Mcin004066.1
Basic Information
- Insect
- Meteorus cinctellus
- Gene Symbol
- zfy1
- Assembly
- GCA_030523045.1
- Location
- JAPYZF010000091.1:462717-474638[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 7.4 6.4e+02 1.1 1.2 2 22 13 33 12 33 0.89 2 18 1.2 1.1e+02 3.5 0.4 3 23 343 365 342 365 0.89 3 18 3.8 3.3e+02 2.0 2.9 3 23 428 447 426 447 0.95 4 18 8.9 7.7e+02 0.8 3.5 1 23 479 503 479 503 0.91 5 18 0.0093 0.8 10.2 0.9 2 21 560 579 559 583 0.89 6 18 0.00016 0.014 15.8 1.6 2 23 598 620 598 620 0.96 7 18 0.27 23 5.6 1.6 1 23 634 658 634 658 0.93 8 18 7.6 6.6e+02 1.0 2.4 3 23 682 703 681 703 0.92 9 18 0.00031 0.027 14.9 0.0 1 21 708 728 708 729 0.96 10 18 7.9 6.8e+02 1.0 1.5 2 23 751 772 750 772 0.88 11 18 4.1e-05 0.0035 17.6 1.6 1 23 799 820 799 820 0.99 12 18 6.7e-06 0.00057 20.1 0.3 1 21 826 846 826 847 0.93 13 18 1.9e-05 0.0017 18.7 1.3 1 23 875 897 875 897 0.98 14 18 0.048 4.2 8.0 0.0 1 23 902 927 902 927 0.93 15 18 0.00075 0.065 13.7 3.9 1 23 936 958 936 958 0.98 16 18 0.0023 0.19 12.2 6.2 1 23 967 991 967 991 0.97 17 18 0.00088 0.076 13.4 0.6 1 21 997 1017 997 1022 0.94 18 18 0.51 44 4.7 0.6 1 23 1028 1052 1028 1052 0.92
Sequence Information
- Coding Sequence
- ATGGAGACAAActatgaggatgatgatgatactcACTATTGCATTAAATGCCACTTGACCGTTAATGGATTAGACAATTATGTACGACATCGTCAGACAGAATGTCGACCATCGGAGAGAAAGAATGCTGTAACACCCGATCCGCCAACACCCGCAGTGTCCTATCCGGAAATCCTCAATGCCGATGCATTTTTCAGTTCATTAGAGTTACAGAGCAGTGCTAAATCTAAATCAACTCTTACTCGAACTTGccatgaagaagagaaaaagttgGAAACACGTGGCGAGAGACgaagaagaacaagaagatATCAAGAGACCGATGTACCAAGTCCTAAAGAAAAGTTAATGACACTACCACCAGTTGTCACTGATTTGGATGATCCCACTGATCATATTGGTATCCCGTCTCTAGTCGGATTCCCTGACATAGTTTCTTTCACCGATAAAGCATCaacttcaacaaaaattctcaCACCAACAGTTTCCAAACCGAGTGATACTgataagaaacaaataaatgatgaacGTCGAGTTTGGTCAGACGACGATGACTCGGTTGATATTGATGGACATAAAGAGACGAATATTCCTGATGAACTGGATATTGACACACAATTCGATTATcaagatgatgatgacgatacTAACGACAGTCAATGTGATGATATTGATCAAGTTGATTTGTATTCAGAAAGTGATGAAGCTGATGATACTGAATATACACCACAGGCACACACAGGCGGTAAATGGAAACCTGGTCAATTACTTCAGCACATAACAAGacagaatgatgatgaagtcgATCATGAAGAGGATCACAATAATTTAGTATCTGTACACACTGGCGGAAAATGGAAACCAGAGAAAACTGAGGAGGATGAACCAGAGGACGATTGTAAAGATCATGATGTTAAGGATAGTGCAATAATGAGGAACAGTAACATGAGACAGCCACCCCCGGGTCACACACACGGTAAATGGATCCCGGGTGCCACGACAATGCCGTCGGAACATGGATATTGGTGCAATCCATGTGGCCGGAAACTCACGTCTAAATTGGTTTACAACCGACACTTACGTTCGGATTTGCACGCACGACGTAGTATTCAGGAGATTGAAGGTGACGTTAAATTGCCACGATCAGTCGGGCCTTTATTGCGTGAAAAATGTCGTACAAGGCGCCAACGAATTATCGAAATGACACAATCAGATACCAAAAAGCCAATAATGGATAAACCAACGAAAAAGACACGATGCAGAGAGAAAGAGTTTGTACATTGTGAAATGTGTCATGCTCGTGTGCGTCGTACTCAGTTGGGCAAACACCTGCTCTCACACTACCACTGTCGTGTCGCAGGATTAAATCCCTGCAGTACTACCTCACGACACTTTATCCTGGAGAACATGGCTAACGTGGTTCGCCAATGTCCATTTCAGTGCTCAAGTTGTCGTTTTTATTGCAATACTGAAGAAACTTTTTTGTTACATTGGCGCTCCAATCTTCATTCTCAAACTCAAAACGACAATGGaagcaaatatatttgcatgtgTTGCGACGTTTGGTGCGATGACAATGCAACGATGGAGGAGCATCTGCTCAGTTCGGAACATCGTGAAACAGTCGCAATGATTAATGGCTCAGTTCCAATTGTTATACGACGGCAACGTTTTTTAATATGCCAAAGTTGCAATCGTCGTTTCAGATATAATTTTCAGCTTCGTTTGCACGCTAAAGACAGTGGGCATCCAATAAATTACACTGCCTCagatgaatatcaaaaaaaaaattattgcaatgtgtgtccacaaattttcaaatcacaATTGGCATTGCAACGTCACCAACTAACTTGTCACAATAAATCTAAAGACTTCAAGGAGAAAATACCAAAGCCGTATTTCTGTTCGTTTTGCTCAATCAACTTTGAGACTGCACACGACGCAGTCTTACATCGAAGAACTACAAGTCACAAACAGATTGTCAAGGATCGTAAGTTTGGTTCTATCGAGGGGGAATCCGTATCACCTTCACTAAGGGATTGTGGTCATTGCGgcgaaaaacaaaacaatttgcCCGAGTACAAGCAGCATCTACTTCAATGTCATTCCGATCGATGTTACAAGTGCCAAGAGTGTGGTGAAGTTTTCGCATTATCTCAAGATATGACACAACACATAAACATGGGGAtctgtcaaaaaaaaatgccgGAAACCAATTATGAACATTTGtgcattgatgataaaaaggaATGTGACAAGTGTTCGTTTACTACAAATTCACATGCCGAGTTTATCTTCCACCAAGCTATTCATAAGGGCGCCATTGAGATTGATCCAAAACAAGCGAGTTCGAGTTCTACTAACACTACCACTACAAAAAGTTCTATCAAGTATCGGTGTCCCATTTGTGACAAAATATACACCAAGGGATCATTGCATAATCACGTTCGCCGACACACTggggaaaaattattttcatgccCCATATGTGATAAATCCTTcgcaaaaaaatcaaacatgaCCGAACATgcaaataaatgttcatttcaaACATCCCCTGCATTATCTGAATCGAACAACCacgaaaatgagaatgaagaaaatgtgcGTCGACGGAAATACATCTGTTTAGAATGCAACACAGCATTCTATACGAAAACAACTCTGAGACAGCATATGCTTCGACACACTGGGAAGAATTACAAGTGCGGACTTCCGGGCTGTCCTACCATTCTACGGAATGAAACCGAACTCAAGGCCCATCGAGCTCTTATTCATGAAAACGCAAACGACGATCGTAAATACCAATGCAATGAGTGCTCATATGCCGCAAGAACAAAAACGCAATTACGTCGGCATCACACTCGACACATGATCCCGACAATCAAACCTCAATTCGTCTGTAGTCACAAAGGCTGTAATTTTTCAAGTAGATTCAATTCACACCTGAAGCGACATATGCGTTTGCACACTGGAATAAAACCATACCAATGTCCGCACTGCGAATATGCTAGCAACAATATTGAGAACTTGCGGAAGCACGTATTATCAACAACACTTCATCCAGGTAAAACGATTTACCAATGTGAAAAGTGCCGAGATTATGGCaccaatttttcaaaacaattgcGTGCCCATTTAATGGAAGTACACTCTGAAGAATTTCCAACATCTGTCGCTATCAACAGTTATGTTGCTGAAATCTTCGGTACATAA
- Protein Sequence
- METNYEDDDDTHYCIKCHLTVNGLDNYVRHRQTECRPSERKNAVTPDPPTPAVSYPEILNADAFFSSLELQSSAKSKSTLTRTCHEEEKKLETRGERRRRTRRYQETDVPSPKEKLMTLPPVVTDLDDPTDHIGIPSLVGFPDIVSFTDKASTSTKILTPTVSKPSDTDKKQINDERRVWSDDDDSVDIDGHKETNIPDELDIDTQFDYQDDDDDTNDSQCDDIDQVDLYSESDEADDTEYTPQAHTGGKWKPGQLLQHITRQNDDEVDHEEDHNNLVSVHTGGKWKPEKTEEDEPEDDCKDHDVKDSAIMRNSNMRQPPPGHTHGKWIPGATTMPSEHGYWCNPCGRKLTSKLVYNRHLRSDLHARRSIQEIEGDVKLPRSVGPLLREKCRTRRQRIIEMTQSDTKKPIMDKPTKKTRCREKEFVHCEMCHARVRRTQLGKHLLSHYHCRVAGLNPCSTTSRHFILENMANVVRQCPFQCSSCRFYCNTEETFLLHWRSNLHSQTQNDNGSKYICMCCDVWCDDNATMEEHLLSSEHRETVAMINGSVPIVIRRQRFLICQSCNRRFRYNFQLRLHAKDSGHPINYTASDEYQKKNYCNVCPQIFKSQLALQRHQLTCHNKSKDFKEKIPKPYFCSFCSINFETAHDAVLHRRTTSHKQIVKDRKFGSIEGESVSPSLRDCGHCGEKQNNLPEYKQHLLQCHSDRCYKCQECGEVFALSQDMTQHINMGICQKKMPETNYEHLCIDDKKECDKCSFTTNSHAEFIFHQAIHKGAIEIDPKQASSSSTNTTTTKSSIKYRCPICDKIYTKGSLHNHVRRHTGEKLFSCPICDKSFAKKSNMTEHANKCSFQTSPALSESNNHENENEENVRRRKYICLECNTAFYTKTTLRQHMLRHTGKNYKCGLPGCPTILRNETELKAHRALIHENANDDRKYQCNECSYAARTKTQLRRHHTRHMIPTIKPQFVCSHKGCNFSSRFNSHLKRHMRLHTGIKPYQCPHCEYASNNIENLRKHVLSTTLHPGKTIYQCEKCRDYGTNFSKQLRAHLMEVHSEEFPTSVAINSYVAEIFGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00997275;
- 90% Identity
- iTF_00997275;
- 80% Identity
- -