Basic Information

Insect: Metopia argyrocephala
Gene Symbol: -
Assembly: GCA_963576795.1
Location: OY756208.1:110926047-110929845[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0004 0.05 15.2 2.5 1 21 195 215 195 216 0.92

2 14 3.4 4.2e+02 2.8 9.7 1 20 272 291 272 292 0.95

3 14 4.7e-05 0.0057 18.1 4.7 2 23 304 326 303 326 0.97

4 14 1.5e-05 0.0018 19.7 1.9 1 23 403 425 403 425 0.98

5 14 0.0055 0.67 11.6 1.8 1 23 431 454 431 454 0.96

6 14 0.013 1.6 10.4 0.2 1 23 476 499 476 499 0.95

7 14 9.4e-06 0.0011 20.3 2.6 1 23 505 527 505 527 0.98

8 14 1.9e-06 0.00023 22.5 2.4 1 23 533 555 533 555 0.99

9 14 1.1e-07 1.3e-05 26.4 1.8 1 23 561 583 561 583 0.96

10 14 0.0071 0.87 11.3 4.1 1 23 589 611 589 611 0.97

11 14 0.00084 0.1 14.2 2.2 1 23 617 639 617 639 0.96

12 14 1.4e-06 0.00017 22.9 2.6 1 23 645 667 645 667 0.99

13 14 1.3e-06 0.00016 23.0 1.7 1 23 673 695 673 695 0.99

14 14 0.0075 0.91 11.2 0.1 1 19 701 719 701 720 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0004	0.05	15.2	2.5	1	21	195	215	195	216	0.92
2	14	3.4	4.2e+02	2.8	9.7	1	20	272	291	272	292	0.95
3	14	4.7e-05	0.0057	18.1	4.7	2	23	304	326	303	326	0.97
4	14	1.5e-05	0.0018	19.7	1.9	1	23	403	425	403	425	0.98
5	14	0.0055	0.67	11.6	1.8	1	23	431	454	431	454	0.96
6	14	0.013	1.6	10.4	0.2	1	23	476	499	476	499	0.95
7	14	9.4e-06	0.0011	20.3	2.6	1	23	505	527	505	527	0.98
8	14	1.9e-06	0.00023	22.5	2.4	1	23	533	555	533	555	0.99
9	14	1.1e-07	1.3e-05	26.4	1.8	1	23	561	583	561	583	0.96
10	14	0.0071	0.87	11.3	4.1	1	23	589	611	589	611	0.97
11	14	0.00084	0.1	14.2	2.2	1	23	617	639	617	639	0.96
12	14	1.4e-06	0.00017	22.9	2.6	1	23	645	667	645	667	0.99
13	14	1.3e-06	0.00016	23.0	1.7	1	23	673	695	673	695	0.99
14	14	0.0075	0.91	11.2	0.1	1	19	701	719	701	720	0.97

Sequence Information

Coding Sequence: ATGTTAATACTTGAAATATATGGCCGAATGTGTCGAGTGTGCATGTGCAAATCGAATAATTTGCACGATTTAAATGAGACCACCGAAGAGTGTCTCACCATGAATGAAATGCTAATAAAAACTGTGTCCGGCATACATGCCAACATCGAATTTCCAGTGCCTCAAGAAATTTGTGATTTATGTATGGAACATTTACAAATTTCTTACAGATTCCAGCAATTGTGCATGACCACTaatgagcaaatgcaaaaaatttgggAACAGTCGCAAAAGGCTGAAGTCAAACAACAGCAACCTCAGGAGGGTGGGGTGAGCAACGAAGATGAACCAGATCCCATTAAAGTAGAATATGATATTGACGATGGGGAAGAACAAAAGTTCGATAATGTCGAATCAATGGAAGAATTTGAAAGTGTGGAAAATGGCAATAAATGGAATAATGACACTGATGACGATGCGCCGCATAAAGATGagctAGAATGCACAAAAATCACTTTAAAATCGTCTTGGAGTAAGGACAACTCTACAAAACATACACAAATAGGGCTTCATCGGCGTAAGCATGAGTCTGtacattcattttttaattgccAAAAGTGCACACaaagttttaaaactaaaagtcttttgctaaaacacaataaaagttgtaataaaagcaaaagaaaatcgGAAATTAAAAGTGAAAGCGAGGATGAGGATGTTCCCTTAAGTGctttaaagaaaaacgaaaGCGGCAACGAGACTGACGTATctaaagaaaatgataaaaagagaagaaaaatgaTTAAGCCACATAACAAAAAGACATCctattattgtaaaaaatgcAAATGCTATTTTAAATATGGCTATCAGCTTACCAAACATTATTGTTGTAATAATGAAGATAGTATtgcaaattcaaataaatgcaaaatatgcCATAAAACATTTAGCAAGGAAAATATGTTACTAAAACATATGAACAGTAAGCATAAGGATGCTAAAATTACAACAGAAGGTAAGGCCTACAATGAAAGTGAAGACAACGATTTAAAGCTAGACAACCAGAACGAAGAAATAGATATAAATAATGATATTGATAGTGATAATAATTGGCATGTTACTAATCAAAATGAAACATCTGATGACAGTGATTCGGATTATAAGGAAAAGGAAAAGCCATCTTTAAAACCAGTATCAAAAGAGGCTGCAGCTAATCTGTATAGTTGCAATGAATGTGATGCCTCATTTAGATTTGAGAAACAACTTGAACGACATacaaaaaaacatacagaagCTCATCGATTTGTATGTGTTTTATGCTGGGATCGTTTTAAATATCCCCATATGCTACAAAAACATATGGAAAAACGACATCCCGAAGAAAATCCTAATCCCAAAACGTCTGAATCGAAACCAatagaaaatatagaaaagacACATATTTGTGGCTATTGTCCATCAGCTTATTCAAATGTTGGAGGATTGGCACAACATATGAGCAAAAAACATCCCgaaataaaaccatttaaatGTGATAAGTGCGATAAAACGTTTGTGGTGGAAGAACATTTGAAAATACACACAAACCGTCATATGggtattaaaaactttaaatgcgATCTATGTGAtaaatctttTTCATTTAAGTTTGCTATGAAACAGCACATGCGTATACATACGGGGGACGTGAACTATTTGTGTACTTTGTGTGGTAAAAAATTCTACAGACCTAGTAATTTACGGCAACATATGCAACGTCATGGTGATGATAAACCATATACATGTCCTCACTGTCCTAAACGTTTTAAATGTCCTTCAGATCGTTATATACATCTGATGTCTCATCAAGAGGGTAAAAATCATGTATGTCAAACTTGTGGCGCAAGATTTTCTAGAGTGGACACTTTACATCAACATCAAATATTACATACAGGAGAAAAACGTTACAAATGTGACCAGTGTCCTATGGCATTCTGCcgtttaatgaatttaaatcgCCATTTGCGCACACATACAGGGGAGAAACCATATAAGTGCAAATTTTGTGAAAAGGCTTATGCCCAAAGTAATGATCTAAATAAACATTTACGTACTCATGTTGGAGAGAACACATACATGTGTACACAATGTCCAGCAGCCTATAAATATCAGGCGGATTTAAGGAACCATGAATGGGAACATTATCGCTTACAAAAGGAAGCCGAACAGAAAGCTAAAGACGAAGCGATAGttttagaaatgaaaaaagaacaGGCTGTTACAGAAGTAAATGTATAA
Protein Sequence: MLILEIYGRMCRVCMCKSNNLHDLNETTEECLTMNEMLIKTVSGIHANIEFPVPQEICDLCMEHLQISYRFQQLCMTTNEQMQKIWEQSQKAEVKQQQPQEGGVSNEDEPDPIKVEYDIDDGEEQKFDNVESMEEFESVENGNKWNNDTDDDAPHKDELECTKITLKSSWSKDNSTKHTQIGLHRRKHESVHSFFNCQKCTQSFKTKSLLLKHNKSCNKSKRKSEIKSESEDEDVPLSALKKNESGNETDVSKENDKKRRKMIKPHNKKTSYYCKKCKCYFKYGYQLTKHYCCNNEDSIANSNKCKICHKTFSKENMLLKHMNSKHKDAKITTEGKAYNESEDNDLKLDNQNEEIDINNDIDSDNNWHVTNQNETSDDSDSDYKEKEKPSLKPVSKEAAANLYSCNECDASFRFEKQLERHTKKHTEAHRFVCVLCWDRFKYPHMLQKHMEKRHPEENPNPKTSESKPIENIEKTHICGYCPSAYSNVGGLAQHMSKKHPEIKPFKCDKCDKTFVVEEHLKIHTNRHMGIKNFKCDLCDKSFSFKFAMKQHMRIHTGDVNYLCTLCGKKFYRPSNLRQHMQRHGDDKPYTCPHCPKRFKCPSDRYIHLMSHQEGKNHVCQTCGARFSRVDTLHQHQILHTGEKRYKCDQCPMAFCRLMNLNRHLRTHTGEKPYKCKFCEKAYAQSNDLNKHLRTHVGENTYMCTQCPAAYKYQADLRNHEWEHYRLQKEAEQKAKDEAIVLEMKKEQAVTEVNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -