Basic Information

Insect: Meteorus cinctellus
Gene Symbol: -
Assembly: GCA_030523045.1
Location: JAPYZF010000090.1:245789-247086[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0021 0.18 12.3 3.0 2 23 130 151 129 151 0.97

2 7 1.8 1.5e+02 3.0 5.5 1 23 152 174 152 174 0.96

3 7 4.5e-05 0.0039 17.5 1.8 1 23 183 206 183 206 0.96

4 7 3.8e-05 0.0032 17.7 0.8 1 23 237 259 237 259 0.99

5 7 0.11 9.4 6.8 0.9 1 23 287 309 287 309 0.93

6 7 0.00015 0.013 15.9 2.5 2 23 318 339 318 339 0.96

7 7 1.9e-05 0.0016 18.7 5.1 1 23 344 366 344 366 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0021	0.18	12.3	3.0	2	23	130	151	129	151	0.97
2	7	1.8	1.5e+02	3.0	5.5	1	23	152	174	152	174	0.96
3	7	4.5e-05	0.0039	17.5	1.8	1	23	183	206	183	206	0.96
4	7	3.8e-05	0.0032	17.7	0.8	1	23	237	259	237	259	0.99
5	7	0.11	9.4	6.8	0.9	1	23	287	309	287	309	0.93
6	7	0.00015	0.013	15.9	2.5	2	23	318	339	318	339	0.96
7	7	1.9e-05	0.0016	18.7	5.1	1	23	344	366	344	366	0.97

Sequence Information

Coding Sequence: ATGACACCTCTCGGAACAAATTCTCAGgtcacgaaacaaaataataatatgaaaatgaacaatcaGAATAAGTCTAATAACACAAGCTCTGGACCATCATTGTATCTCCAACAAACTGGTGCAACAGGGCAGACCTACAGATTGATAATACAAGTGGACAAGGTACGGGCAAGGCCCGGACCAAAGTCAAAAAAACGAGAGTTAATGAAAATCACAACTAGTAATTACAAACAGTTACATGAACTTGATAGCATACCGAAGAAAGTATCAATTGAAGATAAACCGAAGGAGGATGTTATAATGGATGTGGATCCACAATCTATTGGTAAATCTCAAGAAGAGAAACTGACTACCAGCCATGATGATtccttgaataaaaaaagtattcaatgCTCAACTTGTCAACATTCTTTCGAATCGATGCGAGcattatttttacatcaaaaGAAACATTATGTGTGTCAATTTTGTGATACACCATGTGAAACTAAAGTTTTATGTGAACATCATGAGAAAATGCATCTCAGtaacaattctatttttccgTATAAATGTCTTTTGTGTTCAAAAACATTCGATGATAAACGAACTTTAAAAGTTCATAGTAAAATATCACACTCAGAATCAATATCAGTTATAAGAGAGAAGCCGGCATTGACACCAGATGATCATAAAGTCCCGGAAAGATCTGGAACGGATAAATCGAAATACCAGTGTGAGATATGTAGAATCATTTTCAAGAATGAGGATACTTACAGGAGTCATGTGAAGTCACATGCAGTGGAAGTAGAAATTATAAATGGTGAAAATACTGTTGATACGAAGAAGTCGCAAACAAATCATGGGGCGAAAGTCAAATATTCATGCAAAGTTTGCTGTAAAGAGTTTGATACTCCCAATGAGGCTGAAGCTCACACATTTGCGCATGTTGAAATAACTGAACCTGACCGCAAAtgtaatatatgtaaaaaaatattcaagtctgagaaaatgttgaatgatcACCTGGCTCATCACTTATCGCGTGCCCATCATTGTGTTGTCTGTCGTAAAGCGTTCATAAATCGTACCACATTAAAAAACCACATGAGAACGCACAgaaacatcaaataa
Protein Sequence: MTPLGTNSQVTKQNNNMKMNNQNKSNNTSSGPSLYLQQTGATGQTYRLIIQVDKVRARPGPKSKKRELMKITTSNYKQLHELDSIPKKVSIEDKPKEDVIMDVDPQSIGKSQEEKLTTSHDDSLNKKSIQCSTCQHSFESMRALFLHQKKHYVCQFCDTPCETKVLCEHHEKMHLSNNSIFPYKCLLCSKTFDDKRTLKVHSKISHSESISVIREKPALTPDDHKVPERSGTDKSKYQCEICRIIFKNEDTYRSHVKSHAVEVEIINGENTVDTKKSQTNHGAKVKYSCKVCCKEFDTPNEAEAHTFAHVEITEPDRKCNICKKIFKSEKMLNDHLAHHLSRAHHCVVCRKAFINRTTLKNHMRTHRNIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01560730;
90% Identity: iTF_00997309;
80% Identity: -