Mcin002985.1
Basic Information
- Insect
- Meteorus cinctellus
- Gene Symbol
- -
- Assembly
- GCA_030523045.1
- Location
- JAPYZF010000063.1:447890-454103[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 5.5e-05 0.0047 17.2 4.5 2 23 156 178 155 178 0.97 2 21 0.0048 0.41 11.1 4.2 1 23 188 211 188 211 0.93 3 21 2.2 1.9e+02 2.7 0.2 5 20 522 537 521 538 0.91 4 21 0.073 6.3 7.4 0.4 2 23 548 569 547 569 0.96 5 21 0.93 80 3.9 0.6 1 20 596 615 596 617 0.85 6 21 0.038 3.3 8.3 1.2 2 21 678 697 677 698 0.92 7 21 0.0021 0.18 12.2 0.2 1 23 706 729 706 729 0.98 8 21 0.0019 0.17 12.4 0.5 3 23 739 760 737 760 0.90 9 21 2 1.7e+02 2.9 1.3 2 19 782 799 782 802 0.91 10 21 0.088 7.6 7.1 5.4 2 23 810 832 809 832 0.96 11 21 0.74 64 4.2 1.5 1 23 843 866 843 866 0.86 12 21 0.003 0.26 11.7 0.1 1 20 892 911 892 913 0.94 13 21 0.013 1.1 9.7 6.9 1 23 920 943 920 943 0.94 14 21 2 1.7e+02 2.9 1.6 2 23 953 975 952 975 0.95 15 21 0.008 0.69 10.4 0.2 1 19 1023 1041 1023 1044 0.95 16 21 0.9 77 4.0 2.6 2 21 1129 1148 1129 1149 0.94 17 21 0.0032 0.28 11.7 9.7 1 23 1156 1178 1156 1178 0.97 18 21 3.5 3.1e+02 2.1 3.1 1 21 1190 1210 1190 1213 0.82 19 21 0.0029 0.25 11.8 0.2 3 23 1374 1395 1373 1395 0.98 20 21 0.033 2.9 8.5 0.5 2 23 1471 1493 1470 1493 0.95 21 21 0.019 1.6 9.2 1.7 2 23 1530 1552 1529 1552 0.94
Sequence Information
- Coding Sequence
- atggcacGTGTTGTAATTTACGATGGACATTCATCGATTATTCCTGTATTATTTGCAACATATGATCCACAATGGAAGCCTTGCCTGgatcacataaaaataaaagaagagccACTGGATAGCGATGCAAGTGACGATAAACATCTTGAACATAATGGTAGTGATGAAGAATCAACGATCACAGAAAACTCGCAAATGAAGAACGCTGCAGGTTCGTCATCAACGTGTTtgaacaacaataaaaatcgcGTAGATCATTCTGGAGTTTCCAATTATGATAGTAAAAATAAgccaaaaaattcaatagccAATCAAAACCATACTGACACTGGCGTTGATATAATTAATAGGAGGTTGCGCACGCGTACTAAATCTACTCTTGTAGAATGTGACATTTGTTATGTCGCATTTCCGGGAGAATTGGTATTAAAAgcacacaaaaattattatgctAGAGGAGAATCAACATGTCACATATGTAAAAAACAATTCACTTCACCAATACACTTAACATCTCACAGACGTTCTGCTCATCGTGGTGATGGATGGAGTCGCttcaaatttgaatgtaattattgtaaGCTTGGATTCAAACAAAAGCTCTATCTACAACAACACATATTTCACCgccacaatataaataaaattctcgaTAGTAAAAAATTCCGTCTTCGGATGAGGAGTCGTAAAGCTACGATCGAAAGAATTATGATTGATTCGAAATCACGTGATCGTCAACGAATCAAGAGGAAACAAAATGATACAGTGCTGGTTGAACCattgcagaaaaaattttctatgcgcaaaattcataatgaaatcgATTCACTATCTGAGGATCAAATTGATGAAGCCAATCGATCTTGTAGGGATGACGAAACAAAGGACATAGAATCGCAgtcatcaatttcaaatccgaaaaatcataatattgtTGACAAAAGTGTTAATAGTTTATCGAATTCGTCAGCCCAACCGCCATTCGTAAAAATTTGTGCGATACCTCATGAACTTGAAGCTCTATTAAACGACGGTGAGAGCAGTGATGATACTTCCAGTACAGACAGTGATGTCAGTGATAGTTTCAGTGATTCAGAATTGAGTGACCCACCTTGCTATAGACCCACAAAAACCTATAGCTTGCGTTCGACGAGTAGGCTTGCAAATCCTATAACTCCAAATCGTTCAACACAACGTAAATGggcaatattaaaaaaacgttttaatattcaaagttGTCAAGTCAGAGTGGAACGATTGAGTCTCCCTTCTCCGAGCGACTATGAATCGACAAAAGATGTCTCAGATGTTGCTAACAGTAAAGAGAATGAGaccattcaaattaattctatgCCAACAGTTGGCATGGAATTGAAGAATCTTGAGTGGGCTCTGAAGAAATTGGAAGCGGTGAATCAAGGGCAAGAAAGCCTCACAGAAGAAAATCCAAATATACTGGAAAAACGTCAGCAATTGTGTGAATCAACAAATGCAGTATCCGTACTATCTCATGACATTACCACAGAGTATTCATCCGCAACGAGaatgttatatatatcaagTTTATGTCAGACTAGATATACCACAAAGAAAAagttaatttatcattacttGTGCTTCCATACAAACCCACAATATCAGGAATGCGCTGTATGTCGATCATGTTACGCTAATATCTCTGAATTGAAGGAACATCTGATGGAACATTGCATTGAAATACCAGAATCACCACAAGAGAAATCTCCGATTGATCCCGAAGAATCATGTGAAAATTCAAAGGagaaatatatgtgtagagGTTGTAAGAAAAAGTTTTGGCTGGTGTCATATTTGAAAGATCACGAAAAAAGTTGTGAAATACTACATAAATTACAAGAAACCAATAAGAATCAACCACAAAACaatgatgaagtaaaaaaagacGAATCGCCAAAAAGTATTTTACGAATGCGATTGATCCAGAGCGATGGCCGTGACGATTCCAGTTTACAGACAATGCAAGAATCCGATGAGCGAGCTTCCATGTCGCTTGAATGTGCTGTCTGTCACACGACATTTAAGaatgcaacaaaatttttggagcataaaaaaaaatattcacccaCTTCCATCAAATATCATTGCGGTCGTTGTGGTACACCTTTCCCGTCGCCTTCAATATTAGCCACACACACAAGAACAGCGCATGAGCCCGAATCAGCGTTCGAAATAGTTTGTATCATTTGTGATCAAGGCTTCCGTGAAAAAAGTTCATTGCGGCAGCACATGTTGCACATACATAATGATGAGATGAAAGATGATCCATTGGATGTTATACCAAGAACTGAATGCACTCACGAAAGAACATGTTCTGTTTGCAAGTTAATTTTTCCCGATCGTAAATGTTACATTGAGCATTCAATGCATTATTATGACGACAATGTCATTAAGTGTTCTACTTgtcatgaaacattttcaagcCAACATAAAGCACTTAGTCACAAAAAGAAAGTACATTATACAGAGGAGATGAAAAAGGAACAGATATATTGTTGCCCTCTTTGTAACGAGGGATTTATTTATCCTATAGACATATATTCGCACACGTACCACGTCCATGATACCGCCATTCcaacagaaaaatatgtatcaatGAGTGAAGATAAACAGAAAAGTAACCAATATGGATTGTTACATACATGCCGGATCTGTGATGCAATGTTCAGTACAGCAGTATCATTGAGTGATCATCAATCAGAATATTCTAACACAGGTAATCATTTCTGTTCCCATTGTCCACGACGATGTAAAACACGCCCATTATTGGAAAAACACATTAAATTAACTCACAGCAGTCCACGTTGTAGCGATCACATTAAATGTAATTCTTGTGATGAAATTCTTGCATCAAAAGCGTCATGGAATTGTCATATGAGACACATTCATTCATCGTTGGATTCTGATGATCGATCATCGAAAACGCATACAGATGAAGCATATTCAAAAGAATACGGGGTTGAAAAAATTGCTGtcaatgaaacagaaaataatagtGATCCCCGTACACCTCATCCAATAGGGATAGAATATACGTGTGCATTGTGTGATGAACAATTCATGAATAGTACGGATTTAAAAACTCATTCACTCAATTACGGGAATACGTGCATCCTCAACAATGCCGAGATTCTTAATACGGATTTCTCAATTGCTAGTATTTATTCCGTCAAACCAGAAGATTATGAGAAATTATGTAATGCAGAAGATGATAGTAGTAAATCAATCAAGATAGATCGGCAAGATAATATTTCTGGAATTACAGATAAAGTCACGGAGAGTGGTGTACTTGATAATACAATGGAAATAAGTGTAAATAGCGATTTGAATAGGCCCAATCCTAATAATACATGTCAGATATGTAAAGCAAATTTTTCATGTCGAAAGTCATTGACAAAACATGAACGTCTATATTCCAATACCGGCGAtcatgaatgtaaatattgtcATAGGAAATTTCGAACTATTGAACATCTCCAAACTCACAACAGAAAACATGAAAGTAGGAAATCGGAAAGTAATATTCCACCGCATTATTGCAAAACGTGCGACGAAAAATTTGGTTCCGAGAATTCGAAAATAACTCATTTCGCTCATATACACCGTAAATTATTACGGCGCCAACCACATGCAGGTGATTACAATGGACGTCGCCATTCTACTCGTCAACAATCGAAAATATCGCACCAAACAAATTTAGATTCATTCATCAGGCGCGATCCAGAGAGTGAACAATCAACGAAGTCGTATGAAACTCTTCGTACTACTGGGATAGATTTGAGTAAGGAGATGCttccattcataaatttgGGTATTGATCGAAGACTGAATTCAAAATCTCTACCTGAATCGCAACCGTCACAAGTTACACTGCACAATATCCAAATGAGCCATCCggtaataattgatgaaaatacagaAGAAAGTTCAAACGCATCATCAGTGGTTGCACTCGATAATTCGACAGATAAAATTTCAGAGAAAGTACCCGAAACAGTAGAAACATATGAAGAAGTTATCGAAATACCACAAAACGTAATTGAAGGACAAAAGCAAACTGTGGCAGCAGAACCGGAGGCATTATGTGACGTTTGTGGAGACGTCTTTACGAATCGAAATGGATTAATcgatcatcaaaaaaaaacccatGACATTGATTTGAATATAGATACTCTAAGTGATACGCAAGAGGAGTACATTGACATAGAATTGATAAGTGATGACGAAGTACGGTATGATCCACCATCAACCAATTGTAACAAAACAGATCtcgatattatatttgatagtGATTGCATACGTACCTACAGTAAAACATGTACGGGTACGCGAACATCAAAATCTCTGAGAACacattggaagaaaaatcaattgactTGCAGAATTTGTAATTCATTATTCTCCAGTTTAAATTCATTGGTTAAACATTTAGAAAAAGAACATCAGACTGATTCACCAGAAAAAGTAGATAATATTCAGAATCCGCGCGTATCAAGTTCGAGTAAAATTTTTAACCCAGAAGAACGAATTAACTTTCGTCATGTGCAGTTGTGTTGTAGATTCTGTGGGAAACAATTCGTTAATGATCagtatttatatgaacatattAAAAATGCTCATGCGAATGATTTAACTGTAgtcaaatcaaaaaaatcgGGATTGCTACAAAATAGTAATTTATTGCTGGAGAATTTCAATGAGACTGCTCATACTCAGGATAATCCgcaaaatatcaaatacacTCATCCTAAACTATCAAGAGTGACGATTGTAAAAACAACagatgttataaaaaaaattgatgacaatttaattttaggAATTAAGCCAAAACTTGTATTAGATTTACCaccaaattcaattaatatcaactCTACGCGATGTCGTAAAATTCCGATATCAAAATTAGTTAGAACTATTCACAATAGGCCAATATTACCAAAACCTACTTCACTCCACAATAACGACATGTCGcgataa
- Protein Sequence
- MARVVIYDGHSSIIPVLFATYDPQWKPCLDHIKIKEEPLDSDASDDKHLEHNGSDEESTITENSQMKNAAGSSSTCLNNNKNRVDHSGVSNYDSKNKPKNSIANQNHTDTGVDIINRRLRTRTKSTLVECDICYVAFPGELVLKAHKNYYARGESTCHICKKQFTSPIHLTSHRRSAHRGDGWSRFKFECNYCKLGFKQKLYLQQHIFHRHNINKILDSKKFRLRMRSRKATIERIMIDSKSRDRQRIKRKQNDTVLVEPLQKKFSMRKIHNEIDSLSEDQIDEANRSCRDDETKDIESQSSISNPKNHNIVDKSVNSLSNSSAQPPFVKICAIPHELEALLNDGESSDDTSSTDSDVSDSFSDSELSDPPCYRPTKTYSLRSTSRLANPITPNRSTQRKWAILKKRFNIQSCQVRVERLSLPSPSDYESTKDVSDVANSKENETIQINSMPTVGMELKNLEWALKKLEAVNQGQESLTEENPNILEKRQQLCESTNAVSVLSHDITTEYSSATRMLYISSLCQTRYTTKKKLIYHYLCFHTNPQYQECAVCRSCYANISELKEHLMEHCIEIPESPQEKSPIDPEESCENSKEKYMCRGCKKKFWLVSYLKDHEKSCEILHKLQETNKNQPQNNDEVKKDESPKSILRMRLIQSDGRDDSSLQTMQESDERASMSLECAVCHTTFKNATKFLEHKKKYSPTSIKYHCGRCGTPFPSPSILATHTRTAHEPESAFEIVCIICDQGFREKSSLRQHMLHIHNDEMKDDPLDVIPRTECTHERTCSVCKLIFPDRKCYIEHSMHYYDDNVIKCSTCHETFSSQHKALSHKKKVHYTEEMKKEQIYCCPLCNEGFIYPIDIYSHTYHVHDTAIPTEKYVSMSEDKQKSNQYGLLHTCRICDAMFSTAVSLSDHQSEYSNTGNHFCSHCPRRCKTRPLLEKHIKLTHSSPRCSDHIKCNSCDEILASKASWNCHMRHIHSSLDSDDRSSKTHTDEAYSKEYGVEKIAVNETENNSDPRTPHPIGIEYTCALCDEQFMNSTDLKTHSLNYGNTCILNNAEILNTDFSIASIYSVKPEDYEKLCNAEDDSSKSIKIDRQDNISGITDKVTESGVLDNTMEISVNSDLNRPNPNNTCQICKANFSCRKSLTKHERLYSNTGDHECKYCHRKFRTIEHLQTHNRKHESRKSESNIPPHYCKTCDEKFGSENSKITHFAHIHRKLLRRQPHAGDYNGRRHSTRQQSKISHQTNLDSFIRRDPESEQSTKSYETLRTTGIDLSKEMLPFINLGIDRRLNSKSLPESQPSQVTLHNIQMSHPVIIDENTEESSNASSVVALDNSTDKISEKVPETVETYEEVIEIPQNVIEGQKQTVAAEPEALCDVCGDVFTNRNGLIDHQKKTHDIDLNIDTLSDTQEEYIDIELISDDEVRYDPPSTNCNKTDLDIIFDSDCIRTYSKTCTGTRTSKSLRTHWKKNQLTCRICNSLFSSLNSLVKHLEKEHQTDSPEKVDNIQNPRVSSSSKIFNPEERINFRHVQLCCRFCGKQFVNDQYLYEHIKNAHANDLTVVKSKKSGLLQNSNLLLENFNETAHTQDNPQNIKYTHPKLSRVTIVKTTDVIKKIDDNLILGIKPKLVLDLPPNSININSTRCRKIPISKLVRTIHNRPILPKPTSLHNNDMSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00997278;
- 90% Identity
- -
- 80% Identity
- -