Marg009997.1
Basic Information
- Insect
- Metopia argyrocephala
- Gene Symbol
- retn
- Assembly
- GCA_963576795.1
- Location
- OY756208.1:183281971-183311221[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-26 3.7e-22 79.6 0.0 2 89 30 115 29 115 0.96 2 2 3.7 2.1e+04 -2.9 0.0 44 61 144 161 141 175 0.65
Sequence Information
- Coding Sequence
- ATGGACGAAGACCGCTGCTCTAAAGCATTGATGGCCAAAATGGAAACTGCTATTAATTTGttgtACGAAATCAATGATGATCCCAAACGTAAGGAATTTCTTGATGATCTATTTTCATTTATGCAAAAGAGGGGTTCACCCATTAATCGTCTACCGATTATGGCGAAATCTGTGTTAGATCTGTTTGAACTATATAATTTAGTTATCGCTCGAGGTGGCCTCGTAgatgttataaataaaaagctaTGGCAAGAAATCATCAAGGGGCTACATCTGCCATCTAGTATAACAAGTGCAGCTTTTACACTTCGAACACAATATATGAAGTATTTATACCCATATGAGTGCGAGAAAAAAAATCTCAGTACACCAGCTGAATTACAAGCGGCTATAGATGGTAATCGTCGCGAGGGCCGTCGTTCTAGTTATGGTCAGTATGAGGCGATGCATAACCAAATGCAAATGcctCAAATAGCACGGCAGTCTCTAGCGGGTAGCATGCAACAACTTTCTCCTTTAGCATTGGTTACACATGCGGCTGCTGCCAATAACCAACAGGCTCAAGCTGCAGCTGCTGCTGCAGCGGCTCATCACAGACTAATGACACCTCAAGTTCCTAATTTCGTAACCCAAGAATTAGAACAGCGTATGATTGAATATCTAAAACTAATCCAAGGAAAAACGGAACAGAATGTGATTAGTAACAGTTCGGGTAGTATGGTCTTATCGTCCcaccaacagcaacaacatcaacGACAGAGATCGCCAAGTCCTGAAGTAAGTACAAGAGAAACACTGAATGCATTAGAAATGTCACGGGTCGCACTGTGGCAAATGTATCAAAACCATCAAACTAGTCCACCAACCCCTATAAATATTTCACCAAATGCTGGAGGAAATGCAGGCAAAACAGCCAATAACTGTGGCATTGCTCACGAAACACAACGtaGCGAGGCTTTAAACCTATCGGATTCGCCGCCAAATCTTTCCACAATAAAACGTGAACGAGAACGTGAAACAAGTCCGGAAATAAATGAACGTGGTGAATTTCATCATAATCAACCACCACCAGCTAAACGcaccaatttttatttaccaCCCAGAATGAGTGGTATGAATGTTACAGCGACTGCAACAAACTACAACTACAAGGGTGACCATCACCAACAACACCCTGATATGGAAGGAGATGAAGAAAACCAAGAAGACGGAGAGCACAATACAACAACCAATTCTTCCCCccataatttaaatgaataccAACAATTAAACGGCGAATCATCACTAAGAGTACCTCGACATCATGGCAGCAGTACCAGTGTTCATAACGATAAGTCTGACGATTCGGCTATTGAAAATTCTCCGTCCACCTCGGCTGCATCTGCAGGCAATAGCCACATTTCACCCTTATCCACCAAGAAAATTCATTTATCTAAACAGACCCAGCAGCACAGTACAAAAAGTTCGAGTGGAACTTGTAATGAAATTATAACGGCAAACAATGTGTCACCATCAAGTTCATGCGAAACATTAAATTTGCTGTCTGGAATGCAATTTCTCATAACACGCAACGGTACAAATGCTAAAGGGGAACAAGAGTTAGCGATAAAACTTGAATTAAATGGAATTAAATACTCGGGTATACTTGTTGCtgcaaattcatttaatttatcgCCATCAAAAGCAACTCTGGCACACTCTTCAACCGCTCCAGCAACAAAGTCGACAACACCTATTTCCTTAAACGATGACAGTGACAAAAGTGGTAAGACAGGCAGAGACAGCCCTAACAATGCTACTAGTCCTGTTAGCGACGACAATGAAACAAACAAGGATTTAGTCGTTGTCATGGATACAACAGAAGAAGATACAGATGCCATGACAGTGCGTGATAGTGATACACCACCACCAATTTCAAACTCAAACACTATCATTACAAACGGTACTAACGGCAAACTCAATAACACCCTTATGGGTGATTCAATAACATCATAG
- Protein Sequence
- MDEDRCSKALMAKMETAINLLYEINDDPKRKEFLDDLFSFMQKRGSPINRLPIMAKSVLDLFELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMQMPQIARQSLAGSMQQLSPLALVTHAAAANNQQAQAAAAAAAAHHRLMTPQVPNFVTQELEQRMIEYLKLIQGKTEQNVISNSSGSMVLSSHQQQQHQRQRSPSPEVSTRETLNALEMSRVALWQMYQNHQTSPPTPINISPNAGGNAGKTANNCGIAHETQRSEALNLSDSPPNLSTIKRERERETSPEINERGEFHHNQPPPAKRTNFYLPPRMSGMNVTATATNYNYKGDHHQQHPDMEGDEENQEDGEHNTTTNSSPHNLNEYQQLNGESSLRVPRHHGSSTSVHNDKSDDSAIENSPSTSAASAGNSHISPLSTKKIHLSKQTQQHSTKSSSGTCNEIITANNVSPSSSCETLNLLSGMQFLITRNGTNAKGEQELAIKLELNGIKYSGILVAANSFNLSPSKATLAHSSTAPATKSTTPISLNDDSDKSGKTGRDSPNNATSPVSDDNETNKDLVVVMDTTEEDTDAMTVRDSDTPPPISNSNTIITNGTNGKLNNTLMGDSITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -