Basic Information

Insect: Meteorus colon
Gene Symbol: -
Assembly: GCA_030523125.1
Location: JAPYZG010000143.1:34192-37605[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.19 17 6.0 1.7 1 23 302 324 302 324 0.88

2 13 5.3e-06 0.0005 20.4 1.4 1 23 329 353 329 353 0.94

3 13 0.00015 0.014 15.8 1.9 1 23 419 441 419 441 0.98

4 13 1.3e-06 0.00012 22.3 0.3 1 23 447 469 447 469 0.98

5 13 0.0058 0.54 10.8 0.1 1 23 478 501 478 501 0.88

6 13 2e-07 1.8e-05 24.9 3.6 1 23 507 529 507 529 0.98

7 13 5.8e-06 0.00054 20.2 1.3 1 23 535 557 535 557 0.98

8 13 0.0001 0.0095 16.3 3.4 1 23 563 585 563 585 0.97

9 13 5.5e-09 5.1e-07 29.8 0.6 1 23 591 613 591 613 0.99

10 13 4.5e-06 0.00042 20.6 5.1 1 23 619 641 619 641 0.98

11 13 9.4 8.7e+02 0.7 5.3 2 23 648 669 647 669 0.95

12 13 5.2e-06 0.00048 20.4 2.4 1 23 675 697 675 697 0.98

13 13 1.1e-07 1.1e-05 25.6 1.5 1 23 703 725 703 725 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.19	17	6.0	1.7	1	23	302	324	302	324	0.88
2	13	5.3e-06	0.0005	20.4	1.4	1	23	329	353	329	353	0.94
3	13	0.00015	0.014	15.8	1.9	1	23	419	441	419	441	0.98
4	13	1.3e-06	0.00012	22.3	0.3	1	23	447	469	447	469	0.98
5	13	0.0058	0.54	10.8	0.1	1	23	478	501	478	501	0.88
6	13	2e-07	1.8e-05	24.9	3.6	1	23	507	529	507	529	0.98
7	13	5.8e-06	0.00054	20.2	1.3	1	23	535	557	535	557	0.98
8	13	0.0001	0.0095	16.3	3.4	1	23	563	585	563	585	0.97
9	13	5.5e-09	5.1e-07	29.8	0.6	1	23	591	613	591	613	0.99
10	13	4.5e-06	0.00042	20.6	5.1	1	23	619	641	619	641	0.98
11	13	9.4	8.7e+02	0.7	5.3	2	23	648	669	647	669	0.95
12	13	5.2e-06	0.00048	20.4	2.4	1	23	675	697	675	697	0.98
13	13	1.1e-07	1.1e-05	25.6	1.5	1	23	703	725	703	725	0.98

Sequence Information

Coding Sequence: ATGGCGGAGGTATCACTTTATGATTCGACTATTTGTCGTTTATGTGCCgaggataataataatggagaaTTGTTATATGGTGGAGGCGATGAAGAGCCAGATTTAAGCACAATGGTCAATCGCTACTTGCCACTCAAGataagaaatgatggaaaattacCCCGAACAATTTGTCCTGGTTGTAACATTCAGCTGGAGGCAACAATACAATTCTTTGATTTGTTGGTCGACGGACAACGAAGAATTCGCCAATTGTGGAAACAACAGCAAGAGCAACAACGAAAAGCCGATCGGGAACGTCTTCGAGCGGAGAGAGAAAATACAGAATTGTCGATTGAAACACCGGAGCTCGATGGTTATGAACAACAAGATCCTGAAGATAGATATGAGCAACAGATCATAATCAAGatTATGCCCGATGGATCCATGTACGCAACTGAACATGACATGAGTTTACAAATGGAAGGTTTGGCCAAACCAAGACGAAAACGTGGTCGGCCACCAAAAGTTCATGCTGAAGGCGGTACCAAGGAAGCCGAAGAGGTGGTTCATGATGGTGGTAGTCAAGGTGAAGATGATAAACAAgacgatgaagatgaaattgacGGAGATGGGAGACGCCGACGAAAACGGAAAGTTCCTAAAAGATTCTCTGAAGCTGTTCAGGGGAAAGAATTGGAACGAATATTCAAAGAAGAAGGTGTAATAGACgacgaagaagatgaagaagtcGATCGTGATTATGATGATACCGAGGAACAATTGAATGTCCCGGTTACTGATGCAAACGCGGAAGTAATTGGACACTTGGAAactgaggaaggaaaggacCTAGGAGAATTGGTCATTGTTAATCGAGGTAGGGGCCGCGGCAGACCGAAATTACGTCGAAAGAAAACCAGATTCACATGCAATTTATGTGGTCGCGGGTTTTTACAACGTAGTCGGTACATTATGCACAAAACTTTTCATAAAAGTGTTAGATATGAATGCTCAGAGTGTAATAAACGATTTACgaatattgacaattttacACTACATCAAAAAACTACTGGTCATGTTGGTGAAGAGATTATTAAGGCGCTTCCCGAGAAGAGTTCATTGCAAGAAGacataagaaaaataagagatgATGGTTCGCCCATGTTGTCAGAGGGACCTCCTGAAAAGTTGGAAAACTccgaaatgaaaattgatgagcaGTGGCATATAGAATTATCGCAGAATGCAAAGCCGATAAAGAGTGTTTATACTTTTAGTTGCGATGAATGTGATGAGAAATTTGATACGAAAGATGATTGCCAAATGCATATGAGAATACATGAACCTGAAAAGCTATTTCCATGTAGTGTTTGTGATAGAACATTCCCTTATCAATCCACATTGGAGAGTCATTTATTGACGCATGAtacatcaaaaattgaaaaaggatTTGCTTGTGATATTTGTGGCAAAGTATTAAACCATCCTAGTTCAGTTGTTTATCATAAAGAAGCGGAGCATAATAATGGCCGTAGGTTTGTTTGCAACAAATGTGGGAAAAGTTTTAAACACAAACAATTGTTGCAGCGCCATCAGCTCGTTCATTCTGATGATAGACCGTACGTATGTAAATCTTGTAATTCGAGTTTTAAAACCAAAGCAAACTTGATTAATCATCAGTTAACGCATACTGGCGAGAAAAAATATGCGTGTGAGAAATGTGGCCAACAATTCGCACATAAAACAAGCCTGACATTACACCATCGTTGGCACAATGGTCATAAACCGTACACCTGCGAAGTTTGTAATAAAAGTTTTTCGCAGAATGGAAATCTTCAGGAACACATGCGTATTCATACAGGTGAAAAACCGTTTTCATGTGATCATTGTGGCCGTAAATTTACAACTTCATCACAATTTAAATTACATGTGAAGCGACACACAGGAGAACGCCCATGGAAATGTGAATTCTGCGCCAAGAGTTTCTTGCACAAAGACACATGGAAATGTCACGTACGAAGGCACAAAGGTGAACGTCCATTCCAGTGTTCTCATTGCAATCGCGGTTTTACTGAGCAATGGGCCCTAAAAAAACATTTGCGTCTACATACCGGCGAAAAGCCATATTCCTGTGAAATATGTGGTAAAGCTTTTGCTGACTGCTCGAATTTAACGAAACACAAAAAAGTTCACCgagaaaataaagttttgGCTATAAATAGTGAGTTGTCAAAATCTTCGCCGGACGCCGAGCTCTGGCAAATATTACCCGCGTCCCAAGGTGATGAGGATGATCCACTTGAGACTCATATCACTCAAGTAATCGCCACTGAAGAAGGATCAGAGGATGGGAGGCagcaaataatttatgtatcgTATCCAGACCCTGACGATCCAAATCAATCACGAACATTACATTTTGGTATGATCGAAGATAAAGAAACTGTTGGAGCCGGACAATCTTTGCCAACATTGGACATCGAGGAAAGTCAATTGATTGCGAAACATGATATGCACTCGACTGGACAAACAGATGACCATATAGGTATTGCACTAGCCGAACAAAATCTGCAGTTACAAATCACAGATGAAGATGGAAATCCAATTCCTTTATCAATTCAAGATGCTCGACAATTATTGGCACAAGGTGAATTTGTGAGTCAATTAAATGATGGCCAGACAATACGCGTTCATTCGGGGATTGTGTCAGAAGAATTGGCTGAGCAATTGGGGGTTCATGTACATGAAGGGATCCACATTAATTCGATTGATAGTATGGAAAACGGTGAAGGAACATCAGTGATTGCGACATCTTCATCCCAAGATAATACTGATGAAGTTTTGAAAGTACTTGCGGGTTCAGACGATCAAGCGACAGATGTTGCCGTGAATCAAATGACAAACGATGGTTCAGAAGATATGGCAGATGGCGAACAAGCAATTGAATTTACAACTCAAGATGGGCAGAAAGTACGGCTTGTTACTTCATATCATGTTGATCCATCACAATTAACTTCGGAGTACCTGACTATAGTTTAG
Protein Sequence: MAEVSLYDSTICRLCAEDNNNGELLYGGGDEEPDLSTMVNRYLPLKIRNDGKLPRTICPGCNIQLEATIQFFDLLVDGQRRIRQLWKQQQEQQRKADRERLRAERENTELSIETPELDGYEQQDPEDRYEQQIIIKIMPDGSMYATEHDMSLQMEGLAKPRRKRGRPPKVHAEGGTKEAEEVVHDGGSQGEDDKQDDEDEIDGDGRRRRKRKVPKRFSEAVQGKELERIFKEEGVIDDEEDEEVDRDYDDTEEQLNVPVTDANAEVIGHLETEEGKDLGELVIVNRGRGRGRPKLRRKKTRFTCNLCGRGFLQRSRYIMHKTFHKSVRYECSECNKRFTNIDNFTLHQKTTGHVGEEIIKALPEKSSLQEDIRKIRDDGSPMLSEGPPEKLENSEMKIDEQWHIELSQNAKPIKSVYTFSCDECDEKFDTKDDCQMHMRIHEPEKLFPCSVCDRTFPYQSTLESHLLTHDTSKIEKGFACDICGKVLNHPSSVVYHKEAEHNNGRRFVCNKCGKSFKHKQLLQRHQLVHSDDRPYVCKSCNSSFKTKANLINHQLTHTGEKKYACEKCGQQFAHKTSLTLHHRWHNGHKPYTCEVCNKSFSQNGNLQEHMRIHTGEKPFSCDHCGRKFTTSSQFKLHVKRHTGERPWKCEFCAKSFLHKDTWKCHVRRHKGERPFQCSHCNRGFTEQWALKKHLRLHTGEKPYSCEICGKAFADCSNLTKHKKVHRENKVLAINSELSKSSPDAELWQILPASQGDEDDPLETHITQVIATEEGSEDGRQQIIYVSYPDPDDPNQSRTLHFGMIEDKETVGAGQSLPTLDIEESQLIAKHDMHSTGQTDDHIGIALAEQNLQLQITDEDGNPIPLSIQDARQLLAQGEFVSQLNDGQTIRVHSGIVSEELAEQLGVHVHEGIHINSIDSMENGEGTSVIATSSSQDNTDEVLKVLAGSDDQATDVAVNQMTNDGSEDMADGEQAIEFTTQDGQKVRLVTSYHVDPSQLTSEYLTIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00452087;
90% Identity: iTF_01560623;
80% Identity: -