Marg022522.1
Basic Information
- Insect
- Metopia argyrocephala
- Gene Symbol
- ttk
- Assembly
- GCA_963576795.1
- Location
- OY756210.1:44370102-44378865[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-19 9.5e-16 58.4 0.0 2 45 564 608 563 608 0.97 2 2 6.5 1.5e+04 -3.1 0.7 3 11 641 649 641 652 0.82
Sequence Information
- Coding Sequence
- ATGTCAGTGCAACAATTTTGTTTACGCTGGAATAACCATCAACCAAACTTTATATCAGTCTGTTCGTCACTACTGCATAATGGCACGTTAGTTGATGTTACGTTAGCAGCAGAGGGGCGACAACTACAGGCGCATAAAATCGTTTTATCAGCTTGTAGTTCATATTTTCAgACGCTATTTACAACCAATCCTTGTCAGCATCCCATTGTTATACTGAAGGATGTTCAATATGACGATCTTAAAACAATGGTTGATTTTATGTATTATGGAGAAGTTAATGTATCGCAAGAACAATTGCCACACATACTAAAGACggctgaaatgcttaaaataaAGGGTCTCGCCGAAATGCCCACCGATCCTGCCAACTTAACTAAATCTGATAATAAATCATCTAATGACGCTACAGAGTTAGTGGGTAATGGTAGTAATAATGGCCAAATAATTGGAAATAATGGTGGTAATGGTGGAGCAGGTGGTGGTGGTAATAGTAGTAGTGGTGGTTTAGGAAGCAGTAGTGGAACGGGTAGTGTCAGTGATTCGATATGGGGTAGTACTGAATCACAATtccagcagcagcagcaacaacttcagcagcaacaacaacaactacaacaacagcaacaacatcaccatcaacagcagcagcaacaattaCATACTCAATTACAAAATAGTCAAACTCAAACTCcccaacagcagcagcaacaacaacagcagcaacatcaTCAGCAACAACTCCGACGTACGCCATCTCCATTAGGAGCTGGTGCTTCACCAGCAACCAGACGAAAACGTTTAAGAAAATCTTCTAATAACGGGTCCGGTGAACGTACAAATTCAGAAGATCATAATACATCTCTAGATGCTACCACAGCAGGAGGCTTAACACTATCCCAAATGAGTCAAATGTCATTTGGTGGTGCAGCCACAAATAGTGCTCTTGGTAGTTTAGCAGCACACTCCCTAcatacagctaaattacttaaAGAAGTCCCTAATAGTGATTTAGAAACAAATCCTCAAGATTCTGATAGTTTGGATGACACCCACGGTCATGTACATATgcaaattaaacctGAAGTGGATATGAGTGGTGTACCGCAGTCAATGCCATTAGATATATCAGGTGCTACAACGCCCTCTGAACACGATGCTCCAAATTCACAATCAGCACATTCAGGTTTACAATGGACGGTTGTTGAACCAAATTATTCACGCTTTTCGCTGTCATCCTGTCCCTCCAATTTAATTGGCAATAACAACAATCAAAATGCAAATaccaataataacaacagctCGAGTAgtgagcaacaacaacagcagcagcatcaACGTCAGCAACAAGAAGCTGTTGCTAgtcaacagcaacagcagcagcaacaacaacatttgCAACAATTACAGCAATATCagcatcaacaaaactcttcaTATTCGCCACAAATTATAACAGTAAGTGGTTATACAAATGCAAcagctgctgctgttgctgcagCACAAAATCTGTCACCGCCTTCGCCCAACGATGGAAATATGGTGCAAACAGTCTACAGCCAAGGACCAACGCCTACTCAATCGCCAGTTGGTAATACATCTGGTTCTGGTGGTGGAAGTAATATGTCAAGTGGCAATGGGGCAGCAAATAATGCCAATATTAAACGTAAACGTTCAGTTAATCCACAAGGTGATGAAAATTTTATACGGGCCCTGGAGGCAGTACGTTCCGGTGGAATAGGTTTCTGTAAGGCAGCCCGATTGTATGGTGTAAATAATCGCACTTTATGGCTCGAATATAAGAAACGTGGTTATCCCGTATCTAGGCCTAGTATAAAGTCAAGAGTAGTAAAACAGGAACCGAATCTCTCACCCTCCCCAACACCACCTGCCAATGCAACAGACGACACAAATGAAAACTATGATCATATGGCTGCGGCAGTAGCCGCAGCACAAACAGCTGCATTAAACATGCAAATACCACCGACTTCCGAAACTCCAACACCATCGTTAATGTGTACATCACATCATACAGGCACTGCCGCTGGTGCTACCACACATCCCACAATGGGCGTGATGAGTTTTTTGGATACCCGCCATATGGACTTCCCAGCCAGCCTGCATTCCATGTCCCGTCAGCGTTATATTGATGCTGGCACTAGCAGTGGTGCCGGAGCGGGTACCATTAATGTTAATCCGGCAACTGCAATGAACTTACAGAGTATTAATTTTAACTCGATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDNKSSNDATELVGNGSNNGQIIGNNGGNGGAGGGGNSSSGGLGSSSGTGSVSDSIWGSTESQFQQQQQQLQQQQQQLQQQQQHHHQQQQQQLHTQLQNSQTQTPQQQQQQQQQQHHQQQLRRTPSPLGAGASPATRRKRLRKSSNNGSGERTNSEDHNTSLDATTAGGLTLSQMSQMSFGGAATNSALGSLAAHSLHTAKLLKEVPNSDLETNPQDSDSLDDTHGHVHMQIKPEVDMSGVPQSMPLDISGATTPSEHDAPNSQSAHSGLQWTVVEPNYSRFSLSSCPSNLIGNNNNQNANTNNNNSSSSEQQQQQQHQRQQQEAVASQQQQQQQQQHLQQLQQYQHQQNSSYSPQIITVSGYTNATAAAVAAAQNLSPPSPNDGNMVQTVYSQGPTPTQSPVGNTSGSGGGSNMSSGNGAANNANIKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKSRVVKQEPNLSPSPTPPANATDDTNENYDHMAAAVAAAQTAALNMQIPPTSETPTPSLMCTSHHTGTAAGATTHPTMGVMSFLDTRHMDFPASLHSMSRQRYIDAGTSSGAGAGTINVNPATAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01397556;
- 90% Identity
- iTF_01236810;
- 80% Identity
- iTF_00997828;