Basic Information

Gene Symbol
ct
Assembly
GCA_030523125.1
Location
JAPYZG010000777.1:35719-50543[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 5.9e-28 5.1e-24 84.0 0.0 2 72 447 518 446 523 0.95
2 4 1.3e-32 1.1e-28 99.0 0.0 3 77 869 944 867 946 0.96
3 4 1.2 1.1e+04 -3.5 0.3 35 54 1040 1059 1039 1076 0.82
4 4 5.7e-31 5e-27 93.7 0.1 3 76 1122 1196 1120 1199 0.96

Sequence Information

Coding Sequence
ATGATTATTGAGATCAGCCAATTGGTGGAAGAGGTTTCCAGGTTGCAGCAGAGTTTGCAGCGGCTCCAGGAAACGAGTGCGCAAGCCACAGCACGTTTAGAAGAAGAATTGGAAACACGAAGACAGCATATTAATCGATTGGAGAGTAAACTCGAACGGCAACGTGATTATGACGATATGAAACGTGAAATAAGTGTTTTAAGATCAGTGGACTTATCACAAATACCAACTAGTGAACCTGGCAAGAGTTTAGAGCATTTATTGATGGAAAGGACGAAAGCATTGCAACAAGCTGAAACATTGAAGCCTCCAAGTACACCAGACACATTCGGTGGACTAGCTTCGCCCCTGCAGCGCGCCGCTACCGCTTCGCCCCATGGCAGTGTCGCGAGTGGTGGCATCGGCGGAAGCGGTACCCCCGCGTCAATTGTAACCACCCAACAGGCGCTCCCAACACGCTCCACCCCGACGCCCTCGTCAGTAACCTCAACAGCCACCTCGACTCTCCTATTTCCACCACCTCTCCAAAATGTTGAAACATTCGGATCTTTTCTGGGCGAAGAAATTGTTGCTAATTGGAGGCGAACATTGGAAcgatcaataataaatcagcaacaacaacaacaacaacaacaacaacaacaacaatcacAATTGTCAATAGCACCACTATCCCAATTGTCTCAGCTCCAACAGAGCACAACTGCCCAACACACGttgcaacaacaacaacaacagcagccgATACACCAAACATCAATCCATAATCTACATCCACCAACGACACCAAATCTAAATCACCTTCCATCACCAACAGATCCaacctcatcatcatcatcatcaatcaaCAATCCGGCGCCGGTGAAATCATGTACGCCACTTCTGGTTGGATCATTGGACGCAACAGAGAAAGCACCAACGCCAATACCAGGACATGAAACACCAGCACCACCAACTCCATCATCAACTGTAGCCTTGACATCACCAACAGTCACTCATCAATTGTCAGCCAGTATGTTAGATACCACTTGCAATATTAATGGATCGACGTTATCGAATATAATAGGAAATCATCCACCAAAAAGTCCACAAGAAGAGTCATgtcacaataacaataatagcCACTATTTAGCTAACAATAATATCGGCGGATTGAGTGTCTTGGACTCTATCAAAGGCCCATTTAGATTTGACGATAGAACACATCCGTTTAGATTCGGTGATGAATTTGGCGCAGCGAGTATGGCTGGACGTTTGGGAGAATCATTGATACCAAAGGGTGATCCAATGGAAGCACGGTTGCAAGAAATGCTACGTTACAATATGGACAAATATGCCTCACAAAATTTGGACACGTTACATATTGCACGGCGTGTTAGAGAATTGTTATCGATACACAATATTGGTCAACGACTGTTTGCTAAATATGTTCTCGGATTGAGCCAAGGGACAGTCAGTGAATTATTGAGTAAACCTAAACCATGGGACAAATTGACTGAGAAGGGACGTGACAGCTACAGAAAGATGCATGGTTGGGCGTGTGACGAGAATGCTGTTCTGCTACTCAAGTCCCTGATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAAGGCTTACCAGCGTTTGCGCGTGGACCACAAGATGgaggcggtggtggtggtccAGCCGACATAAATGACGAAAGGATTGCCCATATGCTGTCGGAATCGGGTCATCTACAATTGAGCCGTGAACATGATACGTCCAATGATGCTGATAGTAAAAGCCCAAGTCGTTTGGGTTGTCCTAGTCCGTTTGGCAAAGACAGATTTGACAGTCAAAATCGTAGattaaagaaatatgaaaacgaTGACATTCCCCAAGAGAAGGTAGTAAGAATATATCAAGAGGAATTAGCCAAATTGATGGGCAAAAGAGATGAATTACGCGGACCGCGTGACTTTCCACCAAGTGCGATGTTTCCACACTTTTTCAGTGGTGGCCAGGCTCTCCAAGGAATGGAGCGTCCGCAAGACGACATTCGGCTTGCGTTGGATGCATATCATCGAGAATTACAAAGATTAAATGCCGCACCAGGCCAGAATGCAACGTTGGCAGGATTGCCGGGATTACCAGGTTTGCCGGGACTGTTGGCACTACATCAACAGGCCTTACACCAGAATCATCTATCGGCGAATGGCGGTAGTGGGACTGGTGGTGTCACTACTGGTGGCGGAGTTCAAGATCTCAGTCTTGGCAAAGCCGAAGCACgtaacaaaataatgaatggagTTAgcgatgaagagaaagaaaaaatggaagaagcAATAAGGCATGCAGGGAGTGCATTTTCGTTGGTCAGGCCAAAACAAGAACCAAGTGGAACTCAATCAACACCTGGTGGTTCTAGTGCAAGTTCACCACTTGGCAATTCAATATTACCACCTGCTATGACACCTAGTGATGAATTCACTGGTGCGGCGGCAGCAAGTCCGCTACAAAGAATGGCATCGATAACTAACAGTTTGATCAGTCAACCGTCCACACCAACACATCATTCGGCAAATCAACGACCATTAAAAGCCGTATTACCACCAATAACTCAACAACAATTTGACCTTTACAATAATCTCAACACGGAGGACATTGTGAAGAGGGTGAAGGAGCAATTATCGCagtattcaatttcacaacGACTTTTTGGAGAGTCAGTGCTTGGATTGTCACAAGGATCAGTCTCGGATTTATTGGCACGACCGAAACCCTGGCACATGCTTACACAAAAAGGACGTGAACCATtcataagaatgaaaatgtttttggaAGACGAACAAGCTGTGCATAAATTGGTTGCAagtcaatataaaattgcgccggaaaaattgatgaggaCCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGTGGAACACCAATGAAACCGATGCCACCGACAAAATTGGTGCAGGAGCAACTTCAAAATGCTGCCAAAGCTCAAGCGGCAGCGGCAGCACAAGCAGCAGCACAAgcggcagcagcagcagccGCAGCTGCTGCTGCCCAACATCAACAAGACAATCAAATACAATTGGGCCCACCCCAACCAAGTCCACAGCAACATCAGCAGCATTCGCAACCAACTTTACCGATGATGTTAACCCCGCCAGGACCTCATCATTCACACAGTCAAATGTCTATCCAAGAATTGCAGAAAAAACAAcaccatcaacaacaacaacagcaacaacaacaacaacaacaacaacaacaacaacaactgGGTCTACATTCACCACACCAAATGACACCATCGCCGTTACGAAGTCTACATCCGCACATTTCACCGAGTGTCTATGAAATGGCAGCGCTAACCCAAGAACTCGACACCCAAACTACCacaacgaaaataaaagaggCACTATTAGCTAATAATATTGgccaaaaaatatttggcGAAGCAGTATTGGGTTTGTCACAAGGTTCAGTAAGCGAATTACTGAGTAAACCAAAACCATGGCACATGTTGAGTATCAAAGGACGTGAGCCATTCATCAGAATGCAATTATGGTTATCGGATCCACATAATATTGAGAGACTTCAAGCACTGAAAAATGAGAGACGTGAAGCAAATAAGAGACGACGCAGCAGTGGTCCAGGTCACGATAACAGCTCTGATACATCCAGTAATGATACTGCTGAATTTTATCATGCGTCATCTCCTGGTCCAGGACCACCATCGGCCAAAAAACAACGTGTACTATTTTCCGAAGAGCAGAAAGAAGCATTACGACTTGCATTCGCACTCGATCCCTATCCAAATGTCGCgactattgaatttttagcAGGAGAACTGGGTTTATCATCCCGTACAATAACAAATTGGTTCCATAATCATAGAATGCGTTTGAAACAACAAACGCCACATGGACAGCCCGAATCACAATCACCGCGAGAACCTGGGCAGCCGTTTGATCCAGTGCAGTTCCGTTTACTCCTAAATCAACGACTTTTGGAATTGCAAAAAGAACGATTGGGTTTGGGAAGCATGCCAATACCATATTCACCATACTTCAATCCAAACTTGGCGACATTAATGAGTAATGCAATCAAAGAACAGTGTTCGGGATTGGATTTATCAATGGGTGCACTCAAACGTGAATTAAATCAAGAATTTGAGGATGATGACGCGGATGGTGATGATGCCATGAGCAATCTTGGAAGTGAGGATTCTGATGGTTCGACTGGTAGTATTAAACGCGAGCCAACAGATCAAACACAGAATGTACCATCACAAACGAGTGGTGGAGtatcaacagcagcagcagtagtAGCAGCAGCCGCGGCCGCGGCTGCTAGATCGAATCGAAGAAAACCTGCAGCGCCACAATGGGTGAATCCAGAGTGGCAGGAACCAGCGAGAACTGGAGATGAAGTTATTATAAATGGTGTGTGCGTTATGAAAACCGACGATTATGGTGTAAAAAGAGAGATTGAAGAGACAATTAGAGTCGAACCGACACCCGTACAAGACAGATACGATGATGACAATCAAAGTGATGTGTCATCTGTTGTATCGGGTGCTGGCGATGGTAATAATGGACCGCCAGACCATGATCGTGATAGTGTTAGCCCAAGTCCTATGAAATCCGGGGATAATAGTCCAATGGCGTCACCAACGTCACGACCACCATCATCAACGCAGCAACAAATTGTCCAAAATTCGGTTGACAGTCCGAAAGAAGTGAAACACGAACCGGAAGAATCGTGGGACTATTGA
Protein Sequence
MIIEISQLVEEVSRLQQSLQRLQETSAQATARLEEELETRRQHINRLESKLERQRDYDDMKREISVLRSVDLSQIPTSEPGKSLEHLLMERTKALQQAETLKPPSTPDTFGGLASPLQRAATASPHGSVASGGIGGSGTPASIVTTQQALPTRSTPTPSSVTSTATSTLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIINQQQQQQQQQQQQQSQLSIAPLSQLSQLQQSTTAQHTLQQQQQQQPIHQTSIHNLHPPTTPNLNHLPSPTDPTSSSSSSINNPAPVKSCTPLLVGSLDATEKAPTPIPGHETPAPPTPSSTVALTSPTVTHQLSASMLDTTCNINGSTLSNIIGNHPPKSPQEESCHNNNNSHYLANNNIGGLSVLDSIKGPFRFDDRTHPFRFGDEFGAASMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGLPAFARGPQDGGGGGGPADINDERIAHMLSESGHLQLSREHDTSNDADSKSPSRLGCPSPFGKDRFDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGKRDELRGPRDFPPSAMFPHFFSGGQALQGMERPQDDIRLALDAYHRELQRLNAAPGQNATLAGLPGLPGLPGLLALHQQALHQNHLSANGGSGTGGVTTGGGVQDLSLGKAEARNKIMNGVSDEEKEKMEEAIRHAGSAFSLVRPKQEPSGTQSTPGGSSASSPLGNSILPPAMTPSDEFTGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDEQAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAAAQAAAQAAAAAAAAAAAQHQQDNQIQLGPPQPSPQQHQQHSQPTLPMMLTPPGPHHSHSQMSIQELQKKQHHQQQQQQQQQQQQQQQQQLGLHSPHQMTPSPLRSLHPHISPSVYEMAALTQELDTQTTTTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDPHNIERLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHASSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQTPHGQPESQSPREPGQPFDPVQFRLLLNQRLLELQKERLGLGSMPIPYSPYFNPNLATLMSNAIKEQCSGLDLSMGALKRELNQEFEDDDADGDDAMSNLGSEDSDGSTGSIKREPTDQTQNVPSQTSGGVSTAAAVVAAAAAAAARSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMKTDDYGVKREIEETIRVEPTPVQDRYDDDNQSDVSSVVSGAGDGNNGPPDHDRDSVSPSPMKSGDNSPMASPTSRPPSSTQQQIVQNSVDSPKEVKHEPEESWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00996924;
90% Identity
iTF_00996924;
80% Identity
iTF_00996924;