Mcol008684.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Meteorus colon
Gene Symbol
ARID5B
Assembly
GCA_030523125.1
Location
JAPYZG010001865.1:1-11517[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.5e-24 1.6e-20 73.2 0.0 2 89 255 340 254 340 0.95

Sequence Information

Coding Sequence
GACGAGGTACTGACGATATCAGAAAAAGTGGTGGTGCGTGTTCACGATCTAATCACATTTCTATCTCCAACATTGGAATGGACCTGGGGTCGTGCAGTTGAATATCCACCGTCCAATGCATCATTGCATCAactaattgatgaaaataatcataaatatgataGTAACTTATCAGCAAATTCATTAGCTTCAGCGCCAATAACATTACCTCAAGTGCTAACTGATCCAGGAATCGATTTTTCTGATGTGGAAAAACATCAAAAAGAATATGAGATTAATTTGAGCGGTTGCAAAACACACGATGGACAAACGCGCGTCGTCGTACTGTCTTACCCTAGGTATTGCCGTTATCGTGCACTGTTACGACGTCTAGAGGGCGCAGAGCCATCATGGTTATGTTCATCTGTTGCGGCAGCACTTGGGGGATTCACCGCATTACCTGGTACTCGTGTTTTGTTTTGTCGTGATACGTTTGACTATCCCGATCTTGAAACACACGAATTATTGTGCAATCATTTAgCCCCAAAATTGAAAGGCAGACCgagaaggaagagaaagaaacgcAGTGTGTCACCTGGAGAATCTTCCAATGAGAGTGAAGCATCAGTTGCATCGACGTCACGTTGTTCAGTGATGCCAATTACAAATAGTATGATGGTATTAAAACCGCCGTCAATAGGTATAACTGAAGGTGCTGGCAGTCATACAAATACAGTTTGTGGCAGCGGTGTACGCAGAAGTGAACGCAATGCCAGtggtgatgagaaaaaattcataattgatgtCCAAAATTTCATGAACTCTCGTGGTACGCCTGTCGGCAAAATGCCACTTTTAGGTTATAGACAGATTGATCTTTATCTCTTCTACATAAATGTTCAAAAACTTGGTGGTTATGATGCGGTGAGCGCTGGTCGATTATGGAAATCTGTTTACGATGAAATTGGCGGTAACACTGGGTCAACAAGTGCTGCCACCATAACACGTCGCCATTACGAGAAGTTATTATTACCCTATGAAAGGCATCAGAAAGGCGAAGAGACTAAAATACGTCCCAATGCACGACGTAGTAAATCAATGTGTGAAGAAACACCGGAAGTGAAATCGGAATCTCCAATTCCATCCAcaccaccaccattaccaCTCATTGAAACAACGATGATTAATACAATGACAAACGATCACCCATCAGTAGCCACAACGCCATCACCACCTCCACCACAACCGTCACAAACACAACCCCAATCGACAGTTCAAAATCAGCTGCAACAACAACaagaacaacaacaacaaccacaacaacaacCGTCGATACAAACGTCGACGAACCAATTAACATCAAATTCGCCTTTATCTAGTGAAAAACCAAAGACTGAGGTGAAAACATCATCATTACGTAGTGTCAGAGTCAAACCTGATCGcttgaaatcattgaatacaATAATAGCGAGTACTAATATAAATACGTCGAGTAGTTACAGTCAAAATTCATTGCCAAGTCCACCGCCATCTTCAAATGGCTCCATAACCTCAATGTCTACGCCAGCAACTACGCCATCTACCACACCAACTGGCATACAAAATAATAGTGTACTCGAACGACAGTTGAACAGTCCACTAATGTCACAACATACACCGCCATCAAGTTCACCAGTTGTTTGTTTACCAGTTGTTCAAACGACAACGAATACGACGGCAATTGTGACATTGACTCCGCCACCGGACAAAGACatcaaagaattaaaattggatACTAAACAGACAACATTATTGGCACAGGGCAAAGAAAATATACCGTTAATTaccgaaaaattattaatacaacCGCCAAAATCACCGAGATCACCGGAAGTCATCGATTTAGAGATGGAAAGTGAGgttagaaatgataaaatagctATACCGAGCTTTAAAAAACgtaaattggaaatattaagAGAAGGTGGACTTGAAGTTACTGCTGTTGAGCTCGATTCAAGACCAAGTGTTATACAAGCAACGATAACGCCAATTCCCACGCCATTATTGACCgttaaaattgatgataagtCGATTtattcatcgtcatcatcttcGTCCTCGTCATCGTCTTCGTCATTAATTAGCAGTAGACATTCACCTAAACTCATCTCGGTTACAGTCACACCGGATATCGATCATATGTTACCATCACCTCAAGACATTCATCAATCGCGTTCGCAGAAGAAACATAATTCAcccataaataataataacagttgCAATAATGCTCGTGTAATTAATTTAGGTACATCagttaattcaaatttaattcaaatatataataatacaacgTCTTCATCGTTAACCAATACGATGACAGTTAACTCACCCTCTTCGCCAATAGCAACTCACGTTTTTGCTCCGCCTGCATTACCGACTGAACGACTACAATCATCGAAAACGCCGCCTTTGCCGCCTCGTGTTACCCAATCACGGTCGATATTTGGACATGGTGAACGGACAGTTTATGGTGATCCTAAAGATGTTTTATCACAAAATGTTGCTATTAATAATACATTTCGTGTGTTGGACTTGACTtcaaaacaacaacaacaattaaatgataaaacgACATTTTCACGTCCGAATTTGGAAATTGTAAGAGTACCAATTGTACCACGGCCAAATTTATCGAATTTAGAAGTGAAGAATTCGTCTGTTAGAGATATTAAAGTGACAGAATCGCCGAAAAAGAGTGCATTTAATTATCCAGTGATGTTGGATACACGAACAATGGCGTCTAATAATCTCGAAATAACATTGGTCAATCCAAAACAAACACAGCAACAGCAGCGAAAAAGTTGTACTTCGCCAGCGTCTTATATCAAACCGCCAAGTCCACCACTAAAGAGTCCGAACAACGGCATTTCACATCTTAATAGTAATTTACCAatgcaacatcaacaacatcaacaacatcaacaacaacagcagcaacagcagcaacagaaGATGCGACAGGTTAACGGAAAATATCCAAATCGTCCAGTTGAACAAATCACACCGTACACATCACGAAAAATGATGAACCATCAGGTTATTCCAAATGTACCAAACCTAAatcatattaataacaattgttattcatcAGCGAGAAATATTAGTCAACATCAACACCAAcatcagcaacagcaacagcaacggTCAATTTCGgtcgaaaaaagaaaatccgATTTTTTGTCACGCGATCATCCTAATCATAATCATCAcaatcaccatcatcatcgaAGAATTagtgaaagtgaaaaaagtttaattgcgtcacaacatcatcatcatcaacagcaacagcagcagcagcagcatcatcatcatcaacaacaccaacaacaccaacaacatcaacaacaacaacaacaacagcagcaacagcagcagcagcaacaacagcagcagcagcagcagcaattGATGATgcagaaaattcaaaattcgaGATCGAATGATAACAGACGACACAGTGTACCTAACTTACCGACTGGCTTTATTCCTTCAATACCACATGCCGCTACTGTGGCAGCACAAGccaattcgaataatttatatggcCATCATCATAATTCTCACCCATCTTctcagcagcagcaacaacagcaacagcatcatcatcatcaaatgtcGAATACTTCATCATCCAGAAAATTCTTACCACCGATGTTAGATCCAGTTTATTACTCAGCTATTTATAACGGTTTATTTCCACCGCCAATACCAACATCTACAAATGCGTCGCCATTTTTACAACCGGAATTTAGCAATTATTACAAAGAATTACTCGCGTCTTCAACACAATCAAGATTAACTATGGGACAACATCAACCAACAGTACCAACGTcgaaataa
Protein Sequence
DEVLTISEKVVVRVHDLITFLSPTLEWTWGRAVEYPPSNASLHQLIDENNHKYDSNLSANSLASAPITLPQVLTDPGIDFSDVEKHQKEYEINLSGCKTHDGQTRVVVLSYPRYCRYRALLRRLEGAEPSWLCSSVAAALGGFTALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASTSRCSVMPITNSMMVLKPPSIGITEGAGSHTNTVCGSGVRRSERNASGDEKKFIIDVQNFMNSRGTPVGKMPLLGYRQIDLYLFYINVQKLGGYDAVSAGRLWKSVYDEIGGNTGSTSAATITRRHYEKLLLPYERHQKGEETKIRPNARRSKSMCEETPEVKSESPIPSTPPPLPLIETTMINTMTNDHPSVATTPSPPPPQPSQTQPQSTVQNQLQQQQEQQQQPQQQPSIQTSTNQLTSNSPLSSEKPKTEVKTSSLRSVRVKPDRLKSLNTIIASTNINTSSSYSQNSLPSPPPSSNGSITSMSTPATTPSTTPTGIQNNSVLERQLNSPLMSQHTPPSSSPVVCLPVVQTTTNTTAIVTLTPPPDKDIKELKLDTKQTTLLAQGKENIPLITEKLLIQPPKSPRSPEVIDLEMESEVRNDKIAIPSFKKRKLEILREGGLEVTAVELDSRPSVIQATITPIPTPLLTVKIDDKSIYSSSSSSSSSSSSSLISSRHSPKLISVTVTPDIDHMLPSPQDIHQSRSQKKHNSPINNNNSCNNARVINLGTSVNSNLIQIYNNTTSSSLTNTMTVNSPSSPIATHVFAPPALPTERLQSSKTPPLPPRVTQSRSIFGHGERTVYGDPKDVLSQNVAINNTFRVLDLTSKQQQQLNDKTTFSRPNLEIVRVPIVPRPNLSNLEVKNSSVRDIKVTESPKKSAFNYPVMLDTRTMASNNLEITLVNPKQTQQQQRKSCTSPASYIKPPSPPLKSPNNGISHLNSNLPMQHQQHQQHQQQQQQQQQQKMRQVNGKYPNRPVEQITPYTSRKMMNHQVIPNVPNLNHINNNCYSSARNISQHQHQHQQQQQQRSISVEKRKSDFLSRDHPNHNHHNHHHHRRISESEKSLIASQHHHHQQQQQQQQHHHHQQHQQHQQHQQQQQQQQQQQQQQQQQQQQQQLMMQKIQNSRSNDNRRHSVPNLPTGFIPSIPHAATVAAQANSNNLYGHHHNSHPSSQQQQQQQQHHHHQMSNTSSSRKFLPPMLDPVYYSAIYNGLFPPPIPTSTNASPFLQPEFSNYYKELLASSTQSRLTMGQHQPTVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01560222;
90% Identity
iTF_00996118;
80% Identity
-