Marg007860.1
Basic Information
- Insect
- Metopia argyrocephala
- Gene Symbol
- lola
- Assembly
- GCA_963576795.1
- Location
- OY756208.1:131162630-131164880[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-09 1.9e-05 25.4 0.0 4 40 425 461 422 466 0.90
Sequence Information
- Coding Sequence
- ATGGGGGGCCCATTAGGCCCAATTTGCTTAAATGGTCCACCAGGGGGACAAACTTTTTGTTTACGCTGGAATAATCACAAATCGAATTTAGTAGAAATTTTAGATTCCCTTATTAAAATAGAAAGTTATGTAGACTGTACCATAGTGGTGGATGATAGGGTACGATTGAAGGCTCATCGTGTTGTATTGGCTGCCAACTCACCCTACTTTCAGTCTATGTTGCAAGATTTGCCCATGGATCATTGTAGTATTATATTGCCTGGAGTTAAAGCCTTTGAAATGCGTGCTTTATTAGAGTATATGTACACAGGTGAGGTTAATGTAACCCAAAGTCAAATACCCGAAATAATGCGCATTGCTGAGGAATTAGAGGTTAAGGGTTTGTTCGATATGGCtgatttaaaggaaaaattcaataatttaggTAAGGAACATACCGAAAGACCAGCCAGTAATCCTAATGCCAATACAGCAGTACCTACGCAGTCTTACTACTCGGTAAACAATGCCAATTCGCCTTCAGCTGGCATAGCAAATGCACAAGCTAGGTTTAAAGAGAGTGATTGCTATCGTAATAATTCCTCTACCGTGATCTCTTCCTTATCTAATATTTCGCCCCCAGCGGCGGCTTCAAGTAGCTCATCGCCACCttgtattaattataataaatatcccTATACCAACAGTCTACATATCAAGTCCCCAGGACATACTGCAAACCAATCTTGCTCTGCCATGCAAGCTCAATCTATTCAACAGATCACTACCAGTAATCTAACGCCCCCCAGTGAACATTCTACCGCCCAATGGCCCTTATCACCTTCTGCAGCCGCTGCTGCTGCTATGCTAAGCTCAGTATATGAGTCTGCCACTGATATGAAACCTTTGAAACGTCAAAAACTCTCCTCTATGCTTATGAATCGTGACACACCCATTTTACGTAATGTTTTAGCTCAGACTATTCCAGGTGACTCTTCACAACAGTCACCTCTTCTAATGCCTAATGCTATAGGTAATAACAAGAACGATAAATCAACGAGTTTAGTTAGTAATAATCTTGATAAGAGTATAGGTTGCCATAgtaataatcacagttttaatGGTTCAGACTATGGTGACAAGaaaTACAATGATGAGTCTCCTTCTCCCATTACTGATCGTTCTTGTGAAGACGATGGTTTTGATCCCAAGGGCAGAAATTGTAATCGTAAACTTGCTAAGAATCCTAATCAAAAACCTGAATGGAAACGTTATAAACAGTACTCACGCAGTGATCTTGCGAAAGCCATAGAATGGGTAAGACAAGGCAACAGCGCTTTGCAGGCCGCGCGCATGTTTAATGTACCTTCACGAACTTTATACGACAGGATTAAAAAGTTAGGTATTATCACAGGCCGTCCTATGAACCGTACCCTGAAACGTAATGCCAGCAGTGTCGAATCATCGGCTGCTTTTCCCTATGCACATGGCTATGGTCAGGCTTCTGCTGCCACTGCCGCTATGCACGATGCTGCTGCAATAGAAGAACGTGAATTAAAAGAACAACAGCGTAGTAATAAACATCATCACTTGCCACCTGCGCTACCTCATCCGGCAGCTGCTTTACTGGATCATGCTTTTTTGCAACAAGCTTTGGAAAATCGCGGAGCTGGTGATATAGGTGGAAGAGAAGCTTTACATGCCATGGCCTTAGCTGCGGCTGCCCATGCTGCCGCCAATCGGATATCGAATAGTCCGGTACCTAATGGTAATACTGTACGATCGCCGAGCCCCACTAATTTCGCCTTAAAATATAATCATTTACGCAATGCGGAACAAGAGTTAATGGAACGTCAAGAGCCTGAACGTGACTATGAAAGAGAACGCGAATATTTAGAACATGAACGCGAACGAGAACATGAACGTGACTTGGAACATAGCGAACGCGAAGAAGATCAAGTAGAAGATTTATCGGTCACACGTAAAGACAACAATAAAACAGCCATAGATCAACGGCTCGAATCACCTTTTTTTCCTACACTGCGCAGCCAAGGTGAAAGTGAAAAAACCGTTATCGTGAGCACTAAACTACCCTCAAATAGAAACAATGATGATTATTCAAACTCCTATAGTAACGAAGCAAATATGAAAAGTGAAGATGTAATAGACGATATACGGGCCGATTGA
- Protein Sequence
- MGGPLGPICLNGPPGGQTFCLRWNNHKSNLVEILDSLIKIESYVDCTIVVDDRVRLKAHRVVLAANSPYFQSMLQDLPMDHCSIILPGVKAFEMRALLEYMYTGEVNVTQSQIPEIMRIAEELEVKGLFDMADLKEKFNNLGKEHTERPASNPNANTAVPTQSYYSVNNANSPSAGIANAQARFKESDCYRNNSSTVISSLSNISPPAAASSSSSPPCINYNKYPYTNSLHIKSPGHTANQSCSAMQAQSIQQITTSNLTPPSEHSTAQWPLSPSAAAAAAMLSSVYESATDMKPLKRQKLSSMLMNRDTPILRNVLAQTIPGDSSQQSPLLMPNAIGNNKNDKSTSLVSNNLDKSIGCHSNNHSFNGSDYGDKKYNDESPSPITDRSCEDDGFDPKGRNCNRKLAKNPNQKPEWKRYKQYSRSDLAKAIEWVRQGNSALQAARMFNVPSRTLYDRIKKLGIITGRPMNRTLKRNASSVESSAAFPYAHGYGQASAATAAMHDAAAIEERELKEQQRSNKHHHLPPALPHPAAALLDHAFLQQALENRGAGDIGGREALHAMALAAAAHAAANRISNSPVPNGNTVRSPSPTNFALKYNHLRNAEQELMERQEPERDYEREREYLEHEREREHERDLEHSEREEDQVEDLSVTRKDNNKTAIDQRLESPFFPTLRSQGESEKTVIVSTKLPSNRNNDDYSNSYSNEANMKSEDVIDDIRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00997835;
- 90% Identity
- iTF_00997835;
- 80% Identity
- iTF_00997835;