Basic Information

Insect: Metopia argyrocephala
Gene Symbol: -
Assembly: GCA_963576795.1
Location: OY756208.1:4190420-4198375[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.088 11 7.8 1.2 1 23 220 243 220 243 0.91

2 26 2.1e-05 0.0026 19.2 1.1 1 23 249 272 249 272 0.97

3 26 0.0043 0.53 11.9 2.6 2 23 303 324 302 324 0.95

4 26 0.005 0.61 11.8 2.2 1 23 401 424 401 424 0.96

5 26 0.016 2 10.1 2.2 1 23 431 453 431 453 0.99

6 26 0.00053 0.065 14.8 1.4 1 23 496 518 496 518 0.98

7 26 0.011 1.4 10.6 0.2 2 20 531 549 530 552 0.92

8 26 0.062 7.7 8.3 1.2 1 23 632 655 632 655 0.94

9 26 0.012 1.5 10.5 0.4 1 21 662 682 662 683 0.95

10 26 1.1 1.4e+02 4.4 0.4 2 23 695 717 694 717 0.93

11 26 0.00066 0.081 14.5 0.4 2 23 732 753 731 753 0.97

12 26 2.7e-06 0.00033 22.0 2.0 1 23 759 781 759 781 0.98

13 26 0.12 15 7.4 2.3 1 23 926 950 926 950 0.97

14 26 0.72 88 5.0 1.2 1 21 957 977 957 978 0.93

15 26 6.3 7.7e+02 2.0 2.6 1 23 987 1010 987 1010 0.93

16 26 0.009 1.1 10.9 1.2 2 23 1025 1047 1024 1047 0.95

17 26 0.0034 0.42 12.3 3.4 1 23 1054 1076 1054 1076 0.97

18 26 0.043 5.3 8.8 0.4 2 19 1103 1120 1102 1122 0.94

19 26 2.2e-05 0.0027 19.1 1.3 1 23 1180 1203 1180 1203 0.98

20 26 0.032 3.9 9.2 0.2 1 23 1240 1263 1240 1263 0.96

21 26 0.089 11 7.8 6.1 1 23 1295 1318 1295 1318 0.97

22 26 4.2e-07 5.2e-05 24.6 0.7 1 23 1344 1366 1344 1366 0.96

23 26 7.5e-06 0.00092 20.6 0.6 1 23 1372 1394 1372 1394 0.99

24 26 0.00016 0.02 16.4 4.1 1 23 1400 1422 1400 1422 0.97

25 26 1.6e-06 0.00019 22.8 2.4 1 23 1428 1450 1428 1450 0.99

26 26 0.045 5.5 8.7 0.8 1 23 1456 1480 1456 1480 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.088	11	7.8	1.2	1	23	220	243	220	243	0.91
2	26	2.1e-05	0.0026	19.2	1.1	1	23	249	272	249	272	0.97
3	26	0.0043	0.53	11.9	2.6	2	23	303	324	302	324	0.95
4	26	0.005	0.61	11.8	2.2	1	23	401	424	401	424	0.96
5	26	0.016	2	10.1	2.2	1	23	431	453	431	453	0.99
6	26	0.00053	0.065	14.8	1.4	1	23	496	518	496	518	0.98
7	26	0.011	1.4	10.6	0.2	2	20	531	549	530	552	0.92
8	26	0.062	7.7	8.3	1.2	1	23	632	655	632	655	0.94
9	26	0.012	1.5	10.5	0.4	1	21	662	682	662	683	0.95
10	26	1.1	1.4e+02	4.4	0.4	2	23	695	717	694	717	0.93
11	26	0.00066	0.081	14.5	0.4	2	23	732	753	731	753	0.97
12	26	2.7e-06	0.00033	22.0	2.0	1	23	759	781	759	781	0.98
13	26	0.12	15	7.4	2.3	1	23	926	950	926	950	0.97
14	26	0.72	88	5.0	1.2	1	21	957	977	957	978	0.93
15	26	6.3	7.7e+02	2.0	2.6	1	23	987	1010	987	1010	0.93
16	26	0.009	1.1	10.9	1.2	2	23	1025	1047	1024	1047	0.95
17	26	0.0034	0.42	12.3	3.4	1	23	1054	1076	1054	1076	0.97
18	26	0.043	5.3	8.8	0.4	2	19	1103	1120	1102	1122	0.94
19	26	2.2e-05	0.0027	19.1	1.3	1	23	1180	1203	1180	1203	0.98
20	26	0.032	3.9	9.2	0.2	1	23	1240	1263	1240	1263	0.96
21	26	0.089	11	7.8	6.1	1	23	1295	1318	1295	1318	0.97
22	26	4.2e-07	5.2e-05	24.6	0.7	1	23	1344	1366	1344	1366	0.96
23	26	7.5e-06	0.00092	20.6	0.6	1	23	1372	1394	1372	1394	0.99
24	26	0.00016	0.02	16.4	4.1	1	23	1400	1422	1400	1422	0.97
25	26	1.6e-06	0.00019	22.8	2.4	1	23	1428	1450	1428	1450	0.99
26	26	0.045	5.5	8.7	0.8	1	23	1456	1480	1456	1480	0.91

Sequence Information

Coding Sequence: ATGGAAAGAGTTAATCAAAGTGATTGTATTATAAATGGTGTCCATTACAAATGTCGTACATGCTTTGATCCAGGGGCAACTGTCTGCACTCTAAGTGAAGAATATAAGAATACGAAAAACTGGGGAGATCTATTAAGGGCCGTGGGTCAGCTAACGACAACCCATGACCATTTACTACCCAAAACAATGTGCTGCTTATGTTCGGAGAAGCTCCAGAGCTCCTATGAATTTGTGCGACAAATTCATAGcgtgaatagaaaatttttgaaactatTGAACATATCAGAAGATCCGCTTCAGGATGGCTTTCAAAGTGATAATGAAGCTTTTTCTGATTGTCTGGAAGAATCAACCATAGATTTACCATTGGAACAGTATATACCAGAAATAAAGTTAGAAGATGACTTAGAAGGCACTAACACTATGTTGGAAGAAGAAGCCGATCATAACTATATatcagaaaaagaaataattaagtCTGACTCTGAACAATCTGATTGcaacagaaaatataaaacaagactttcTAAGGAACAATCACTTGATGATTACTGTAATGATAACGATTATGATAATGAAAAGAATCAACCAGTCAAACGTAGAAAGGGAAGACAAGCACCagattattttgataaaattgaaaaagttgaCGATCGCTTTGTTTGTCTTATATGCCAAAAATCGTTTTCCTTAAGAAAAGACTGCGGCCGCCATATTGCTTCAATACATTTGCGTCAAATCATATTTCCCTGCGAGTTCTGTGGTCAAAGCTTTAGTCGTAAGGACAAAATACAACAACACATTAAGCGTATGCATTCTGACAGACCATTTTATCCGAAATCTAAACAAAGAGAATTTCTATTCGGTGATCGTTTGTATAGCAAGCCGACTACCTGGCATCTGGTTGAATGTAGACTGTGTAATACAAATTTTAGCTCAACTAAACATCTTAAACAACATTTATTAGAACATAGCAATGTAGAAACTTTGGCCAGTTTAGAATTAGACAGTAAGATTGTACAGCATTTATTTTCTCACACAAACgatttaaatgttataaaagaaaatatttgccgAGACATACGAGATAAGCATTGGTTCAAATACTACAATGTCTTAAATGAATACTCATTTGAAATGTCTATTAGTGATACAGAGGTAGAAGATTTGGAATGTGAAACTGAACAATGCAGTAACAAGTATAAATGTGAGCTGTGcaataaacaattttcatttaaatttcaagCATTTTCCCATTTAAAAGAAGCCCATATTGAAGCTGATATACCCTATAAATGTGGTTTATGCAAAATGGAATTTGTATCCTTAAAAATGTATGAACATCATGGCAAAACCCATTGTCGTAATAAGCACAAAATTTTAGTTTGCACAAGCTGCCCTGCCAAATTCGCATGGCccgaaaatatgaaaaatcacAATTGCGCCGCTAAAGTAGTAGTACCCTTGACCAcagataaaaaagtttttaaatgtaatatatGTGATCGTATATATGAGGTCAAGactaaatatgaaaaacatttacAATCCCATAAGGATGGCAGCATAGCATCCACTAAGACTATAATTAAATGTGGTTTGTGTATAAAGTCTTTTGAAAGGCTTTCACAGTTAAGGGAGCATATGCCTATTCATGCTGATGGCAAAACCGGCATTGACTTTAAAGgtagtatttatataaaaagatttGAACGTTCAAAAACATTGGATTACGCTTTACTGCAGCAGGaaattcaaaatgcttatagaAAATCGCAAATTAGTCGTTTCTATCGCGCCATGGACAGAGATGGCAACGAAATGGATATTTTAGATTCGGATTCTGAAGAAGAAGAACTTTCAGTctgtaataaacaaaatatgaaaaaagaatacaaatgtGAACTTTGtttagaaatatacaaaaaaagaaaactacttTTAAATCATCAATTTCTTATGCACAATGATGTGCCTTTGCCATACACTTGTAATTCCTGTACTCAACAGTATGTCAGCAATGATTTGTTGCAACAGCATTTGTTGAGGGATTGTTGGAATGAACATAGACGCGTGGCTCAACAATGTGAATTTTGTAATGCACGTTTCATATGgccaaataatttcttaaaacatAAGGAGATACAGCATAAGCCTCAAAAGAATGCGCGTCCTCAAACAGCTAGTACTCTTAAATGTGAATTTTGTGAAAAAGTTTTCATATGGCCAAAAGATTTAGTACGCCACCGTAGAACCCATACGGAAGGCAAGAAATTTTCTTGCCCCCATTGCGAACGTAAGTTTCAACGCAAAGATAACCTTTTGGCTCATATACGACTGCATGATCCTGAAAGCCTATCTATGATCTTAAACTCTAATAAAACTATAGACTATATACTGCCACATCTTTTAAAACCCCATGGATGTAAGCAAATTAAATGTATGATTTGCTATTCAGATCATAATCGCATACGTGATTTACGTTCCCATTTGAGATCCCATCGTTACAAAATCAATttcgaaaaaagaaaagagactGAAACTTCTGATTCTATATCAGCACAACTGTATCCAGACGAAAGGGCAATGAGTGAGGAGGATTTAGTGAAGCGTATTGGATCAGATATTGCAGCTGCAAATAATTTAGAACGTTTTTACTCTATTACAAATGAGAACGGCTATGAAGTGAACTTAGATAGCTCAGAAACGGAGAGTGATTCAGATGACAATGGAGGATATGAAGACATTGGTAATGAAGAAATGTCAAGACGATTCTATAAATGTGATTTATGTCCATCCCTAAGTTTTAATcgtaagtttaaattttttgatcaCCAAAATAAAGCGCATACCTGGGAAGAAGCACGgcatatttgtgtgcattgcaaTGCTCGTTTTCTATCCTCCTATATGCTCCAGGTACATTACAAAAATCaatgtaaaaatacaaaaaagcgACACTTTTGTCGCCGTTGTCCATTGCGTTTTATGTggaaaaataatcttaaaattcattttatgatggaacatgGCCAAGAACTTACCAAAGATTCCGATTCAATACGTCGCACAGAATGTTTTTTGTGTCAAGAGAAGTTTTTTAATCAATGGGAGGTAAAACGCCATATGAATCAATCTCATTCGGACGATGCTGAAGTTCATTATTGTCTTCTGTGCCCGAAAACCTTTTACAGTATTGAGCATCTAAATGAGCATTTAAGTCGTCATCGTATTACTAAATCTGATATTAAATCTGTTGAAAGCATAATACATTCTACCTGTTGGCCAAATGgtgaaaaattaatcaaatgcAAATTAtgccatcaaatatttgatagtATGGccaatttaaatgaacatttttcaCCTTTATATTCGCAAAACTTGTGTGCTTCTTCACAACATTCTCTTTCAAATTATTCGATAACGAACCAAAAAGGTTTTGAATTGCACTTAGAATTGGATTCAGAAACAGAACCAGAAGATGATATTGACATTGGTTGCAATAATAAAGACAGCAAGTTAAAATTGCATCCCTATACCTGTTCAGTTTGTGATATATCGTATAGGCGCAAATATCAAATGGCTCAACATCAACGTTCAATGCACAATTATGAAAGTTTAGCTTTAAAATGTGAACGCTGTTTATTTAGAACTGTGTGTCAGaAAATTTTAGACTATCACCAGACAACACAATGTTTTAATGAAGAGAAACAATATGAATGCGCTgattgcaaatttaaatttatgtggCAAGAAAATCTTAATAATCATTTAGCCATCTTACATCCAAAAAAAGATGAATCAACGGAAGAGGATGTCGCTCAATTAACCAATAAGGTGGTTATGCCACCgcctaataataaaaatgatcaCCACATTTTTGAATGCATGGACTGCCATCGCCGCTATAATCGTAGAGATCGTTATAAAGcacattttaaaaagtttcaCACTAATGATATGCAATTGACAACGGACTCTAATACAAAAGTTCGCAAAAGCGGaataacaaaacaagaaaagaaatatttatgcgCGTTTTGTGGTCTTTCGTTTTCCAATAATTCAAATCTTACGGTACATATGCGACGTCATACCGGCGAAAAACCATTTAAATGTGATCTTTGTGATATGGCATTTCCACGTTCATCAGATGTACAGACTCACCGACGCACCCACACGGGGGAACGTCCCTTTAAATGTATACATTGTGATAAATCATTTTCGCGGCAATACAAATTAAATGTTCACAATCGCATACACACTGGCGAACGTCCTTATAAATGCACATATTGCTCAAAATCATTTATACAATCGAACGATTTAACTTTGCATTTGCGTCGGCATACAGGCGAGAGACCATACTTGTGTGATATTTGTGGTGAAGGTTTTATATGTGCCACATCATTAAAACAACATCGTAACACTAAAGGGCATCAAGatgataaaattcaatttaaacagTGCATGCAACAGTTAACCCAATTTGATATGAAATTCTAA
Protein Sequence: MERVNQSDCIINGVHYKCRTCFDPGATVCTLSEEYKNTKNWGDLLRAVGQLTTTHDHLLPKTMCCLCSEKLQSSYEFVRQIHSVNRKFLKLLNISEDPLQDGFQSDNEAFSDCLEESTIDLPLEQYIPEIKLEDDLEGTNTMLEEEADHNYISEKEIIKSDSEQSDCNRKYKTRLSKEQSLDDYCNDNDYDNEKNQPVKRRKGRQAPDYFDKIEKVDDRFVCLICQKSFSLRKDCGRHIASIHLRQIIFPCEFCGQSFSRKDKIQQHIKRMHSDRPFYPKSKQREFLFGDRLYSKPTTWHLVECRLCNTNFSSTKHLKQHLLEHSNVETLASLELDSKIVQHLFSHTNDLNVIKENICRDIRDKHWFKYYNVLNEYSFEMSISDTEVEDLECETEQCSNKYKCELCNKQFSFKFQAFSHLKEAHIEADIPYKCGLCKMEFVSLKMYEHHGKTHCRNKHKILVCTSCPAKFAWPENMKNHNCAAKVVVPLTTDKKVFKCNICDRIYEVKTKYEKHLQSHKDGSIASTKTIIKCGLCIKSFERLSQLREHMPIHADGKTGIDFKGSIYIKRFERSKTLDYALLQQEIQNAYRKSQISRFYRAMDRDGNEMDILDSDSEEEELSVCNKQNMKKEYKCELCLEIYKKRKLLLNHQFLMHNDVPLPYTCNSCTQQYVSNDLLQQHLLRDCWNEHRRVAQQCEFCNARFIWPNNFLKHKEIQHKPQKNARPQTASTLKCEFCEKVFIWPKDLVRHRRTHTEGKKFSCPHCERKFQRKDNLLAHIRLHDPESLSMILNSNKTIDYILPHLLKPHGCKQIKCMICYSDHNRIRDLRSHLRSHRYKINFEKRKETETSDSISAQLYPDERAMSEEDLVKRIGSDIAAANNLERFYSITNENGYEVNLDSSETESDSDDNGGYEDIGNEEMSRRFYKCDLCPSLSFNRKFKFFDHQNKAHTWEEARHICVHCNARFLSSYMLQVHYKNQCKNTKKRHFCRRCPLRFMWKNNLKIHFMMEHGQELTKDSDSIRRTECFLCQEKFFNQWEVKRHMNQSHSDDAEVHYCLLCPKTFYSIEHLNEHLSRHRITKSDIKSVESIIHSTCWPNGEKLIKCKLCHQIFDSMANLNEHFSPLYSQNLCASSQHSLSNYSITNQKGFELHLELDSETEPEDDIDIGCNNKDSKLKLHPYTCSVCDISYRRKYQMAQHQRSMHNYESLALKCERCLFRTVCQKILDYHQTTQCFNEEKQYECADCKFKFMWQENLNNHLAILHPKKDESTEEDVAQLTNKVVMPPPNNKNDHHIFECMDCHRRYNRRDRYKAHFKKFHTNDMQLTTDSNTKVRKSGITKQEKKYLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCDMAFPRSSDVQTHRRTHTGERPFKCIHCDKSFSRQYKLNVHNRIHTGERPYKCTYCSKSFIQSNDLTLHLRRHTGERPYLCDICGEGFICATSLKQHRNTKGHQDDKIQFKQCMQQLTQFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -