Basic Information

Insect: Meteorus colon
Gene Symbol: -
Assembly: GCA_030523125.1
Location: JAPYZG010003370.1:1-3268[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 7.9 7.3e+02 0.9 0.3 2 19 360 377 359 378 0.80

2 10 6.4 6e+02 1.2 1.6 1 23 387 410 387 410 0.95

3 10 0.00015 0.014 15.8 0.0 1 23 416 438 416 438 0.98

4 10 0.33 31 5.3 2.9 1 23 444 466 444 466 0.97

5 10 0.00012 0.011 16.1 0.7 2 23 473 494 472 494 0.97

6 10 0.00041 0.038 14.4 1.9 2 23 501 523 500 523 0.93

7 10 7.5e-06 0.0007 19.9 2.2 1 23 527 549 527 549 0.98

8 10 0.0053 0.49 10.9 1.7 1 23 554 576 554 576 0.98

9 10 1.5e-06 0.00014 22.1 0.2 1 23 582 604 582 604 0.97

10 10 0.00042 0.039 14.4 1.7 1 22 609 630 609 630 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	7.9	7.3e+02	0.9	0.3	2	19	360	377	359	378	0.80
2	10	6.4	6e+02	1.2	1.6	1	23	387	410	387	410	0.95
3	10	0.00015	0.014	15.8	0.0	1	23	416	438	416	438	0.98
4	10	0.33	31	5.3	2.9	1	23	444	466	444	466	0.97
5	10	0.00012	0.011	16.1	0.7	2	23	473	494	472	494	0.97
6	10	0.00041	0.038	14.4	1.9	2	23	501	523	500	523	0.93
7	10	7.5e-06	0.0007	19.9	2.2	1	23	527	549	527	549	0.98
8	10	0.0053	0.49	10.9	1.7	1	23	554	576	554	576	0.98
9	10	1.5e-06	0.00014	22.1	0.2	1	23	582	604	582	604	0.97
10	10	0.00042	0.039	14.4	1.7	1	22	609	630	609	630	0.95

Sequence Information

Coding Sequence: ATAAAAGAGGATGATGGTTTGTCACAAATTATTTGTGGGCGATGCCTGGGAACTTTGGAGTTTGTCTGTGACTTTCACAAACAGTGTCACGATACCCAACGGAATTTACAAGAAAAgGTGATATCAGCTGGCGCTGCTGAAACGGAAGAAGCATTAAAGTCTTCGGAACCCGACGCTGAATCCGATAAAGAAAATGCTACTCCTCCACAAATACTACGCTCTTCCACGACTTCTAAAAAGAAATCACCAAAACGTTCTAGTGTTCCCGAATCTTCGAGTGAGATAGCAGTTGTTGATGGAGAAGCGCATCGAACTGTCATTACTCGTGAAAATGTTTTGGCTGACATTACACAAGATTATCGTGAATCGTCGAAACCTACTGCTGCCAAAAAACTTTTCCTTAATTCTAATGGAGCCAAAAGAAAACGAGAGACCCCAGCACGTAGAGCGAAAAAAAGTGGCAAGGAATCTATACTTGAAAATTCTAGATGCAAACAAaggaaatcaaaaaattctataaagaTCTTAGAAAGTGAAAAGCAAACTATATTAACGGTCAAAAGTAAATCCGCGCCTGATATTGTGAAACAGGAGAAAGATAGCGATAAAGAGGGTGTTGTTTTTACTCAACAGAAGAACTCGATAAAGCTGAATGAATGTATAGGGATTTCGAATACAATCTTGCCGAAAGTAGAAACACCAAGgtcaaatttgaatgataaaccTCAAGACAATGTAACGCATGCAACAGGTGATGAGGCTGAGATTCCGTCTACAACTTCGTCCAACACGattgtattgaaaatgttgacGAGTGTAACACCTGGGACTGACAATAAACGGCGCAGATGTGTAACCAAGAAAACACAGAAAGTCATTGAATCCGTAGAAATTATTCCCGTTGGAAGCAAGTCTTCTGTCAATAAACGGCGTAAAAGCGAGACGTTTGGTAAAATATCCGAATTAATAAGTGCAGAACAAAAggaaactattgaaaaatattacacaatAGATATGTCAGTTATTGATGAAGGTATTGTCAGGAAGAGTTACACTTTCAACGATAGCAAAAAAGTTGTTTGTAATTTGTGTAAGGCTACATACCCACGAGTTGATAAATGTCAAGTCCACATATGGGGACATTTGGACATGAAGCCGTATCGTTGCAATGCATGCGAGTTTGCGACTGTTACTGTGACGAATATACGATGCCATATAAGAAAAAGTCATCTGAAAATAAAACCATTTGAATGTAATATATGTGCAAAACGATTCGTTGCTGCATCACTATTGGAAGAACATGCTAATACTCATACAGGTGCGAGGCCATTTCAATGCGAAACTTGCGGTTTCTCAAGTCATAGTCGCCAAGTACTCGTCTATCACAACAAAACACATAGAGGAGTAAAGgatGTCACGTGCGATACTTGCAAAcgacaattttattccaaaggACGCCTACGTGCTCATATGTTGATCCACAATAAAGATAAAACTCTTATGTGTAAATACTGTTCTCAACATTTCACTACCATTGAATCATTGCAACGACattatgaaaatgttcattcaacTGATTATGTTTGCACAATATGTGGCAAGCGTACGAAGTCACGGAAAGCGCTACACAATCATCAAAAcGTACACTCGGAGGCTAAATTCAAATGTCAGATATGTCCTAATGTTTATAAGAGCAGTCACATATTGAAAGAGCATTTACTCAAGCATGAAGGTattcgtaaatatatatgtgatgttTGTAACAAAGCATTTGCACAACAGTCACATCTCGCTGCACATAAAGCCGTTCACAGTGATAAAAGATTCTTCTGTCCTGGATGTCGAAGACCATTCAATCGTCATGACAACATGAAAATGCACACGAGACGTTGTGATCTATTTCAAGCTAATGAAGAATTGCAGAATATTGACGTCAAACATTcgaaatcaaaaacaaaagcaATGGCAATTGAAGAGATAAACGATAATGGAGCGCGAATTAATGATACAGGAGACAAGAAATTAGATGAGACTGATGTCGTTCCTAGCCAGAAAGAAAATGGAGGTTCTGAAATGAATGAGGTGAGTGTGACGCCAATATCTGGCGCGGTTGAGCCTGAAAATCCACGTGCCAGTGGTGCTGTTACCGTTACCGAAAGTATTATTAAACTTGAAAATTTCtga
Protein Sequence: IKEDDGLSQIICGRCLGTLEFVCDFHKQCHDTQRNLQEKVISAGAAETEEALKSSEPDAESDKENATPPQILRSSTTSKKKSPKRSSVPESSSEIAVVDGEAHRTVITRENVLADITQDYRESSKPTAAKKLFLNSNGAKRKRETPARRAKKSGKESILENSRCKQRKSKNSIKILESEKQTILTVKSKSAPDIVKQEKDSDKEGVVFTQQKNSIKLNECIGISNTILPKVETPRSNLNDKPQDNVTHATGDEAEIPSTTSSNTIVLKMLTSVTPGTDNKRRRCVTKKTQKVIESVEIIPVGSKSSVNKRRKSETFGKISELISAEQKETIEKYYTIDMSVIDEGIVRKSYTFNDSKKVVCNLCKATYPRVDKCQVHIWGHLDMKPYRCNACEFATVTVTNIRCHIRKSHLKIKPFECNICAKRFVAASLLEEHANTHTGARPFQCETCGFSSHSRQVLVYHNKTHRGVKDVTCDTCKRQFYSKGRLRAHMLIHNKDKTLMCKYCSQHFTTIESLQRHYENVHSTDYVCTICGKRTKSRKALHNHQNVHSEAKFKCQICPNVYKSSHILKEHLLKHEGIRKYICDVCNKAFAQQSHLAAHKAVHSDKRFFCPGCRRPFNRHDNMKMHTRRCDLFQANEELQNIDVKHSKSKTKAMAIEEINDNGARINDTGDKKLDETDVVPSQKENGGSEMNEVSVTPISGAVEPENPRASGAVTVTESIIKLENF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -