Marg010677.2
Basic Information
- Insect
- Metopia argyrocephala
- Gene Symbol
- ZNF711
- Assembly
- GCA_963576795.1
- Location
- OY756208.1:195882380-195896383[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 9.7 1.2e+03 1.4 0.5 2 23 417 439 416 439 0.91 2 27 0.043 5.3 8.8 0.1 6 23 449 466 449 466 0.99 3 27 0.00011 0.014 16.9 3.4 1 23 472 494 472 494 0.98 4 27 4e-05 0.0049 18.3 2.9 1 23 506 529 506 529 0.92 5 27 4e-05 0.0049 18.3 2.0 1 23 537 560 537 560 0.98 6 27 4.1e-05 0.005 18.3 2.1 3 23 568 589 566 589 0.92 7 27 0.036 4.4 9.0 0.4 2 23 601 623 600 623 0.96 8 27 0.0028 0.34 12.5 5.2 1 23 630 653 630 653 0.93 9 27 4.1e-06 0.00051 21.4 0.7 1 23 659 681 659 681 0.98 10 27 0.00023 0.029 15.9 1.3 1 23 687 710 687 710 0.97 11 27 0.021 2.6 9.8 1.1 3 23 801 822 800 822 0.89 12 27 0.023 2.9 9.6 1.3 2 23 831 853 830 853 0.95 13 27 0.00028 0.034 15.7 3.1 1 23 860 883 860 883 0.93 14 27 6.1e-06 0.00075 20.9 1.7 1 23 889 911 889 911 0.98 15 27 2.3e-05 0.0028 19.1 0.9 1 23 917 940 917 940 0.97 16 27 1.8e-05 0.0023 19.4 3.6 3 23 1018 1039 1017 1039 0.94 17 27 0.012 1.5 10.5 0.4 2 23 1048 1070 1047 1070 0.96 18 27 0.0013 0.16 13.6 3.9 1 23 1077 1100 1077 1100 0.93 19 27 4.1e-07 5e-05 24.6 0.8 1 23 1106 1128 1106 1128 0.98 20 27 0.006 0.74 11.5 0.3 1 23 1134 1157 1134 1157 0.97 21 27 0.072 8.8 8.1 0.3 2 23 1221 1243 1220 1243 0.96 22 27 0.04 5 8.9 2.2 1 22 1250 1271 1250 1273 0.89 23 27 0.74 91 4.9 7.9 3 23 1302 1323 1300 1323 0.92 24 27 0.0095 1.2 10.9 0.9 2 23 1335 1357 1335 1357 0.96 25 27 0.00048 0.059 14.9 1.2 1 23 1364 1387 1364 1387 0.94 26 27 3.8e-05 0.0047 18.4 1.2 1 23 1393 1415 1393 1415 0.98 27 27 3.2e-05 0.0039 18.7 5.3 1 23 1421 1444 1421 1444 0.98
Sequence Information
- Coding Sequence
- atGGTCGCTAAATGCCTATTATGCCTTGAATGTCCAACTATTCCGGGTccgaaatttttagaaatatttggaGATGAAGGCCTTCGTCTGGACATAAGCGCtattattaataaacatttttggttAAAGGCAAACAAAAATAGTGAAGATGTACAAAAAATTTGCATGATATGTTGGGAGATAGTGAGAGATTTCCATATATTATATCAAAGAGTAGAAGAAGTTCACAGGGACTTGGAGACAAAGGCTGTAGAATTAGACGATCCATTACCTCAAGATGTTTTACTCAAATCTGAAAATTATCCTTCCACGGTACAGGATCCTATTATGGAGGAAAATGTTGCTATATTTGATTCAGAAGTAAAAGTTGAGGTACACGACTTGGATCTTTTACCACAAATAGAAATACTAGAAACAGAGAATCATAATACTTCGGAAAAAACTAACAAACTAAATAGGCGCGGACGTCCTTCGACAAGAGAACAGAGTATTAAGACCTCCGCTAAAAGAATAAAGAAGGAACAGTCTCCTAATGTATTGCTTACAAATAATATCACTGATGATTTGTCGGAAAATGATATTGAACATACATCAAGTGATGCCTTAAACACTTCCGGGTTATTAGAGGATAGCAATATTCAACTATTATCAAGTTCTTTAGATACAATAGAGAAAGAAGAAGGAGTTAGTGTtaaaaaaagaggaagaccTCGAAAGGGAGACACTGAAAGTATAAAAGCAAACACCACTCGTGTAAAACGCATAAAGAAACAGCACCAGCAAATAACGTATACAatggaaattgtaaaaaatgaaaGGGATTCGGAGGAGGAGCCATCTTGTTCAACAGCACAAACTGGTGTTGAAGAAAACTCAGAAATAAAAACAGAGATCTCCAATGAAGAACAACATTTGAATGAAATGTCTGCTGTAGCAGATCAATTTGATGATGATGCGTATGTACAAGATGATTTTGAAGACGACGATAACTACCAAAAGCCTTCTGATGAATCTTCAAATTCCGATTCAGAATCAGAAGATTCTAATGCGTCTGATTGGGCGGATAataatggaaaaaaagaaaaatttgcggttataaagaaaaaagaacgtAATACtcccaaaaaatataaaaagagagATAAACCTTTAGTTGAACCTAAACGTATGAGTCGGGAAGAAATTGAAGCCAGACAAGCACAACAAGCTGAGTATGATAATATcataacaaaattcttcgaaaaAATACGTTGCCCCAAATGTGAGCTCTTGGTGCATACTTTTGGAGAAATGCGAGCTCATTTCCGTTTAGATCATAATGATGATCATGGTTTTGTAGAATGTTGTGGTCGCCGGTTTGCTACACGTAAATTTTTAGCTGAACATATTTTAGTCCATTATAATCCAGAACATTTCAAATGCAAAACATGTGATAAAGTTTGTCGCGATTCTACACAGCTAGAGAGTCATGAACAATCTCACTTACCCAATCCTCCTTCGAAATACAAGAAAACGTTCCAATGTGAGAAATGTTCTAAAACATTTTCCTCCAAAGCTTCTTTCGAACATCATATGGTTGCTAAACATGTACCGCGAGAAGAGTTTAAATTTGAATGCCCCGAATGTAAGAAAAAATGTCCAACTGAGACTAAACTGAAAGATCATATGCGTAGCGTGCACGATCCTCAAAGGACAGTAATATGTGATAAATGTggcaaaacatttaaaagtacCTATAGTCTTAAAAAACATCATGAACTTGAACATTCTGATATTCCCAAACCGATTCCTATTCCCCAACAGTGTGAAATCTGTGGTGCATGGTTGCGGCATTTGTCGGGCCTTAAACAgcatatgaaaaatattcatgAATCGGTTCAAACAGAACATCGTTGCCATATCTGCAGTAAAGTCTCTTCAACAGCTAGAGCGTTAAAAAGACATATTTACCATAATCATGAGTGCATACGAAAATTCCAATGTACTATGTGTGATAAAGCATTTAAAAGAGCGCAAGATTTAaggGAACATACATCTGTACATACAGGTGAAGTTTTATACACCTGCCCTAACTGCCCTATGACTTTCTTTTCTAATGCTAACATGTATAAACATCGACAGCGTCTGCATCGTGCCGAATGGGAGGCGGATCGCAGTAAACCTATACCCCCAAATATTATGAAACAAGCTAAACAGGGTAGTAAATTGGTTAAAACAAAACGTGGTACTACAGAAAGCTCAGCCTCTCCATTAGTAGCACCTGAGCCGACAATAGCTTCAACTGCGGCGAACGCACTACATCCCATTATAAATCCACAAATATTATATGCAAACATATGGCCATCAAGTGCTAAACTACGTAAACATATGTATTGTCATGATACGAATAGACAAAAGATATGTGACCAATGTGGcaaaacttttgcttgtaaCTCCAGCATGCGAAAACATGTCGATGCAGAACATTCCCAGTTAAAACCAGAACCTCAACAATGCAAAATATGTAATACCTGGTATCGCAATATGTCTGGCCTAAGGACGCATATGAAATTTATGCACGAAAATATTGGCGGTGAGCATCGATGCCATATATGCAATAAAGTTTCGAGAAACGCCCGAGCTCTGAGaagacatatttatttaaatcatgaatgtgaaagaaaatacaaatgtCACATGTGTGAAAAGGCCTTCAAACGTGAACAAGATTTAAGAgAACATATTTCTGTGCATACTGGTGAAGCCTTATATACATGTCCCAATTGTCCTATGACATTTTCGTCTAGCGCTAATATGTATAAACATCGTCAACGTTTACATAAGGCTGAATATGCCGCTCATAAACAACAACCAATGGCTGTAAATATTATACAACAAGCTAAATCTGTACCCAATACTGTACGCACCAAAAGAAGAATGATTGCTGATTCACAGATACAACAACCGCCTACAACATCATTAAATTCGCAACTTTTGCTAAATTCACAACAATCTTCTGAAGGTAAATTACGCGAACATATGCACAGTCATGATTCAACAAAacgtaaaatatgccataaatgcggtaaaacatttaaaaataagtacaaTATGAAAAAGCATGAAGAGTCTGAACATTCTGAGGTAAAACCAGAACCTCAACAATGTACCATTTGTAATACATGGTATCGCAATTTGTCCggtttaaaaattcacataaaaaatatgcatgACAATGCTGCTGCTGAACATCGCTGTAGTATTTGTAATAAAGTTTCAACAACACATCGGGCCTTAAAAAGacacatttatttaaatcatatatgtgaaaaaaaatttaaatgcaatataTGTGATAAGGCTTTTAAAAGGCGACAGGATTTAAGAGAGCATATATCAGTGCATACCGGTGAAGCTTTATATACTTGTCCGAATTGTCCAATGACATTTGCATGGAGTGCTAATATGTATAAACATCGACAACGCGTACATAAAGCTGAGTATGCCGCTTATAAACAACAAAGTATGCcaccaaatattataaaacaagcTAAATCTGGTGCTTTAAATAAAGTGCATCATAAAAGACGTTTTGTTGGGCACTCAAATAGTGAATCTCAAACAAACCTTGTTATGAACTTACCTGAACCTAAACAGAAACTACAGGATAAAGATCCTCAACAATGTCCTATCTGTTTTAAATTACTGAGAGGTATGAAGGGTCTTAAAGctcatatgaaaaatattcatgcAACTGGGGAACAAGAACATCGCTGTAAAATTTGTAATCACGTATCAACAACAGCTAAGGGTCTAAGAGTTCATGAAATATTTCGCCATGAAAAGGAAAGAAAGCATAAatttccGACAGCAAAACGTTTGAGTGTACATGAAAATATCCATAACCCACAAAACATTGTTATATGCGATAAATGcggtaaaatgtttaaaaacaaatgtcgCTTAAGATTTCACCACAGACACGATCATTCCAGTGAACCAAAACCAGAAAAAATTCCAGAACAATGTCCGATCTGTGACAAGTGGTACTCCTCTAAATCGAGTGTACATGAACACGTACGAAACATGCACACATACAACGATGTCGAACATCGTTGTCCAACGTGTGGTTTCGTTTCGACCACAGCTAAGGCACTGAAaaagcatattttatttaatcatgATGTCGTTCGCCGACATAAATGTAATTTATGTGAAAAGGCCTTTAAGAGGCCTCAAGATATAAGGGAGCATATGGCTACTCATACCGGTGAACCATTGTATACCTGTGTGAATTGTGGTAAAACTTTTAAATCCAAAGCGAATATGTTTCATCATCGTCGACGTTTTCATAGAGCCGAATGGATTGCCGATCGTACAAAACCTcctaaagaaaaatattcaagAAACTAA
- Protein Sequence
- MVAKCLLCLECPTIPGPKFLEIFGDEGLRLDISAIINKHFWLKANKNSEDVQKICMICWEIVRDFHILYQRVEEVHRDLETKAVELDDPLPQDVLLKSENYPSTVQDPIMEENVAIFDSEVKVEVHDLDLLPQIEILETENHNTSEKTNKLNRRGRPSTREQSIKTSAKRIKKEQSPNVLLTNNITDDLSENDIEHTSSDALNTSGLLEDSNIQLLSSSLDTIEKEEGVSVKKRGRPRKGDTESIKANTTRVKRIKKQHQQITYTMEIVKNERDSEEEPSCSTAQTGVEENSEIKTEISNEEQHLNEMSAVADQFDDDAYVQDDFEDDDNYQKPSDESSNSDSESEDSNASDWADNNGKKEKFAVIKKKERNTPKKYKKRDKPLVEPKRMSREEIEARQAQQAEYDNIITKFFEKIRCPKCELLVHTFGEMRAHFRLDHNDDHGFVECCGRRFATRKFLAEHILVHYNPEHFKCKTCDKVCRDSTQLESHEQSHLPNPPSKYKKTFQCEKCSKTFSSKASFEHHMVAKHVPREEFKFECPECKKKCPTETKLKDHMRSVHDPQRTVICDKCGKTFKSTYSLKKHHELEHSDIPKPIPIPQQCEICGAWLRHLSGLKQHMKNIHESVQTEHRCHICSKVSSTARALKRHIYHNHECIRKFQCTMCDKAFKRAQDLREHTSVHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRSKPIPPNIMKQAKQGSKLVKTKRGTTESSASPLVAPEPTIASTAANALHPIINPQILYANIWPSSAKLRKHMYCHDTNRQKICDQCGKTFACNSSMRKHVDAEHSQLKPEPQQCKICNTWYRNMSGLRTHMKFMHENIGGEHRCHICNKVSRNARALRRHIYLNHECERKYKCHMCEKAFKREQDLREHISVHTGEALYTCPNCPMTFSSSANMYKHRQRLHKAEYAAHKQQPMAVNIIQQAKSVPNTVRTKRRMIADSQIQQPPTTSLNSQLLLNSQQSSEGKLREHMHSHDSTKRKICHKCGKTFKNKYNMKKHEESEHSEVKPEPQQCTICNTWYRNLSGLKIHIKNMHDNAAAEHRCSICNKVSTTHRALKRHIYLNHICEKKFKCNICDKAFKRRQDLREHISVHTGEALYTCPNCPMTFAWSANMYKHRQRVHKAEYAAYKQQSMPPNIIKQAKSGALNKVHHKRRFVGHSNSESQTNLVMNLPEPKQKLQDKDPQQCPICFKLLRGMKGLKAHMKNIHATGEQEHRCKICNHVSTTAKGLRVHEIFRHEKERKHKFPTAKRLSVHENIHNPQNIVICDKCGKMFKNKCRLRFHHRHDHSSEPKPEKIPEQCPICDKWYSSKSSVHEHVRNMHTYNDVEHRCPTCGFVSTTAKALKKHILFNHDVVRRHKCNLCEKAFKRPQDIREHMATHTGEPLYTCVNCGKTFKSKANMFHHRRRFHRAEWIADRTKPPKEKYSRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -