Basic Information

Insect: Meteorus colon
Gene Symbol: -
Assembly: GCA_030523125.1
Location: JAPYZG010001887.1:9268-12692[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.5e-06 0.00051 20.3 1.3 1 23 151 173 151 173 0.98

2 15 0.00059 0.055 13.9 1.6 3 23 181 201 180 201 0.99

3 15 0.00011 0.01 16.2 0.1 1 23 329 351 329 351 0.98

4 15 0.19 18 6.0 0.1 1 23 357 380 357 380 0.97

5 15 9.4e-05 0.0088 16.4 1.9 1 23 407 429 407 429 0.97

6 15 1.4 1.3e+02 3.3 0.0 1 23 445 467 445 467 0.86

7 15 0.29 27 5.5 0.2 2 23 474 496 474 496 0.94

8 15 0.0032 0.3 11.6 3.0 2 19 504 521 504 525 0.95

9 15 0.0071 0.66 10.5 3.5 5 23 535 553 533 553 0.94

10 15 0.018 1.7 9.2 0.1 3 23 560 580 559 580 0.97

11 15 6.7e-06 0.00062 20.0 0.4 1 23 589 611 589 611 0.98

12 15 0.0029 0.27 11.7 0.2 3 23 619 639 617 639 0.97

13 15 0.0026 0.24 11.9 0.2 3 23 647 667 645 668 0.94

14 15 0.088 8.2 7.1 0.0 1 23 682 704 682 704 0.92

15 15 0.0068 0.63 10.6 0.0 1 20 1088 1107 1088 1110 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.5e-06	0.00051	20.3	1.3	1	23	151	173	151	173	0.98
2	15	0.00059	0.055	13.9	1.6	3	23	181	201	180	201	0.99
3	15	0.00011	0.01	16.2	0.1	1	23	329	351	329	351	0.98
4	15	0.19	18	6.0	0.1	1	23	357	380	357	380	0.97
5	15	9.4e-05	0.0088	16.4	1.9	1	23	407	429	407	429	0.97
6	15	1.4	1.3e+02	3.3	0.0	1	23	445	467	445	467	0.86
7	15	0.29	27	5.5	0.2	2	23	474	496	474	496	0.94
8	15	0.0032	0.3	11.6	3.0	2	19	504	521	504	525	0.95
9	15	0.0071	0.66	10.5	3.5	5	23	535	553	533	553	0.94
10	15	0.018	1.7	9.2	0.1	3	23	560	580	559	580	0.97
11	15	6.7e-06	0.00062	20.0	0.4	1	23	589	611	589	611	0.98
12	15	0.0029	0.27	11.7	0.2	3	23	619	639	617	639	0.97
13	15	0.0026	0.24	11.9	0.2	3	23	647	667	645	668	0.94
14	15	0.088	8.2	7.1	0.0	1	23	682	704	682	704	0.92
15	15	0.0068	0.63	10.6	0.0	1	20	1088	1107	1088	1110	0.94

Sequence Information

Coding Sequence: ATGGATGTATCTGATGACCTGGCGTTACAATGGGTGGAAGAAGTGGGAAATGTCATCCATGAAGAGGTGATATGTGATCTAGAAGCTGATCTTGAAACTCAAGATGATGAAGTTGTTGGTGCTTGTGAGGAAGTATCCATAGAAGGAACAGTCGAATCGGCACccgaaaataatttgtcgACACGAACTTTACCTCCTGACACAGAAATACTAATGGTACCGCAGTCAAATGATATGGAATCTATATATATCGTACCACAAGATCAGGGGCatgattatttaaatattcaagttACGGAAGAGGTGATTACAGACAATTGGGATCGATCCGGTCCAGACGATGgGGTGGATATTCCTGAAACGAAAGTTTCACATGATAATCTATTAGAGTACGATGATATGGAAATTCCGTTACCAATTGATCAAGATTCATATACAAGTACGCGGCCTTATCCTTGTGATTTTTGTAGTCGGCGGTTTCGCAAAAAAGCAAATCTTATGAATCATATGGTAACTCATCAGACTGATCGCCCGCACGGTTGCAATCTCTGTGGCGCACGTTATGTTCGCAAGTGTGATTTAATGAGTCATCTTAAGACCCATGCATATGCACCATCGCGCGATGGTTTagaagatgaattgaatgatgacGATTCTCTTATACCCGATGAAGAAGAGACAACGAAGGGTCGTCGTAAAAAAGTACAATCATCAGTACCgaggaaacgaaaaaataatgttggtGGAGGTGATGATGTGGTGAAGCGTAATGCTGTCGATAATCAATTATCGAAATTGGAAAGCAGCAAATACGTAGGCAAATCGTACGATTATGTTGATGAAGATATGCGTTTATTGGAGGAAATGACAAGGGGACCCGGCTCTAGAAATGTTAATTTAGCGTCCAGTTCCAGATGGACTGAATCGATCATGGCAACTGTTTCTCAGCCACCAAGATGGCCCATCACTGATCCCACAAAACCGTATGTATGTCAATATTGTGGAGTTGGATTCGCTCGTGAAAAAGCTTTAGCGTCACATTCCCGCATTCATGGCGGCGACAGTCCCTTCGAATGTGCCAACTGTCGTGAGATGTTTTGGGACGTGAATGCCCTCAAAGAGCACGTACGAATAAAGCATGGAGTGGCGACCAATAATGATGAGCATGACGCAACTACTAATGAAACATCTTACACGGGAGATGAAAGATTCggcgaatttttttgtgaaacaTGTGGTATACCATTCCACCGATTGGATCTTCTTAAGCGTCATCgtaaaattcacataaaacaaGAGGCAGTTGAGACGTTGGACGGTTCAAGTCAACATCACGTTTGTAACGTTTGTGGCGAATGGTTTGAAGAAGCGCTAGCACTACTGGCTCATGCTGAGCTTCACGCTCGCTCACCAAATCGTAGGTGTCTGTTATGTGGGGAAGTTTGCCGTGACGATGCCGAAGTTGCTGAACATGTTCGTCAAAACCATGCTGACGATGCACCACCTAATACTTGTACATTATGTGGCAAAACATGTAAGGACAAACGGAGTTTATTAAAGCATTCATGGGTCCataatgttgataaaacaTTTGGATGTATCAAGTGTGGCAAGCGTTTTCATAGCAAAGCCCGTCTTCGTCGTCATATGGTGTCGCATCGCAATAAAATGGTTGCCTGTGACGAATGCGGTATGGAATTTCCTGATGGACGTGCGCTTGTCAGTCATCGTCATTCGCATAATAAAGATCTGGGAGGGAGGTCTTTTCCATGTCGCGAATGCGGTAAAACGTTCGGTAGTCGTAGTTctcaacaaattcatatacGCATTCATACTGGCGAGAGACCATACGGCTGTCGATTTTGTTGGAAAGCTTTTGCTGACGGTGGGACTCTACGAAAACACGAGAGAATTCATACTGGTGAAAAACCTTATGGATGTGCCATTTGTCCACGTGCATTCAATCAACGAGTTGTTCTTAGAGAACATGTTCGGGCTCATCATTCCGGCCCTGATCCAAAATGTCATGGTAGCTTGACACCGTATCTATGCAAAGTTTGTGGGGACTCCTTTGCATCTTCAGAAGAAATCGTTCTCCATATTGTGCAACATTGTGATGACAATACAGCGTTACGGAGACAACCACAAGTTGGACCGAGAAAATACAAACGAAGACGCAAACTCAAATCCCATGAGACGCCAGTACCAAGTGTTGGAACACgatccaatgaaaattataatatgatgGAGTCTGTAGGATCTGACTCCGATGACAACACTAAAAGAAAACtgggaaggaaaaataaacaacaacgCTCCAATGTCGATGAGGGATAtcaaaatgtattgaaaagtTTTGAAAGTTCCatgcaaaatattaattcaatcgTTAATAATTCCAAGTCATCGACTCCAACAAAATCGAAATTGTTAAAGAAGAAGGCGaagaaagatgagaaaaagatGACGGAAACCCAGTCTCAGACGCAGCATGGACGACCAAAAATGATTCATACACAAAAAACTCGTGTACCTGTCGAACTGGGAAGTGATAGAGTGAAAAAAGGCCAGAAGACAAAGACCTTGGTCACAAGAACACCAAAAGTAATTCCGAACGAACATAAACAAGGATTTTTCCCTGGTGGCGAAAGAAATCGTCCAAGAACCAAAAATGTAAGTTATCATGTCGAGGGTAAATTACAGATGACACCCGCAACATTCCCGAAACCAAAGGAGTTGGAGAGTATTCGAACAACTCAGCCTTTTAGCCAGATTGATATCAAAGAGGAGTCGAACGCAACGAGAAAGCTCGtcaaagaatcaatgaatcaTGGAAATAACAATGGGTCGATCGAAAATGTTATTTCTAAGCCTGAATCgccaatgaaaagaaaatctcTGCGAGGCAAAGCTACGAAGAGAATGACAAGACAAATGACCATAAAGCAGGAGCCACATGATGATCGAGTAGACGAGGATAACGTACaggataataataacattgtaTCCTCTGTGACATTGGATAGGTCGGAGGATCAAGGCAACGATATGGCGGTCGGCTTTGAAACCAATATAACTGCCCAGGGAATCGATGAACAAGAAACTATATTACCCGACCTGGACAATGTCAATCACACCGAAGAAGTGAGTAACAATAGAGTCAAATTGAGCGTCAAAGTTGAATCTACATCAGATCATCAGCATTTGATACAGAGTGTGACTGAGGATGTTCCCGAAACCATCATACCCGACGCCATTGAGTATACATGTGAGATGTGTTCTGCGGTGTTTGCGAGTCGTGCTGAGCTTCTTATTCACGTACCAATACACATCTGA
Protein Sequence: MDVSDDLALQWVEEVGNVIHEEVICDLEADLETQDDEVVGACEEVSIEGTVESAPENNLSTRTLPPDTEILMVPQSNDMESIYIVPQDQGHDYLNIQVTEEVITDNWDRSGPDDGVDIPETKVSHDNLLEYDDMEIPLPIDQDSYTSTRPYPCDFCSRRFRKKANLMNHMVTHQTDRPHGCNLCGARYVRKCDLMSHLKTHAYAPSRDGLEDELNDDDSLIPDEEETTKGRRKKVQSSVPRKRKNNVGGGDDVVKRNAVDNQLSKLESSKYVGKSYDYVDEDMRLLEEMTRGPGSRNVNLASSSRWTESIMATVSQPPRWPITDPTKPYVCQYCGVGFAREKALASHSRIHGGDSPFECANCREMFWDVNALKEHVRIKHGVATNNDEHDATTNETSYTGDERFGEFFCETCGIPFHRLDLLKRHRKIHIKQEAVETLDGSSQHHVCNVCGEWFEEALALLAHAELHARSPNRRCLLCGEVCRDDAEVAEHVRQNHADDAPPNTCTLCGKTCKDKRSLLKHSWVHNVDKTFGCIKCGKRFHSKARLRRHMVSHRNKMVACDECGMEFPDGRALVSHRHSHNKDLGGRSFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYGCAICPRAFNQRVVLREHVRAHHSGPDPKCHGSLTPYLCKVCGDSFASSEEIVLHIVQHCDDNTALRRQPQVGPRKYKRRRKLKSHETPVPSVGTRSNENYNMMESVGSDSDDNTKRKLGRKNKQQRSNVDEGYQNVLKSFESSMQNINSIVNNSKSSTPTKSKLLKKKAKKDEKKMTETQSQTQHGRPKMIHTQKTRVPVELGSDRVKKGQKTKTLVTRTPKVIPNEHKQGFFPGGERNRPRTKNVSYHVEGKLQMTPATFPKPKELESIRTTQPFSQIDIKEESNATRKLVKESMNHGNNNGSIENVISKPESPMKRKSLRGKATKRMTRQMTIKQEPHDDRVDEDNVQDNNNIVSSVTLDRSEDQGNDMAVGFETNITAQGIDEQETILPDLDNVNHTEEVSNNRVKLSVKVESTSDHQHLIQSVTEDVPETIIPDAIEYTCEMCSAVFASRAELLIHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00996542;
90% Identity: iTF_00996542;
80% Identity: -