTGCTACTCAAGTTTCGCAAGAAAgctgcaagaaaaaaaatattgacaatgACAGTTTAGATTCCAATTCAGTCACAGAAGCTTTCTCCACCTTATCACCTAAATCTGAGGAAGATCACTTTGATTTCTGTGGACTCAAGGAAAAGTTAACCCAACATCATATAAGATATTTGATAGAGTTATACAAGAATCATCCCCGTTTATGGGATCAATCGCATACTGATTTTTGTGAACCTCATTTATGTCGTAAGTCCTGGCAAGAAATAACCCATTTATGGAATGATTACTGTAAAAGAAACTTTACAATAGCCGAAGTGCGCATACGCATTTGTACTCTTTGTCAGCGTTATTTACAAGAAAGAGAACGTCTGGTTTTAGAAGGTGAACTAGATGAGTTTGCCAAGTTTACTTATTATGAACAAATGCGTTTTTTGGAACACCAAAAGTCCTTACAAAAGCGCAAAGACTTGTATGATAAGCAAAAtgagaaaattttagaaatctATGAACATTTTCCCGTGCTGTGGCATGTCAGCCATTACAAGTTAAAACAGGCTAAAGCGAGAGCCAATGCTTTCCAAAGTATCAGTAAAGCTCTAAAATTGTGTGGTATACATTTATCTGCAGTGGGAGTAGAGAAACGTATAagatctttaaaaaaatgttatcgtTTGGAAAAAATACGCTATCTTCACTCCCAAGTAGAACAGACACCTTTTGATAGTACCTTTAAACACTTTGAGAAAATGCAGTTTTTAGATAAACATATCGATCCATTTGTATGTCGTATATGTGGTAAAATTTTTGAGAATTTAACCGGTTTTCGTGAACATTTAGAAGAAAACAATCATGGCAGTATTTTACAAGAAGAATATGAAAGCGAAACTGAAAGCGAAAAGGAAGAAAAACAATCACTAATGGATACAAACTGCAAACCGGAAGGTGAAAACTTCAATACAATTTCTGCAAAAGGAAATAATCTGCAGACATTGGCTGCAGAAAATGATAAACCTATTATACAAGAAGTTCTAGTCTTCGCACCAAATAGTTCACAagcaacagttttaaaaaatttccctGTTGACGAAGAAATGATGGAagaaattatagaaaatgtttcaaataCAGAAGGACTTGGCTTGCAAACAATTGACAGTttcaTTAATTCATCGAATAACTCTGAAGAAATGACAATAAGTTCCGCTTCCTTCAGCGAAGCTGTTTTCCCACCTGTAAATTTGGAAACTTTAAATAGTGACTTGAATATTCAGGAGAAATCACTAGAGAGTAACAACTGTGAATTGCCAAAACAGGATGTGAAAGTAATTGAGGCAAATCAAAATGTCCCATCATCTAAAAGTAAATCAGATTCTTTGGTGGTAAAGGTGCAATGtgctgatttttctttaaatttaaaactggaTGCCGAACAAGAATCATCGAATGACTCTGATAATGGGTTACAATTAGCAATGGACATTTGTAGTGTTCCGTTACCTGATTTTGAAGTACGAAAAATGATTGAACTCTATCGCAAATATCCACAGCTCTGGAATCCTAATCACTTGGATTATAATTCACGCAATTTACGACGTCAAGCTTGGTTTACACTTACTACAGAATTCTGTGAGGCGGTAGGAAAACAATTATCCTGGAGAAGCTTACATCGTAAATTAACTGATTATGCTAAAtattataagaaattaataatggaaCACGAGAATTATGAAAATTTCACAGTAAAGTGGACATTTTATAAGGATTTTAAGTTTCTAGATGATGTGATTGCAGTACATGATGAACTCCAGAGAAGCGTGCATCACCGtgataataatttcaaaatcatAGCCATTTACGAAACTCTGCCACAACTCTGGAATATAAGACATCCCGAATTTAATAAACGCTGCGTTAAACATCGTAACATTGAGTTAATGTGCAATCGTTTGCAAgaggaaaataattttcaaataaccaGCGAGCGTTTAAAGAATCGTCTCATTGAACTGAGAGCTCAATATCGTGCGGTTAAAAAGCAGCGTTTGAAATGTGAGAAGAATCAACAGAAATTTTTCACAGATTTTGAATTCTATGACGCACTTAAATTTCTTGAGGACAACATAGATCCATTCACTTGTGAGACATGTAAAATGGAGTTTAAAAAATTGACGGACTACAATCATCATCAGAAAAGACAACATGGTATAAAGAATTTTCAAAGAAATGACTCACTTTCTGTGCTACAATCCCTTGAAGAACAGGGTGGCCTATTGGAAAATGTATGCCATATATGTGGAATTAAATTTACCACACGCAGCAATTTATTGTATCATATTAAACGTCATGAAGGCATTAGGAATTATGCCTGTACCATGTGcccaaaaaaattctttgcttCCCATTCTCTGAAAGTACACATAAGATCTCATACTAAAGAATGTCCCTATACCTGTGAAAAGTGTGGCATGTCCTTTGTTAGTGCCAGCAAATTGAATCAACATGTTAAAAGACATTCAAACCAAAAAGATTTTGCCTGTAACTATTGTCCTAAAGCTTTCTATACAGCTTTCGAAAGGGATCGTCATGTAAGACGGCATCTGAATATACGCGACAAGGCATGCCCTATTTGTGGTAAAACTTTTGTAGCCGGTTCGTCATACTATGCTCACATGATGTTGCATAACGATACGAAACGTTTTAAATGTGATAAATGCGATATGAAATTTGCCCAATATGCTGGGCTGTATAAGCACAAGAAGAGGCATCACACGGGCATAGAGGGAGAATGA
- Protein Sequence
- MLPFIENHNKKFAHLPAQIPDHLKCGEVYTWLCNGELYAVECVLCEDKPLCPLSEFPQHMEVWHTDWEEYSESNSITKEQQEDNFFDSDDDEDNASLSFNTEDSGLYEQDHINEGEVLEPFEQVLIEQDETTINSIQINEDVDVDVNEIFTKENKTALLPAVVDVKGEIMLEQIEQPKQNNINKTITEQCNNKYTQTSKQQLHQIELSEMNGMVHTRERELETKEKHKEIENSKNPNNMSHTNKDVTTLLATKNLKRNCDKNHKRELCNFFTYIRDSQRIKDNFLEDNNLVTENPISSNTKFIEEISSENKNIPQQQVQDLGDIVKKLEENEHFLLEKTVRSNLELSSTPTKYMIDIEEKSQAHDNLLHVETNLKECSLDSIRESIDLQEDLLDNKSINQELRHTSNLAENSIDLKIPQQCTNILSDREDNCSQHTERNLREFEEVFTQYVQHPNNPQNFESTTQNSQNATETNSFGQDLDNFKDTKENTTDQTVEKSGHTIQHYPQSLYVQQKQKDYFQMQKSTIDYSAETEQLAENLAESFLGNENLTPEIEYSSESYAKSSEDITLGNEVLNEQVVISNEIEENFLGNQDLIEEVLVSNDLAENIGAEISITSEVIDFMADSFQFINSPAKTEVMCVKTVEDEMYKSIDKNVCNISKANLTTDEISNKASCQTKSKTKRSKSAPEISRNKIEKHLPKEVLAKTCSSNRVSNRINFNRILRSPKRIKNPNESRIIVNSKRRWNTNRKIGKKFKLSYRVKNCKEKSKKAENVSAENPIQSEIFKDNGTTLKQKTTTTPKRVKKNSKVNRRLRSDNKKICKKLNEETCKNSQIAMLNHDLENSYQIGDNTFLATQVSQESCKKKNIDNDSLDSNSVTEAFSTLSPKSEEDHFDFCGLKEKLTQHHIRYLIELYKNHPRLWDQSHTDFCEPHLCRKSWQEITHLWNDYCKRNFTIAEVRIRICTLCQRYLQERERLVLEGELDEFAKFTYYEQMRFLEHQKSLQKRKDLYDKQNEKILEIYEHFPVLWHVSHYKLKQAKARANAFQSISKALKLCGIHLSAVGVEKRIRSLKKCYRLEKIRYLHSQVEQTPFDSTFKHFEKMQFLDKHIDPFVCRICGKIFENLTGFREHLEENNHGSILQEEYESETESEKEEKQSLMDTNCKPEGENFNTISAKGNNLQTLAAENDKPIIQEVLVFAPNSSQATVLKNFPVDEEMMEEIIENVSNTEGLGLQTIDSFINSSNNSEEMTISSASFSEAVFPPVNLETLNSDLNIQEKSLESNNCELPKQDVKVIEANQNVPSSKSKSDSLVVKVQCADFSLNLKLDAEQESSNDSDNGLQLAMDICSVPLPDFEVRKMIELYRKYPQLWNPNHLDYNSRNLRRQAWFTLTTEFCEAVGKQLSWRSLHRKLTDYAKYYKKLIMEHENYENFTVKWTFYKDFKFLDDVIAVHDELQRSVHHRDNNFKIIAIYETLPQLWNIRHPEFNKRCVKHRNIELMCNRLQEENNFQITSERLKNRLIELRAQYRAVKKQRLKCEKNQQKFFTDFEFYDALKFLEDNIDPFTCETCKMEFKKLTDYNHHQKRQHGIKNFQRNDSLSVLQSLEEQGGLLENVCHICGIKFTTRSNLLYHIKRHEGIRNYACTMCPKKFFASHSLKVHIRSHTKECPYTCEKCGMSFVSASKLNQHVKRHSNQKDFACNYCPKAFYTAFERDRHVRRHLNIRDKACPICGKTFVAGSSYYAHMMLHNDTKRFKCDKCDMKFAQYAGLYKHKKRHHTGIEGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -