Basic Information

Insect: Metopia argyrocephala
Gene Symbol: -
Assembly: GCA_963576795.1
Location: OY756209.1:113714944-113717304[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0037 0.46 12.2 0.3 2 23 207 229 206 229 0.97

2 10 0.018 2.2 10.0 4.7 1 23 252 275 252 275 0.96

3 10 0.11 13 7.6 0.6 2 23 298 320 297 320 0.96

4 10 0.57 70 5.3 4.1 2 23 328 350 327 350 0.95

5 10 0.00026 0.032 15.8 0.3 2 23 458 480 458 480 0.97

6 10 2.2e-06 0.00027 22.3 1.0 3 23 489 510 488 510 0.97

7 10 7.6e-05 0.0093 17.5 0.4 1 23 562 584 562 584 0.96

8 10 3.5e-06 0.00042 21.7 3.2 1 23 590 612 590 612 0.99

9 10 6.9e-07 8.5e-05 23.9 1.8 1 23 618 640 618 640 0.98

10 10 0.00012 0.015 16.8 0.5 2 21 647 666 646 670 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0037	0.46	12.2	0.3	2	23	207	229	206	229	0.97
2	10	0.018	2.2	10.0	4.7	1	23	252	275	252	275	0.96
3	10	0.11	13	7.6	0.6	2	23	298	320	297	320	0.96
4	10	0.57	70	5.3	4.1	2	23	328	350	327	350	0.95
5	10	0.00026	0.032	15.8	0.3	2	23	458	480	458	480	0.97
6	10	2.2e-06	0.00027	22.3	1.0	3	23	489	510	488	510	0.97
7	10	7.6e-05	0.0093	17.5	0.4	1	23	562	584	562	584	0.96
8	10	3.5e-06	0.00042	21.7	3.2	1	23	590	612	590	612	0.99
9	10	6.9e-07	8.5e-05	23.9	1.8	1	23	618	640	618	640	0.98
10	10	0.00012	0.015	16.8	0.5	2	21	647	666	646	670	0.89

Sequence Information

Coding Sequence: ATGGATGAGAGGGTGACCATACAGAAGTGCAGAACATGTCTTAAAAGTAGCACAAAATCATTTCCTCTTATTAAGGCAGTACGTGGATGCTCCCCAAAAACAACATATTGGcaaattttaaaggaatttgcacaaattgagTATAACATGGATTACGAATGTCATATGCCTCAGAACTTATGCCTTCTATGCTGTCGCCAGTTGAGGAATACTTACGTCTTCATAAAACAGGCTCAAAATTGTAAtcttaaacttattaatgtaaTAACAAAAGAACTTGATTGTCTACGGGAACAAGCAATAGATTTACCAGAAGTGCAGAATGCAATATTGGCTTCTAACAACGATAATTCTGATAATCAAAGTTCTATAGCAAAGGATGGTTGTAGAAGTCATGAAAGTAATTTGGAAAGAAATATATCACTTATGGGAGAAACCATTTTAAGAAATGAGCAGAAATTAAATCATGATTTACAAGATAATCTAGAAACGGATAATAACAATTCTAACATTGAAattgatgaaaatataaatGCATTAGACAGTAAAGAGGATGAGAATTCATTAGTACGTAAAACTCAAAATTTGGAATCTGCAGAATCTCTCCTAGATGCTATACAATGTCCTGTATGCAATAAAATTATAGCTATGCATGATAATATCTTTAATCATATGCGTATTCAACATGACGTTACTGAAGCAgcatcttttaaaattttacacacaCAAAAACCGTTATTGAAAGAACAAAGATTCACATGTGAAAAATGTCCTTGCAACTTTAACAAAGAATACGAATATCTGAAGCATTTAAAACAGAAGCATAAAAACAGCGAGGCTACGAAATTGGAATCcatctttagaaaaaaaagagcagctaataaaattattaaatgccaATCCTGTGACTATACTGCTAAAAGCTATGCGGCTTTAAACTATCATAATCGTTCCAAACATGGTACTGAAGATGATAAATTAAAGTGTAAATTTTGCTCCTAcacaagttttaaaaaatgtaatctaTTAGTCCATGTAAAAAATGTACACAAAGAACTGATTAAAAATCTGAAGAGTAATGTCGGTAGCAATACGAATGAAAgTATTAACTCgaatatttataacaatttaattaataattttactagAAGTGATTTTCTACCAACCCCAGTAGATGAAGAAAATTCTTTTGACAATACCAAATACTCGAGCGATGACGATTTACCATTGGTACACACTAAAGCAAATTTGACACATAAAGTGGAAATAGGGCaagaaaaagaagaatttaGTGATGAAGATTTCATAAGAAGTATATTAAATATTAGGAAAAGATCACGTAAAATTTTGTCAACAAAAGCTTTAGCTAGACGTTGTGAAGAGTGCGGCAATATCTACAAAAACTACAAATCACTGTTGGCCCATCAACGTAGTGTTCACATAAGTGAAGACAAGTTCAGTTTATGTCCTCATTGTGGTAAAAAGTATAAACGAAAGGGTGATCTTAGAATACATATTGAAAAAGCACATGCTCTCCCAAAAAGTGATTTAAAAACTGCTAAACAGCAACCAACATCTAAAGTTAGAGAAAAACGTTTTATGTGCACAGAATGTTCATATACATGTACAACAATAaccattttgaatatttatataaatcgtCATCATACTGGTGAAAAGCCATATAAATGTGatatatgcctaaaatcctttATAGTACCTTATGACTTAAAGATTCACCGTTATTTGCATACCGGCGAAAAACCATACAAATGTCCAATTTGTTTTAAAGGTTTTCGTGATAACTCACACATGCTTAAGCATAAGCGTATACACACTAACGAAAGACCATATAAATGTATAGATTGTGGTAAAAGCTTTACACAATCCTATAATTTATCTGTACATAAAAGAACACAtcttaaagagaaaaaattaaattgttccaTTTGTGGTAAATTTTTTGAGAAGAAATCTATGCTAAATATACATCGGATAAATGAAAATCATCATGACGAGgttgtatga
Protein Sequence: MDERVTIQKCRTCLKSSTKSFPLIKAVRGCSPKTTYWQILKEFAQIEYNMDYECHMPQNLCLLCCRQLRNTYVFIKQAQNCNLKLINVITKELDCLREQAIDLPEVQNAILASNNDNSDNQSSIAKDGCRSHESNLERNISLMGETILRNEQKLNHDLQDNLETDNNNSNIEIDENINALDSKEDENSLVRKTQNLESAESLLDAIQCPVCNKIIAMHDNIFNHMRIQHDVTEAASFKILHTQKPLLKEQRFTCEKCPCNFNKEYEYLKHLKQKHKNSEATKLESIFRKKRAANKIIKCQSCDYTAKSYAALNYHNRSKHGTEDDKLKCKFCSYTSFKKCNLLVHVKNVHKELIKNLKSNVGSNTNESINSNIYNNLINNFTRSDFLPTPVDEENSFDNTKYSSDDDLPLVHTKANLTHKVEIGQEKEEFSDEDFIRSILNIRKRSRKILSTKALARRCEECGNIYKNYKSLLAHQRSVHISEDKFSLCPHCGKKYKRKGDLRIHIEKAHALPKSDLKTAKQQPTSKVREKRFMCTECSYTCTTITILNIYINRHHTGEKPYKCDICLKSFIVPYDLKIHRYLHTGEKPYKCPICFKGFRDNSHMLKHKRIHTNERPYKCIDCGKSFTQSYNLSVHKRTHLKEKKLNCSICGKFFEKKSMLNIHRINENHHDEVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -