Basic Information

Insect: Metopia argyrocephala
Gene Symbol: -
Assembly: GCA_963576795.1
Location: OY756208.1:184654568-184658390[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 7.1e-05 0.0087 17.6 4.6 1 23 244 266 244 266 0.98

2 10 6.6e-06 0.00081 20.8 0.4 2 23 285 306 285 306 0.97

3 10 0.00031 0.038 15.6 1.1 1 23 332 353 332 353 0.97

4 10 0.00023 0.029 15.9 0.3 1 23 359 381 359 381 0.98

5 10 0.00034 0.042 15.4 1.1 1 23 418 440 418 440 0.96

6 10 6e-08 7.3e-06 27.2 1.2 1 23 446 468 446 468 0.99

7 10 0.0001 0.013 17.0 3.5 1 23 474 496 474 496 0.99

8 10 8.8e-07 0.00011 23.6 0.6 1 23 502 524 502 524 0.98

9 10 1.5e-05 0.0018 19.7 0.3 1 23 528 550 528 550 0.98

10 10 0.00065 0.079 14.5 0.1 2 23 563 585 563 585 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	7.1e-05	0.0087	17.6	4.6	1	23	244	266	244	266	0.98
2	10	6.6e-06	0.00081	20.8	0.4	2	23	285	306	285	306	0.97
3	10	0.00031	0.038	15.6	1.1	1	23	332	353	332	353	0.97
4	10	0.00023	0.029	15.9	0.3	1	23	359	381	359	381	0.98
5	10	0.00034	0.042	15.4	1.1	1	23	418	440	418	440	0.96
6	10	6e-08	7.3e-06	27.2	1.2	1	23	446	468	446	468	0.99
7	10	0.0001	0.013	17.0	3.5	1	23	474	496	474	496	0.99
8	10	8.8e-07	0.00011	23.6	0.6	1	23	502	524	502	524	0.98
9	10	1.5e-05	0.0018	19.7	0.3	1	23	528	550	528	550	0.98
10	10	0.00065	0.079	14.5	0.1	2	23	563	585	563	585	0.95

Sequence Information

Coding Sequence: ATGGAAGATGAAATTGTTGAACTAATAGAAGAAACTAATGACGGGGAAGAAGAATGCTGGATACAATATGCTAAAGAATCGAAAACAAAAGATGATACAAATGCAACTAGTTTTAGCAATACAAATATCGAGCATGATTTAATATTGATAGATACCACAGAGATGGTGGAAAATGATGACAACGTCATGACATTTCAATATATTGATGATAATGGCAACGATAGTGATGCTAAAGATCTTGCAAATGGTTGTTCTGATACTGAAGTACAGGTTGAATTAAATGACTATGAGTTCAATATACAAGACAAAGAATTGGTTAATATAGATCTTAACAAGCATAGTTTAATATTAAGGGAGACTATTGATGAAAACGGCCAATTGGTTGAAGGCTATTTCTGTCAGCAGTGTAATTCAGCATTTAACTCAATAGAAGATTTCTTTACGTTTCATACTTCTGCAGAAATTGTAGATGAACAGGAAAATACAAGAATAGAAAATGGTAGTGAGTTATGGGATTTAGTAGAAAATGTAGGTGAAAAGGAAGATACGGAAGCAGAAAGTGTGGAAATTAAACCGCTTGAATACAGCATTAATATGGAAAATGAACGCTATTTCTGCTGTCACTGTAAAACAGTGCTTAAGAATTTATATATGGCTGAAAACCACGACTGCTCCAATGATTTGCAGCCAAACATCGAAACTCTAAATGAGTCATCAGATAACCATGTCTACAGATGCCATTTGTGCGACAAGAATTACTCGTCCTTACGTTCCTTTACTAATCATCAACGTTGGCATAGAAAAGCTGAAGCACAGCTGGGTTATACCAAAACATTACATAAAGTTACGGCTGTGTGTGAAATATGCAACACGGTTTTTGAAtccgaaaaaaatttgaaATTACACATGAAGATGCATAAAACACATGCTGTTAAAACTATTCAGGATGCATTACCGATCGGAGCTCAAAATGAATATAATGAATTGAATCAATTCTTTTgtgaaatatgtaataaaagttttgatcAAAAACTGCTAATAATACACAAGAATATGCATCAACATGTTGAGGAATATGTTTGTGGCAAATGTAACAAACAGTTTGAAAACTTACCAAGTTATGAAATACACTTGCAAATGCATATTGATAACATGAATAATGCGaaggcaaaaaaattttctcaaaaagaAGATGGTCCCTCTACTTCAAGTCAAACTAGTGGTACAGTAAGGGCAGATGGCAAACGAAAACATGCTTGTCAATATTGTGGCAAAGAATTTATGCGACCGTATGAAAAAGTTAAACATGAACGCGTACATACTGGTGAAAAACCCTATAAATGTGAAGTGTGTGGCAAAACATTTAGAGTTTCCTATTCGTTAACTCTGCATTTAAGAACACACACCGATATACGCCCATATGTGTGTGCAACCTGTAATAAACGCTTTAAACAACAATCTGTTTATGTGCATCATTTGAAAACCCATGTAAATGAGCGAGGCTATAAATGCGATATATGTGGGAAAAGCTTTCGTACTTCTGTTCAACTTAGTGgccataaaaatatacatagtaAACCCTATAACTGCACAGAATGTAATCGACCTTTTGCCTCCCTGTACGCAGtcaaaatacatatgaaaacacacaataaatgtcataaatcaaataaaaatttaaaaaatcgctGTAGTATATGTGGTGCATCATATGCACGTTTATTTGCTTTGAGGCTTCATATTAAAGAGCAACATGGTATAGACTTAGATCCTACACAGTTGTTAGATGTAACAGAAAATGGAAATTGCATTGAAATGCATAAAGATATGGACGCTGAAACAGCTATACTAATGAATGCCGCCAATGAGGCAAGTAAtcaacaaattcatttttttaatgatgcTATTGATGAAGAAGAGCGCAATGAACATGACATTGGAAGAGACTCTGAAGAAGATGAAGATGAAATATTAGATAATCAAGTTGATCATGAAGAAAATATAGAAAGTATTTTACCTGACAGTAACTACTTAGATGAAACAGCGGCAGCTACTCAAACCATATTAAATACCGAAGAGataaatgtAGAGCATTTTCATACAGAAGAAATTATAACCGATTGGATGTCTAAATAA
Protein Sequence: MEDEIVELIEETNDGEEECWIQYAKESKTKDDTNATSFSNTNIEHDLILIDTTEMVENDDNVMTFQYIDDNGNDSDAKDLANGCSDTEVQVELNDYEFNIQDKELVNIDLNKHSLILRETIDENGQLVEGYFCQQCNSAFNSIEDFFTFHTSAEIVDEQENTRIENGSELWDLVENVGEKEDTEAESVEIKPLEYSINMENERYFCCHCKTVLKNLYMAENHDCSNDLQPNIETLNESSDNHVYRCHLCDKNYSSLRSFTNHQRWHRKAEAQLGYTKTLHKVTAVCEICNTVFESEKNLKLHMKMHKTHAVKTIQDALPIGAQNEYNELNQFFCEICNKSFDQKLLIIHKNMHQHVEEYVCGKCNKQFENLPSYEIHLQMHIDNMNNAKAKKFSQKEDGPSTSSQTSGTVRADGKRKHACQYCGKEFMRPYEKVKHERVHTGEKPYKCEVCGKTFRVSYSLTLHLRTHTDIRPYVCATCNKRFKQQSVYVHHLKTHVNERGYKCDICGKSFRTSVQLSGHKNIHSKPYNCTECNRPFASLYAVKIHMKTHNKCHKSNKNLKNRCSICGASYARLFALRLHIKEQHGIDLDPTQLLDVTENGNCIEMHKDMDAETAILMNAANEASNQQIHFFNDAIDEEERNEHDIGRDSEEDEDEILDNQVDHEENIESILPDSNYLDETAAATQTILNTEEINVEHFHTEEIITDWMSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -