Basic Information

Insect: Meteorus colon
Gene Symbol: -
Assembly: GCA_030523125.1
Location: JAPYZG010000052.1:82157-85624[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0092 0.86 10.2 1.0 3 23 127 148 125 148 0.93

2 13 0.0083 0.77 10.3 4.6 2 23 266 288 266 288 0.91

3 13 4.6e-05 0.0043 17.4 1.9 2 23 346 368 345 368 0.95

4 13 5.8 5.4e+02 1.4 7.4 3 23 454 475 453 475 0.86

5 13 0.012 1.2 9.8 0.3 1 23 522 545 522 545 0.95

6 13 0.0038 0.35 11.4 0.5 3 23 590 611 588 611 0.94

7 13 0.0026 0.24 11.9 0.3 3 23 638 659 636 659 0.94

8 13 0.0066 0.62 10.6 3.7 2 23 705 727 704 727 0.96

9 13 0.082 7.6 7.2 4.2 3 23 742 763 740 763 0.92

10 13 0.00013 0.012 16.0 0.2 2 23 808 830 808 830 0.96

11 13 0.038 3.6 8.2 1.6 1 23 908 930 908 930 0.98

12 13 1.5e-05 0.0014 19.0 1.7 2 23 944 966 943 966 0.96

13 13 0.068 6.4 7.4 0.5 1 23 1037 1060 1037 1060 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0092	0.86	10.2	1.0	3	23	127	148	125	148	0.93
2	13	0.0083	0.77	10.3	4.6	2	23	266	288	266	288	0.91
3	13	4.6e-05	0.0043	17.4	1.9	2	23	346	368	345	368	0.95
4	13	5.8	5.4e+02	1.4	7.4	3	23	454	475	453	475	0.86
5	13	0.012	1.2	9.8	0.3	1	23	522	545	522	545	0.95
6	13	0.0038	0.35	11.4	0.5	3	23	590	611	588	611	0.94
7	13	0.0026	0.24	11.9	0.3	3	23	638	659	636	659	0.94
8	13	0.0066	0.62	10.6	3.7	2	23	705	727	704	727	0.96
9	13	0.082	7.6	7.2	4.2	3	23	742	763	740	763	0.92
10	13	0.00013	0.012	16.0	0.2	2	23	808	830	808	830	0.96
11	13	0.038	3.6	8.2	1.6	1	23	908	930	908	930	0.98
12	13	1.5e-05	0.0014	19.0	1.7	2	23	944	966	943	966	0.96
13	13	0.068	6.4	7.4	0.5	1	23	1037	1060	1037	1060	0.97

Sequence Information

Coding Sequence: atggcaTCGACAGTGGCCCAGGAAACGATGTTGGTGCCACAGTCAAGTGAATTGGACAGCGAATGTTCAAGCGGTGGTGATGAAGGACACGATGTGCGCAAACGAGCGCGAGATGACGCAGATGCTAGTAGCCCGAAGAAACGTAGAAAACAAACAACACCAGTCCGTTTTCCAACGTCACTACTGACGACGGGTGAACGTGACGAATTCGAAGAAGaggacgacgacgacgatgatgatgatgagggtGCACACGAAGCGGACGAGACGAATGATAATATCACAAGATTTGCTGATGACGTGAAGGAGAAAGGTAAGACATTACTACGAGATTCAGCAGAGTCGACGAGAGACGAAAATTTAAACATGGATTTTGGCTGTCAATTTTGTGGCCGTTTATACGACAATAAAGACTCATTGGCGCGTCATTTAGATCACGAGCATGGCgcgaataatcaattgataaatcttAGTTCAATGTCAAATTCTCGAGTGCGCGTGAAACTTGAACAACAAGAAGAACCTGAAAATCCGGTTAATCTATCGGGCCTTGGggtaaaaaattttgcaactTCTTGGTTGTCTGGTCATTCACAAGTGCAATTACAAGCTCAAGAATCTGAATGGTCAAATCAACATGCTGTGACATCATTAACTAGTCACTTACCCGGTATTCCATTTCCTGGTGCACTTGCCCAATACCTTCCCTTGCCAGCATTCTCGCTTGGAGATTCGGGTCCAATGGCACGGGTACCCGTTGGCCCGGCGCCCATTCGAATTTTTAATCCTGACGCCTACTGCGATCTCTGTAATAAAGAATTTTGCAATAAGTACTTCCTCAAAACGCACAAAGCCAATAAACATGGTATTTACGTCGATGCACCGTCAATGCAAACTGGCATCAATGACAGCAATGGATCGAATTACCCAAATATACCTTTTCCATCTGGTAATATCATTGTAGAGCACCACTCGCAGCAACAAGCAAGATTAGAAGTGCCTACACCAACCTCAGGTCCTCATACTCCAACTGTTTCTTGTGACATTTGTCAAAAACGTTTCAAGAATGAAGATTCATTTcgaaaacacaaacaaaaagtTCATATTGAACTGTCAGACCAGGCTGACTCACAATCATTACCAGCAACTGTTCttggtgatgatgatagaGAAGTGTCAAGAAGCAGTCCCAGCACAATGGAATCTTTATTCAAGCAAGACTATGGAATTGAACAGGAAGAAACTAAATTCATGCCAGCACCAAGACACCTATCACCGCAATCTAGTCAACAGGCTCGTGAGTCTGGTTTCAATATTGATAGGCTTCGCCGACTTGGTGTTATAAATCCTGATGCATTCTGTGAGATTTGCTGTAAGGAATATTGTAATAAGTACTTCCTTCGAACGCATAAATTGAAACGACATGGAATTGTTATTCAAGATAATGATAAGTCACCCAATAGTTCAGGAACTGGTGCTACATGGCATCAAATTCAAACGAGCccattaaatttaatagtCACAGAAAATGCAGCTAGTTCAGAATCTAATGACAATGAAGAGTTTGAATGTAAACCTTGTGGACTTCGATTTCAAACGAATGGACTTTTTCAAGCACACACAGCGAAAATGCATGAGAATGAAGAACCAAAATCACCAAAACAAGAAGTTGATGAAGAGCGGGCTGATTCTATCTCTGAAGATCTtcaaaaattacaaacaatGATTTTACAATTGAACGGATTGAATTCCACAAAGACGTCCATTTGTGCAATTTGTGGACGCGAGTGCGAAAATAAATTAGCTTTGAAGACGCACATGAGTTTGGAACATGGCACGAATATTTCCGAAGAAGCTTCGTCACCCACTCAAGCCATGGAATATCCTCTGAACGCTGCTCAATCAACTTTTTGCACACTTTGTGAAAAAGATTATCAAAATCAAGATGCATTGAGACAACACATCAATGATGAGCATCAACAAACTGCTGCGGTTTCAAATAATCCACCCAACATTATCCATGTTATATCTCCACCATCAGTACCACCACCTGCACCACCTATTCCACCACCCcctgataaaaaaatcagtTCAATGACGCCCACATCGAGTTACTGTGAAATATGCAATAAAGAATTGTGCAACAAATACTTTATGAAAACACATATGCAAAAAATGCAcggaattgaaattgaaaatggctCACAAATTGGTGGAGTAATTTGCAACATTTGTAACAAAGAGTTAtgcagtaaatattttttgcgaGTACACAAACACAATACACATGGAATTGTTGACGAAGGAACGGCAACAACTAACAAATCGGACAGCTTCGATTCATCTAACCCAGATGATGTTGGATTAAAACCTGAACAGTTAGGTGATTTAAGTCATCGATATTTTACACACTTTACTGAAGTTTGTCCTATCTGTAGTCGGAGATTTAGAAGCATAAAATGGTTAAAGGCGCATTTATTAAGCGATCATGCCAAAGTTGGAGTAGAAAAGTGGCGTGAACTAGAGCAACAGTTTCAAAATACATCCAAAAGTCGATCCAGCAGTACTTCTAGTCGTTCAAGTCAACAGAAtcttaatttaaaaattcccAATGGTCTAGAAACAACTCAACCACCATCAAAAACTGGTGATTATTCAGGTCTTGGAAATCAAGTGCTTTCTACTTTATTTGGTGGAACAGAAGAGCAACAAGCAAAGAATTATCGATGTTCTTATTGCAACTTCACCACCACAGTAttgccatttttattcttacatGAAAGATCGCACACAAATAATCCAGAGAGTATGAACTTAGAGAGTTCCCTACAGTGTCCCATCTGTTCGCAAACCTTTTCACAACCAGAACTGCTGCATCATCATCTATTAACGAGTCACCAATTCTCAGGTTTACTTTCGCAATTTCAATCACCTGTTATTAATCCACCATCAGAGGGAAATCACGAGCGTGTTGAGTTGCCCGAACAAAAAGAGTCAGAGTACAAAGATGAACAGCGACAATCAAGTCCGACAATTCAAGGAAATTTAGACAACAATAAAAGTAAACGAGACGAACCTGCAGCTGTTCAGGTGACGCCACAAGGCGCTTACAAGTGTGCCCAATGTGGCTTTGCTACTGCcaatttgaatagaataaagaaaCATGTGAAAAAGGATCATAAAGCCCTCGGCGATCCGACGGATTGCGTTATCGATGAACTTAGTAAGACTTTGCGAGATGTAGCGAATAAGCATAAAGTACCTGCAAGCTACGCAATGCCTCAAGACATGAATTCTAATCCAGATGCTACCGTGATGCAGCCGTTCATTATTGAAGAACAAGATAGTGGTGTTAGTGGTGATGAATTTGGGATTGAGCGAAGATTTGCGCCGGCTCTAGTCTATCTCCCAGTACGTGCGCGTATCACCAGTGTACTTTCGGCTTCCTTTACACTCAGTCCTGCCtaa
Protein Sequence: MASTVAQETMLVPQSSELDSECSSGGDEGHDVRKRARDDADASSPKKRRKQTTPVRFPTSLLTTGERDEFEEEDDDDDDDDEGAHEADETNDNITRFADDVKEKGKTLLRDSAESTRDENLNMDFGCQFCGRLYDNKDSLARHLDHEHGANNQLINLSSMSNSRVRVKLEQQEEPENPVNLSGLGVKNFATSWLSGHSQVQLQAQESEWSNQHAVTSLTSHLPGIPFPGALAQYLPLPAFSLGDSGPMARVPVGPAPIRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDAPSMQTGINDSNGSNYPNIPFPSGNIIVEHHSQQQARLEVPTPTSGPHTPTVSCDICQKRFKNEDSFRKHKQKVHIELSDQADSQSLPATVLGDDDREVSRSSPSTMESLFKQDYGIEQEETKFMPAPRHLSPQSSQQARESGFNIDRLRRLGVINPDAFCEICCKEYCNKYFLRTHKLKRHGIVIQDNDKSPNSSGTGATWHQIQTSPLNLIVTENAASSESNDNEEFECKPCGLRFQTNGLFQAHTAKMHENEEPKSPKQEVDEERADSISEDLQKLQTMILQLNGLNSTKTSICAICGRECENKLALKTHMSLEHGTNISEEASSPTQAMEYPLNAAQSTFCTLCEKDYQNQDALRQHINDEHQQTAAVSNNPPNIIHVISPPSVPPPAPPIPPPPDKKISSMTPTSSYCEICNKELCNKYFMKTHMQKMHGIEIENGSQIGGVICNICNKELCSKYFLRVHKHNTHGIVDEGTATTNKSDSFDSSNPDDVGLKPEQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLLSDHAKVGVEKWRELEQQFQNTSKSRSSSTSSRSSQQNLNLKIPNGLETTQPPSKTGDYSGLGNQVLSTLFGGTEEQQAKNYRCSYCNFTTTVLPFLFLHERSHTNNPESMNLESSLQCPICSQTFSQPELLHHHLLTSHQFSGLLSQFQSPVINPPSEGNHERVELPEQKESEYKDEQRQSSPTIQGNLDNNKSKRDEPAAVQVTPQGAYKCAQCGFATANLNRIKKHVKKDHKALGDPTDCVIDELSKTLRDVANKHKVPASYAMPQDMNSNPDATVMQPFIIEEQDSGVSGDEFGIERRFAPALVYLPVRARITSVLSASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00996599;
90% Identity: iTF_00996599;
80% Identity: -