Basic Information

Insect: Metopia argyrocephala
Gene Symbol: su(Hw)
Assembly: GCA_963576795.1
Location: OY756211.1:115077326-115091113[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7 8.5e+02 1.9 3.2 1 20 73 92 73 94 0.93

2 20 0.00015 0.019 16.5 0.6 2 22 144 164 143 166 0.88

3 20 0.055 6.7 8.5 0.1 1 23 172 194 172 194 0.96

4 20 2.5e-05 0.003 19.0 0.1 1 21 201 221 201 222 0.96

5 20 0.0015 0.19 13.4 1.5 6 23 236 253 234 253 0.97

6 20 2.9e-06 0.00036 21.9 0.5 1 23 259 281 259 281 0.99

7 20 2.1e-05 0.0026 19.2 0.4 1 23 285 307 285 307 0.97

8 20 0.062 7.6 8.3 0.5 3 23 343 364 341 364 0.96

9 20 0.0019 0.23 13.1 1.9 1 20 781 800 781 801 0.95

10 20 1.2e-05 0.0015 20.0 0.4 3 23 853 874 851 874 0.93

11 20 0.17 21 6.9 0.4 1 23 880 902 880 902 0.93

12 20 3.2e-05 0.0039 18.7 3.6 1 21 909 929 909 930 0.94

13 20 9.6e-06 0.0012 20.3 0.7 2 23 942 963 941 963 0.97

14 20 9.1e-06 0.0011 20.4 4.7 1 23 974 996 974 996 0.99

15 20 0.00012 0.015 16.8 0.8 1 23 1002 1024 1002 1024 0.97

16 20 2.6e-05 0.0032 18.9 1.0 1 23 1030 1052 1030 1052 0.99

17 20 3.4e-06 0.00041 21.7 1.5 1 23 1058 1080 1058 1080 0.98

18 20 3.7e-05 0.0045 18.4 0.6 1 23 1084 1106 1084 1106 0.97

19 20 0.042 5.1 8.8 0.5 2 22 1127 1147 1126 1150 0.91

20 20 5.6 6.9e+02 2.1 0.2 3 23 1165 1186 1163 1186 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7	8.5e+02	1.9	3.2	1	20	73	92	73	94	0.93
2	20	0.00015	0.019	16.5	0.6	2	22	144	164	143	166	0.88
3	20	0.055	6.7	8.5	0.1	1	23	172	194	172	194	0.96
4	20	2.5e-05	0.003	19.0	0.1	1	21	201	221	201	222	0.96
5	20	0.0015	0.19	13.4	1.5	6	23	236	253	234	253	0.97
6	20	2.9e-06	0.00036	21.9	0.5	1	23	259	281	259	281	0.99
7	20	2.1e-05	0.0026	19.2	0.4	1	23	285	307	285	307	0.97
8	20	0.062	7.6	8.3	0.5	3	23	343	364	341	364	0.96
9	20	0.0019	0.23	13.1	1.9	1	20	781	800	781	801	0.95
10	20	1.2e-05	0.0015	20.0	0.4	3	23	853	874	851	874	0.93
11	20	0.17	21	6.9	0.4	1	23	880	902	880	902	0.93
12	20	3.2e-05	0.0039	18.7	3.6	1	21	909	929	909	930	0.94
13	20	9.6e-06	0.0012	20.3	0.7	2	23	942	963	941	963	0.97
14	20	9.1e-06	0.0011	20.4	4.7	1	23	974	996	974	996	0.99
15	20	0.00012	0.015	16.8	0.8	1	23	1002	1024	1002	1024	0.97
16	20	2.6e-05	0.0032	18.9	1.0	1	23	1030	1052	1030	1052	0.99
17	20	3.4e-06	0.00041	21.7	1.5	1	23	1058	1080	1058	1080	0.98
18	20	3.7e-05	0.0045	18.4	0.6	1	23	1084	1106	1084	1106	0.97
19	20	0.042	5.1	8.8	0.5	2	22	1127	1147	1126	1150	0.91
20	20	5.6	6.9e+02	2.1	0.2	3	23	1165	1186	1163	1186	0.93

Sequence Information

Coding Sequence: ATGGATCAGTACGAAATGGAGATTGTAAAACAAGAAACTAAAACAAATGACTTTAAATCAACCGTAAAGGAAGAAGATAAATTAATAgaagatataaaaatagaaattctacAAAGCAGTGACGATGATAAACACAAGTTATCTAATGCAGATACGGAAGAATTTCAATTAAGCAATGATGATAGTAATTCAGATTCAGAGCAGAAGACTATTCAACATATCTGTAAAAATTGCTGTAAGCCTTTCTGGAGATCTCagagTCTTCAAAAGCATTTGGAGTTTTGTCGTTTCAATAGCAATTATCACCTTCGAAAAGcggaaatgttaaaaaacttgGAGAAAATTGAAAAGGATTCCattataatggaaaaaaaagaTGTTTGCTTCTGCTGTGGGGAAAGTCGTGAAACTTGTcacGTGGGTCATATTACTTGTCCAGATTGCACGAAATCATTTAAAACCCAAATAAGTTATGAGCGTCATGCTTTTTTAACACACTCAGAGTTTGATGATTATCCTTGTAGTATTTGTAATGCTAAGTTGCGTAGTGCGAATCTTTTAATACTGCACGAGCAACAGCATCGTATTCGAGGTAGACCCTATGTTTGCAAACTGTGTGGAAAGGATTTTATACGACCTTATGACTTGGTTGCTCATCAGAAATACACATCTTGTTCGGCTAGTAATGGCGAAAATGTCGAATCTTGTAAACGATCTTTTACAACAAAACTTACTTTACAACGTCACATAAAACGTCATACTGGCGAAAGGCCATATGAATGCGATGAATGCAGTAAAAGTTTCATAACACCAGTAGAACTTCGGTCTCATAAGAAAACTCATTTCAGACCGTACGAGTGTAATGAATGCCCCGAGAAGTTTAGAACTGAAAGGCAACTGGCACGCCACGTAAAAGATCATGATACCGTTGAACAAGAGAGTGATGAAGCACAGAATAGAAAACGCACACATTTAGGCAGAAAATGtgcacCTGCAAAACATCCTAGAAGAAAAACTCGTACTGATTGTCCAGTTTGTaatcttaatttttatacagAGCAAACATTAcaatttcatatacaaacatttCATAAAGAAGATCCTGAAACATTTCTAAATGAAAATTCCGTTCATACTGAGgaacacaataacaaaactgATGTCCATTTAATCGCCTCTCCTAATATTATCAAAATTGAAGACAGTCCAACTAATCGTATTGAATTTGTAACCAACACCACCGCCAATAATACAATCATTCACAGTTTAAAACAACAGAAAACGTATAAAACTTCCAATAATAttgcagaagaaaaaaataaagttaaaacttTAGGGGATAATGCAATGGAAAAAAACCTAATAAAATCGGCGAATGGGTCCAAAGGAACTATTTTCTTAGACAATAAAGAATTCACTATTACTTCTTTGGACTCGGATGGTGATATCGTTGAATCAGTAACTACAGGAACAATTTCTAACATTCCAAGTTCTGATTCGAACAAAATACGACAGAAAGCATTGGCGAAAAGTTTAGCTGCCGCTATTGCTGACGGTGATgacattaaagaaaataaagagaaGAAGGAAACATTTTCTGAAGaggacttaaaaattaaagataaagTCAGTAAACTTTTAATTATGCTGGTAGATAGcataacactaaaaaaatttggATGGCCTAATGCAACAGAAGAAATAgtccTATGTAAAGTTATTCAAAATTGTGGTCATGATTTAACAAAAGATCAGCAAAATTATAGTAAATACGATTATGCTAATCGTATGCGAGAATACGTTAAATTACTTCTCACTGTTGTCATCCACGATGATTCCATTAAAGAACTGCTCAACGATCATGGAATTGATGAAGTTATTGAATGTGTTTTAGATGATTACGATGACGATGATGTAAATGATAAGAACATTAAACGTGAAAGGACgtCAACAGCCGCTGAAATGGAAACAGAAAAGGATAAGATATCCTCTAAGAAAACCACAAATTcagttataaaaatacttaatgATGAAAAAATTACGCCAATAGCTCCACCTACTCCTGTGATGACATCTGTGCCAGTAActtcacaaaaacaaattaccaTGTCCAttgcaaaaccaaaaaaaatgttaaagcaaaAGAACATGGATCATTATGTGATGAAAACTGTTAAAGGCGAGAAAAACACTGATACAGGAGAGGAGGAAAGcgaaacaattgattttatattggccgataatgaagaagaagaatttaattcaaatggaGAGATCACCCAGGAATTACATCTTAGTGATGATGATGTAGAAATCGCCTCAACACAGGAAATTCTTGAGCATGTTTGTGGCAAATGTTTTAAAACCTTCCGGAAACTTAATagtttGAAAAAACATATAGACTTTTGTCGTCTCGATAGTAGTTATCATCTTCGCAAGgctgaaatgttaaaaaatttagagaaaattgaaaaagatgCCTTTATAATGGAGAAAAAAGATGTTTGCTTTTGTTGTGGCGAAAATTATGATACGTTTCATttagGACATATTAATTGTCCAGATTGCCCAAAATCATTTAAAACCCAAATGAGCTATGAACGTCATATATTTATAACACATTCGGAATTTGATGATCATCCCTGTAGTATTTGTAATGCGAAATTGCGTAGTGCTAATCTTTTGAAATTGCATGAAGACCAACATCGTAATCGAGGTAAACCATTTGCTTGCAAGATATGTGGTAAAGATTTTACACGTTCCTATCATTTGAGTCGTCATCACAAATTCTCATCATGTTCGGCTAATGAAAATGATTCTATACGTTGTAAAGTTTGTGACAAAGCTTTTTTTCGTTTGGATAATTTGCGTGTGCATTTAAAACAACACTTTGGTGGCCAAACTCCCAAAAAATCAGAATATACATGTCCTACATGTAAGAAATGTTTTTATAGCTTATCGACCTTAAAcatTCACACTCGGACACATACAGGTGAAAGACCATTTGATTGTGATTTATGTGAAAAAAAGTTTCCATCGCTAGTGGCTTTAAAAAAGCATAGGCGTTATCATACAGGAGAAAAACCCTATACATGTTCAGTGtgtaaaCAATCGTTTGCTGTGAAGGAGGTATTAAATCGTCACATGAAACGCCATACTGGTGAAAGACCACATGTGTGCAGTGAATGTGGTAAAAGTTTTATACAGGGGACACAACTTCGCACCCACATCAAAACACATATAAGACCATACGCTTGTGAGGAATGTTCTGAAAAATTCAAAACCGAAAAACaATTACTTCGGCATATTAAAGAGCATAATGTTGCAAGGAGAAGAAAAGACTCCACTCAGAGAAAGGGAGCCAAACGTTTAGCAAAAAGATGCGATATATGTAAAATTGGATTTAAAACCGATttagaatatgaaaaacatatgAACCAAAATGTTCATACAAcACCCGCCGAACgtcgtaaaagaaaaaatcgtacCGATTGTGCTGTTTGCAAACTTAATTTTGATTCAGTACAAAGTTTACAATTCCATATACTGAAAGTTCATCAAGAAGATCCCGAAACGTTTATAAACGAAAATGTTTTTGATAATAATGATACAAGGTTAATGCCACCaccaaaagttattaaaattgaaGATGCTCAGGGTCAACGTATTGAATTCGTGACCACTAATTGTGAAGGAAAGATATTAAATACCAACATAAAGGGATTACAAGAGCAGCAAGTACTAAAAACTGCTCAAAATAATACAGAGGAGAACAAAGTGAACATTATAGAACAATATATAATTGAGCAAATCCCTTCGACCTCAAAGAGTGTCGCTAAACAATCGTTCATTTTGCCCAACGAAGCATTTACCGTTATACCTTTAGAATCAAATGGTGGTATTATAGAACCCATAACTTCAGAAAGTTTGCCTGCAATTGTAAGCTCtgagaaaaaaaaggaacaacgAAAGACATTGGCTGAAAGTTTAGCTGCAGCTATAGCCGACAATGATGAGGAAATATTAGAAAATGCAACGGCAGAAAGTCCAACACTTACCgaagaagaattaaaaattaaagacaatGTTAGCAAATTACTAGATATGTTAGTGGATATcaaaacactcaaaaaattCGGCTGGCCAGATGTGACAGAAGAAATtgTTCTTTGTAAAGTAATTGAAAATTGTGGTCATGATTTAACTAAAGATCAGCACAACTATAGCAGTTATGATTATGCCTCTCGCATGCGTGAATATGTTAAATTACTATTCACGGTTGTCATACACAATGATTCTATTAAAGAACTTCTGAATAATTATCCAATTGATGAAGTTATCGAATATGTATTGggcaatgatgatgatgatgatgatgataatgatgatgacgaCGAAGATGAAGATGAACATAAAGAACATGATAAAATCATTAAACGCGAAAAGGACGTttag
Protein Sequence: MDQYEMEIVKQETKTNDFKSTVKEEDKLIEDIKIEILQSSDDDKHKLSNADTEEFQLSNDDSNSDSEQKTIQHICKNCCKPFWRSQSLQKHLEFCRFNSNYHLRKAEMLKNLEKIEKDSIIMEKKDVCFCCGESRETCHVGHITCPDCTKSFKTQISYERHAFLTHSEFDDYPCSICNAKLRSANLLILHEQQHRIRGRPYVCKLCGKDFIRPYDLVAHQKYTSCSASNGENVESCKRSFTTKLTLQRHIKRHTGERPYECDECSKSFITPVELRSHKKTHFRPYECNECPEKFRTERQLARHVKDHDTVEQESDEAQNRKRTHLGRKCAPAKHPRRKTRTDCPVCNLNFYTEQTLQFHIQTFHKEDPETFLNENSVHTEEHNNKTDVHLIASPNIIKIEDSPTNRIEFVTNTTANNTIIHSLKQQKTYKTSNNIAEEKNKVKTLGDNAMEKNLIKSANGSKGTIFLDNKEFTITSLDSDGDIVESVTTGTISNIPSSDSNKIRQKALAKSLAAAIADGDDIKENKEKKETFSEEDLKIKDKVSKLLIMLVDSITLKKFGWPNATEEIVLCKVIQNCGHDLTKDQQNYSKYDYANRMREYVKLLLTVVIHDDSIKELLNDHGIDEVIECVLDDYDDDDVNDKNIKRERTSTAAEMETEKDKISSKKTTNSVIKILNDEKITPIAPPTPVMTSVPVTSQKQITMSIAKPKKMLKQKNMDHYVMKTVKGEKNTDTGEEESETIDFILADNEEEEFNSNGEITQELHLSDDDVEIASTQEILEHVCGKCFKTFRKLNSLKKHIDFCRLDSSYHLRKAEMLKNLEKIEKDAFIMEKKDVCFCCGENYDTFHLGHINCPDCPKSFKTQMSYERHIFITHSEFDDHPCSICNAKLRSANLLKLHEDQHRNRGKPFACKICGKDFTRSYHLSRHHKFSSCSANENDSIRCKVCDKAFFRLDNLRVHLKQHFGGQTPKKSEYTCPTCKKCFYSLSTLNIHTRTHTGERPFDCDLCEKKFPSLVALKKHRRYHTGEKPYTCSVCKQSFAVKEVLNRHMKRHTGERPHVCSECGKSFIQGTQLRTHIKTHIRPYACEECSEKFKTEKQLLRHIKEHNVARRRKDSTQRKGAKRLAKRCDICKIGFKTDLEYEKHMNQNVHTTPAERRKRKNRTDCAVCKLNFDSVQSLQFHILKVHQEDPETFINENVFDNNDTRLMPPPKVIKIEDAQGQRIEFVTTNCEGKILNTNIKGLQEQQVLKTAQNNTEENKVNIIEQYIIEQIPSTSKSVAKQSFILPNEAFTVIPLESNGGIIEPITSESLPAIVSSEKKKEQRKTLAESLAAAIADNDEEILENATAESPTLTEEELKIKDNVSKLLDMLVDIKTLKKFGWPDVTEEIVLCKVIENCGHDLTKDQHNYSSYDYASRMREYVKLLFTVVIHNDSIKELLNNYPIDEVIEYVLGNDDDDDDDNDDDDEDEDEHKEHDKIIKREKDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -