Basic Information

Insect: Meteorus cinctellus
Gene Symbol: -
Assembly: GCA_030523045.1
Location: JAPYZF010000011.1:587219-590348[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.064 5.5 7.6 1.4 3 23 487 509 485 509 0.92

2 10 0.027 2.3 8.7 3.3 1 23 515 539 515 539 0.97

3 10 0.018 1.6 9.3 2.3 1 23 545 569 545 569 0.96

4 10 0.00023 0.02 15.3 0.2 2 23 576 599 575 599 0.93

5 10 0.011 0.94 10.0 3.6 1 21 606 628 606 630 0.95

6 10 0.00057 0.049 14.0 0.4 2 23 638 661 637 661 0.94

7 10 7.7e-05 0.0066 16.8 0.9 2 23 668 691 667 691 0.92

8 10 9.3e-05 0.008 16.5 1.0 1 23 697 721 697 721 0.97

9 10 6.7e-05 0.0057 17.0 1.1 1 23 727 749 727 749 0.99

10 10 0.0021 0.18 12.2 1.1 1 23 821 846 821 846 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.064	5.5	7.6	1.4	3	23	487	509	485	509	0.92
2	10	0.027	2.3	8.7	3.3	1	23	515	539	515	539	0.97
3	10	0.018	1.6	9.3	2.3	1	23	545	569	545	569	0.96
4	10	0.00023	0.02	15.3	0.2	2	23	576	599	575	599	0.93
5	10	0.011	0.94	10.0	3.6	1	21	606	628	606	630	0.95
6	10	0.00057	0.049	14.0	0.4	2	23	638	661	637	661	0.94
7	10	7.7e-05	0.0066	16.8	0.9	2	23	668	691	667	691	0.92
8	10	9.3e-05	0.008	16.5	1.0	1	23	697	721	697	721	0.97
9	10	6.7e-05	0.0057	17.0	1.1	1	23	727	749	727	749	0.99
10	10	0.0021	0.18	12.2	1.1	1	23	821	846	821	846	0.94

Sequence Information

Coding Sequence: ATGTCTGgagaaaacaatttaaatagtaatagaattgaaacaaaacgTATATCGCAAATATACGGATATCGTCGAAGTGGCCAATCAGGAGATATTTCGATTGCAGACTGTGACAATGTCGGAAATTGTGAGTATGAGGTTACAACATCAACAACTGCAATATCTCCTTTGGATGAAAGTTTAATGGCTAATGTTAAGCCGCGAGAAGTATGGAGGAAAAAACAATGTGAAAATGATGGTAGTGATGCATCATCACGTTCGTGGAATACATATTACCAGTTGATCAATGGTGTATCTGTAACAACCatacaaaatgatgataacTGTGAAGGTGAAACAGACGCTGGAGTCGCGGAAGATATTGAGAAATGGTTGAAAGCACGAAGTGAATCGATTTCAAGTATAGAAATGGATCCAACTAAGTCAGAAGCCGATGAAGTAACCGTGAATGGTTATCATCTTGGGCACGCTCTGTCACACGAATTTTTAGACAAGGACCCTGATGTTTTATCCATTGACATTGATTTATCTGACAAAAAAATGGCTCTCGGGTATGATCCAATTTTGCAAGATTTACAGAGCGATAAGTTACTCGATGTGTGCGAAAAAGATGGATTTATACTGCCGGAATTTCATCTCGATCAACTGGATTCATTGGCACTTACGCCAAATGATATGATGGTGGCTGGTGAAGTTTTACCGTCAACCATCCATCATCCTGACAGAAGTTTGAGTATCGATAGTTCACAAGAGTTCTCTGAAAAAGTGGGTAGTCAAAGGGAATCGACTCATGCTGACGATATTTGTGATAAATCAACTCAAgtgaatgtttataatttccaTGAACATTTCGATGAGTCAAATTTGAAGGGATCAACGAATTTATCGTTACGGAATGACAATTTGAATAACTTCAATGATGAAGTTCCAGTTGATTTGGATAATATACGTACGATTGACACTACAGCTCCAATGATTCTTCCCCAAGTTCAAGTTGCATCTTTTATTGAACGCGGCTTGAAATCCAAACCCAAATTGAAGCCGAGTATAATGACGAAAAAACAACGAAATGTACCTGATATAATAGTGAGTAATGATAATGCCAATAatggaaatgaagaattacAGACTGAGCCGAATGATGGGATAATGGCTGTCGTTGCTATATCAACGGACAAACGTTCGAACATGACACAAATTGTGATAAACACTGGAAAAGGCGAACAAATTTATCAGGGAAAAACATCCGAACTGATGGAGGCAACAGGATATTTTCCAAAGTACTCCAAATCGAGTAATTTCACCTCCGCTACTTGGAAAAATACACCGGACAGCAATATAGATAATGACACGTTGTTGAACAATCAGGAGTTAGTTATAACAAATGCATTGCATGAGTTGGGTTACAGCGAAGAACGCTTATTATCTGGCGTACGCCCAGAAAATGGCGCTTGGATTTGTCCACGTGAAGATTGCCACCGAGAATTTAATCGTTTGTACGCATTAAAATGTCATTTACTTGCTCATTCTGGGGTTCGACCGTTCAAGTGCGACTATGAAAGCTGTAACTGGGCATTTCATTCGGAATTTAAATTGAAGCGCCACAAAGAGACTCATTTGAAGCGCAAAGATTATGTTTGTCAATTCCCAGGATGCTGTCGACGTTTCACAACTATTTACAATTTGTGGACTCATCAAAAATTACATACACGACCCAATAGAATAACATGCCAAGTACCGGGATgcgatgaaaaatttcaaacacgACGTGCACTTGAATTACACATGAAAACACATGATCAAAGTCATGCACCTTATGTGTGCCCACACGAAGGTTGCAATAAACGCTATTTCAGTAGTAATGCTCTAACATCACATCAAAGATGCCATAGTTATAAAGAAGTTGATATTACATGTTCGTGGCCAGGGTGTGGAAAAGTATACGATAAACCATGCAGGTTGAAGGCACACTTACGGTCGCATACAGGATCAAAACCGTATTTATGTACTTTTCCAGGATGTCAATGGGCATTCTCATCGTCTAGCAAATTAAAGaggcatgaaaaaaaacacacaaacgAGAGAAAATTCGTTTGCGATATTAATGGTTGCAGTAAGGCATTTATGCGTTCAGAACATTTGAGAGAACATCGATTGACACATAATGAAGGACGTTTTTTTCAATGCTATATGTGTGATGCACGTTTCTCCGCTAAAAGCAGTCTATATGTCCATATAAAGAAACATCAGACGAACATAGATCATGATGATCATACGAATACAAATTTAATCAGCATATCCACCAACAATGTTCAGTCTTTAGTCccgaattcaaattttactgTTAAAAATGATGTCATTGGCATACCtgacaattttcaatacaaaaagaaaactgaATTGGTAAATAAAGATCGATCAAAGTTATCAACGAACGAAATATCGACACCAAAACCAAAATTCAACTGTTCTGTTGATGGATGTTCGAAATCATATATGACAAAAGCATCTTTGAGAACGCATACGCTCAGGTTTCATACGAAACCCACAGAAAAATCTACAGTTTTCCCTGCTTCTGATatggattatatatttttaaccaGTGAGAGTGAAACGATTGAAGCGGCAAATGAAATAACTACAGTTGAGACGAATGATGCTGCAATAATTAACTCATCTTCAGTGATAACGGCATGTTTACCTGAACCTGAACCACCGCCTCCAATGGCTGTTAGAAAAGCACACTCGCCACTTCTCAATGAGATTGAACATTATCGTGTGAGAAAGAGTTGTGGATCAGCGAGGACGGGATTGACGTGCTCCGACGTATGGAAATTGAAAACTAAGAATAATATCACACTAAATTCACTGGTAACACCATCAGACATTGTTCTTAGTACAGCAGACTTGGGTGAAGATTTGTTACTGACAGAAGAATTACCGTCAATGTATTATCAGGATGACATTGTTGGTACTGAGTGTCAGATTTTACTACTTGACACAACATCGTCTGAGAGCACAATCAATTTACGTGATCTAGAGTGA
Protein Sequence: MSGENNLNSNRIETKRISQIYGYRRSGQSGDISIADCDNVGNCEYEVTTSTTAISPLDESLMANVKPREVWRKKQCENDGSDASSRSWNTYYQLINGVSVTTIQNDDNCEGETDAGVAEDIEKWLKARSESISSIEMDPTKSEADEVTVNGYHLGHALSHEFLDKDPDVLSIDIDLSDKKMALGYDPILQDLQSDKLLDVCEKDGFILPEFHLDQLDSLALTPNDMMVAGEVLPSTIHHPDRSLSIDSSQEFSEKVGSQRESTHADDICDKSTQVNVYNFHEHFDESNLKGSTNLSLRNDNLNNFNDEVPVDLDNIRTIDTTAPMILPQVQVASFIERGLKSKPKLKPSIMTKKQRNVPDIIVSNDNANNGNEELQTEPNDGIMAVVAISTDKRSNMTQIVINTGKGEQIYQGKTSELMEATGYFPKYSKSSNFTSATWKNTPDSNIDNDTLLNNQELVITNALHELGYSEERLLSGVRPENGAWICPREDCHREFNRLYALKCHLLAHSGVRPFKCDYESCNWAFHSEFKLKRHKETHLKRKDYVCQFPGCCRRFTTIYNLWTHQKLHTRPNRITCQVPGCDEKFQTRRALELHMKTHDQSHAPYVCPHEGCNKRYFSSNALTSHQRCHSYKEVDITCSWPGCGKVYDKPCRLKAHLRSHTGSKPYLCTFPGCQWAFSSSSKLKRHEKKHTNERKFVCDINGCSKAFMRSEHLREHRLTHNEGRFFQCYMCDARFSAKSSLYVHIKKHQTNIDHDDHTNTNLISISTNNVQSLVPNSNFTVKNDVIGIPDNFQYKKKTELVNKDRSKLSTNEISTPKPKFNCSVDGCSKSYMTKASLRTHTLRFHTKPTEKSTVFPASDMDYIFLTSESETIEAANEITTVETNDAAIINSSSVITACLPEPEPPPPMAVRKAHSPLLNEIEHYRVRKSCGSARTGLTCSDVWKLKTKNNITLNSLVTPSDIVLSTADLGEDLLLTEELPSMYYQDDIVGTECQILLLDTTSSESTINLRDLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00997272;
90% Identity: iTF_00997272;
80% Identity: -