Marg009512.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Metopia argyrocephala
Gene Symbol
lov
Assembly
GCA_963576795.1
Location
OY756208.1:169066520-169088237[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.1e-18 1.2e-14 54.8 0.0 1 44 842 885 842 886 0.96

Sequence Information

Coding Sequence
atgttAAAGGAATCAGTTGCAGAGGAAATCATTAAAAGGTGTAAACTGTCGTTAACGACAGCTTTTTCTGCTTACGAGGCAGCTTTACCTTTTACGGACAACACCAACAATAATAGCAACGATATTATTGCCACATTTATTTCACCTGGTAAACCATTTACATCTTTAGCTCAAGACATGGCTTTAGAAACAGAAGCCACCGAGGCATTGGCCTTGACGACTAATTCAGCTTCAGCCACAGCAGCACtaccaataacaacaacaacaccaaatATGTCCAACACAAATGCTACAACAAATACAAGTTTACACTCTTTAACAGCTAATATTAATATGGTCAATAGTTTATTAGCCAATAATGTGACCACTAGACCGGCTACCTCCATACCTGATCACTACAGCCTGAGATGGAATAACCATCAGAATCATTTGATGCGAGCCTTTGATGCTCTATTACAGAGCAAAACTTTGGTAGATGTGACTTTAGTATGCGCAGAGACTAGTATACGGGCTCATAAAATGGTTTTGTCAGCCTGTTCACCATTTTTCCAGCGTGTTTTTGCTGATACACCCTGTAAACATCCAGTTATAGTGCTTAAAGACTTTAGAGGTTGGGTTGTGCAAGCTATAATAGATTTCATGTATCGTGGCGAGATAAGTGTGCCTCAGGAGAAATTGCATACTCTCATAGATGCCGGAGAGTCTTTACAGGTTAGAGGTCTGGTAGAAAGTTCTATACCCGAACACACGCCTACACCAGCCGCTTCTCCTGATGATTTTAATCTTATAGACACTTCCATATTGTCTTCCGAACTAGAAAGATGTTCCAGTTTCGATGAGGAATCTCCCTCTATGGTTACTGCAGGCTCCAAAATTATACTGCCCTCACGTCTTTTCAGTTCCTCATACAGGCGTGAGAAGGAGCAGCGCAAACGTGAAAGGGAGAAGGATGTAATAGATCATGCTTTAGAGAGTGATCATGATTTAATAAATGATTCTGTTAATCACAATGATTTATGTACCTCCCCCTTGCCCAGAAGAAAACAAGCAAGGCCCAGAAGAAGATCAGGGGAATTAACGCATGACTTAGTAAACTCCATTAAAGTACCCACGCCCCAGCCAATAAACGATAGCTCAAACGAACAACCTGAAGACTTGTGCAAAGACTCTAAAACAACTGATAATCAAGAATGTAGAGTAACTGAAGAACCTTTAAAAACTGTGATTAAATCTGAAATGATGGAAGCCATGGAAGACGAAAACATGGATCAAGTAGGCGAAAGGGATAGTGGCAATGATAGTCATGAACAGGCTGAAGATTTAATTGTCAATGACAAATCTATAGATAATCTTACCAATAATTcgaataatttgaatttaaactcCAGCCATGACTTAAGTCAAGAGCCTGGGGTGGCTGAGCAACAGCAAGAGCAAGAACAGGAGGAACAagaggaggaggaggaggaGGAAGAAGAAGAGGAAGACCCCGAAGAAGAAGAAGATATTGAACAGCTTATACATCATACCAATGAAATGAATAGAAGGCGTAAATCGGCCCTATCAATGCAGTCGGAGGGTCCGGAAGATTTGTGTACAACGAAAAAAGACAACGACACCAGTGGCCATCATTCGGCTTCCGATAATGAGGATACgacaaacaacaataataataacaatagcgcaaaattaaataacaataacaatcgTATAGTCTTATCGCTGAAAGACATACGCCAATTGAATAAACCCTCTTCATCATCTACACCAAATTCACAGAACAATAGCCTTAATCCTTTTTCTACAGCCAGCCTAAGAGATCTCAGATTAGATAGGGAAAGGGCTTTAGATACACAATGTAAAATGGAGGTGTTGGAAGCGCAAATGCAGGCAGCAGCCGAGGCGGCAGCTGCAGCCGCTGCTAGAGGAGAAAATCCTTTTCAGCATATGGAACATCAAATGGATTTATCACTGGCAGCAGCAGCTGCTGCTGCGGCAGTTTCACAACAGCATAGTAGAGAACGTGATCAGGCTTTACAGAGAGAACAAAGAGAAATGCAACAACATAATGCATATGCCAATAGTATTTTGGGACAAATGGGTATGCCAGGCATAACGGGGCCCTTTGGTCCCAATGCAACAGCACCTAGTTGCCCCACTGGACCCTCTGCTCATGAACGCTTAGAGGAGTCCATGAATCGTCTGAGTAAAGAATTTACACCCACATCACCTATGAGCCTGCCACCGCACTTTAATCCACAAGATGGACCACCGCATCCTCCTTCGCCGTTGCCCTTTCCCGGTATGTCTTCATTGGCGCTAACTCCGCCGCACAtgTTTGGCTTAGACTCACCTTTGGGTTTATTTCCACCAGGCATAGATCCCGGCAAGTTGTATAATCCTTTAATGGAAATGTCTGATCCAAGAGGCATGCCTGGTGATGCGCCGCCATTtctgaaaaagaaaaTGCCTCGACCTAAAGGTCAACATTCAGCACCACGTGGAGGACCACCCCGCTCTTGGACTAATGCCGAATTGACAGAGGCTTTGCAGCATGTGTGGAATAAAAAAATGACCACTTCTCAGGCCTCTAGAATCTTTGGCATCCCCTATAATTCTCTGCTTATGTATGTGCGCGGCAAATATGGCAAGTCTTTGAAATTGGAACAGTTGCGCAAAGATTGCATAAGTGGTCCCCCCTTGGAAATGTTACAAATGGGTATATCCGGCTCTAGTAAAAACTCTAACGAATCAAAAGAACAACGAGAGGCACGCAAAGAGGCTCAACGTAATGCTGCCGccgcagcagcagcagcagctgcTGCAGCATCCCAAAATTCTTCGAATGATTTGGATTTGGTAGGTCCTATGCCCGGCGCAGGGCCCAGACCGTCTAGTTCTGAACCTGACTTATTGGGAGGACCAAATTCCCTGTTTAATCCTTTTAATCCCCAAGGCTTTTATCCCGACTTTCCAGGTGGTTTTCCGGGCTTGCCTCTAAGTATGTTAAACCTTTTACCACCCTCAGAGAGACAACATGCCGCTGCAGCGGCAGCTGCTATGCATCATTCCATGGGCTTAGATGAGGACTGTAAATCGGATCGCTCTAAACAATCTTCCAATATGGATGATGAATTCTCTTTGAGCAGAGAAGAGCGACGTCATacagatttattaaataacagCTCAGTACCCTCCGTTTCATCCCAACAAAATGGTTCAGTGCAAGATTGA
Protein Sequence
MLKESVAEEIIKRCKLSLTTAFSAYEAALPFTDNTNNNSNDIIATFISPGKPFTSLAQDMALETEATEALALTTNSASATAALPITTTTPNMSNTNATTNTSLHSLTANINMVNSLLANNVTTRPATSIPDHYSLRWNNHQNHLMRAFDALLQSKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFADTPCKHPVIVLKDFRGWVVQAIIDFMYRGEISVPQEKLHTLIDAGESLQVRGLVESSIPEHTPTPAASPDDFNLIDTSILSSELERCSSFDEESPSMVTAGSKIILPSRLFSSSYRREKEQRKREREKDVIDHALESDHDLINDSVNHNDLCTSPLPRRKQARPRRRSGELTHDLVNSIKVPTPQPINDSSNEQPEDLCKDSKTTDNQECRVTEEPLKTVIKSEMMEAMEDENMDQVGERDSGNDSHEQAEDLIVNDKSIDNLTNNSNNLNLNSSHDLSQEPGVAEQQQEQEQEEQEEEEEEEEEEEDPEEEEDIEQLIHHTNEMNRRRKSALSMQSEGPEDLCTTKKDNDTSGHHSASDNEDTTNNNNNNNSAKLNNNNNRIVLSLKDIRQLNKPSSSSTPNSQNNSLNPFSTASLRDLRLDRERALDTQCKMEVLEAQMQAAAEAAAAAAARGENPFQHMEHQMDLSLAAAAAAAAVSQQHSRERDQALQREQREMQQHNAYANSILGQMGMPGITGPFGPNATAPSCPTGPSAHERLEESMNRLSKEFTPTSPMSLPPHFNPQDGPPHPPSPLPFPGMSSLALTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMPGDAPPFLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLEMLQMGISGSSKNSNESKEQREARKEAQRNAAAAAAAAAAAASQNSSNDLDLVGPMPGAGPRPSSSEPDLLGGPNSLFNPFNPQGFYPDFPGGFPGLPLSMLNLLPPSERQHAAAAAAAMHHSMGLDEDCKSDRSKQSSNMDDEFSLSREERRHTDLLNNSSVPSVSSQQNGSVQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00922026;
90% Identity
iTF_00997842;
80% Identity
iTF_00997842;