Basic Information

Insect: Meteorus cinctellus
Gene Symbol: prdm10
Assembly: GCA_030523045.1
Location: JAPYZF010000127.1:213087-217079[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00067 0.058 13.8 2.4 2 23 487 508 486 508 0.96

2 14 1e-08 8.6e-07 29.0 1.7 1 23 546 568 546 568 0.99

3 14 0.0019 0.16 12.4 2.0 1 23 576 599 576 599 0.97

4 14 0.018 1.6 9.3 1.5 2 23 617 638 616 638 0.96

5 14 0.0066 0.57 10.7 0.7 3 23 654 674 653 674 0.97

6 14 0.00082 0.07 13.5 3.9 1 23 692 714 692 714 0.97

7 14 0.0053 0.46 11.0 1.8 2 23 723 744 722 744 0.96

8 14 0.0063 0.54 10.7 0.2 1 23 751 773 751 773 0.98

9 14 9.5e-05 0.0082 16.5 4.1 1 23 780 802 780 803 0.96

10 14 0.0034 0.29 11.6 3.0 1 23 808 830 808 830 0.98

11 14 9.7e-05 0.0083 16.5 4.7 1 23 836 859 836 859 0.96

12 14 0.0015 0.13 12.7 1.7 1 23 896 919 896 919 0.97

13 14 0.00012 0.01 16.2 2.4 1 23 941 964 941 964 0.97

14 14 0.0014 0.12 12.8 3.4 2 23 1001 1023 1000 1023 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00067	0.058	13.8	2.4	2	23	487	508	486	508	0.96
2	14	1e-08	8.6e-07	29.0	1.7	1	23	546	568	546	568	0.99
3	14	0.0019	0.16	12.4	2.0	1	23	576	599	576	599	0.97
4	14	0.018	1.6	9.3	1.5	2	23	617	638	616	638	0.96
5	14	0.0066	0.57	10.7	0.7	3	23	654	674	653	674	0.97
6	14	0.00082	0.07	13.5	3.9	1	23	692	714	692	714	0.97
7	14	0.0053	0.46	11.0	1.8	2	23	723	744	722	744	0.96
8	14	0.0063	0.54	10.7	0.2	1	23	751	773	751	773	0.98
9	14	9.5e-05	0.0082	16.5	4.1	1	23	780	802	780	803	0.96
10	14	0.0034	0.29	11.6	3.0	1	23	808	830	808	830	0.98
11	14	9.7e-05	0.0083	16.5	4.7	1	23	836	859	836	859	0.96
12	14	0.0015	0.13	12.7	1.7	1	23	896	919	896	919	0.97
13	14	0.00012	0.01	16.2	2.4	1	23	941	964	941	964	0.97
14	14	0.0014	0.12	12.8	3.4	2	23	1001	1023	1000	1023	0.96

Sequence Information

Coding Sequence: ATGGACTCGAGGGGCCCTCAAGATGCAGGGGCCCCTAGTGACCCAATGGATCCCCTTTTTATGAGCCACAGTGGTAATGCATcgtcaaaaaataataatcgtctGTTTTTTCTAACGGTTGAATACATTGAAGATCAATCGCGTGattatacaaaaatgtttctaCCCTATGAACAAGTGTCCTTTTCTCCCAGAGCTGCCTCACCTCTATCAGATTTTGAACATCGTGTGAGTCCACTCGATCCAAATATGAGTTCAGCTGCGCGGTATTCCCCAACACCGGTCCAACTGCCATCGGTGCCCTTTCCAAATTCCGTTGTTGTCCTTCAGGGTCCACCATCACCATTAATAACACCAACAGAAACCAATCCGCaatcaaatgtaaattatgTTCCGACACCGAACAATAGCGTACCACCGATTGTTACACAAACAGATAACGTCACGGATTTTGTTAATAACACAAGTGAAGAAGGATTGGTGACGAGCGTTGGgggtgaattaattttaatgcaaGGCGCGAATGCTGAATTGAGTGCATCGAATGCTCCATTGATGCTTACAAATATCCCTGGAACAGAATTTGCATTGACGAGAGATTTTCTGGTTATGCATGATGAACAATTGAGTATGATGAGTACATTAGCAAATCAAAATTCAGAGATGATTGAGGAGCAAGTGGCTATGGTTGATACGAATAATCAAACGTCACAACAAACAGATGACAAGAGGTCAAATGAGCCTTGTCAAGAAGAGATTACAAGTAGCGAAATGCCAGAGGAAAtcttaaataattatgataattctaTCGAGAATTCTGATACTGTTACTGCGGCACCTGTGAAAACTGATTTACGGCGATCAAAACGaaagataaatgataaaacgTCTGGCTGCGAGGAATGCGATGCAGTTTGCTCCAAAGCTGATGAGTGTTTGTGCCATAAAGTCTGCACGATAGCCGATCAGCCTGTACCATCGCGTGCAGTTGCAACACTGCCAGGATCATATcttacattgaataaattaccAGCCGCTAATGGTGTTACTACTGGACAATCGAATTATGGTGTATATGCCAAACGTAATATACGTCGTCGGACACAATTTGGTCCCATCGAAGGTATACTAAGTCCTTACGATGGGAAATTATTTGAGAACATTTTACCATTACTTTATGAAACCAGTGATGAACAATTGCTAGAAATTGATGTatcgaatgaaaatacttCGAACTGGATGCGGTTTGTCAGGCCAGcacaaaattatgatgaacaaaatttagTAATTTGTCAACAAAACGATGGAATTTTCTTCCTGACGACGCGTGATATTGTACcgaaagaagaattgaaagcGGGACCCAGTCCAGAGTATGCAAACAAGCGGAATCTGACGATTTTACAACCAGATCTGAAAGAGAAGGATGTggcaataaataaagataactGGGCATGGCCGTGTTACGAATGTTCACAACGTTTTCCAACATGTCAGAAGCTGCAGAAGCATTTACAAACTCACAATAATTCGAATCAATTGAATGGGAACAACAATAAAACACGTAATAAAAGGCGGAAAATGACAGTAACGACaagtaaattattgaaagttgTCGACGGTCAGACATTACTTTATACATGTCCACATTGTCCAAAAGTATTTCCACGAAGTTATAGCCTAAAACGCCACATGTTGATGCACCCAGGATCAAAAACACCGCGTTACGAGTGTACAACGTGTGGCGAGAACTTCTTGCATCCGTACAATCGAAATcgacacataaaaatatttcacagcGAAGAAACtcgtgaaaaagaaaatacattacaaaatggaaatgaatggaaatgttCGACGTGCAGTTTATCATTTGGTAAATCATGTTTATTAAACATTCATACATTGGTGCATGGTGAAGGTGCTGGTGTCATGAATGAGCATAGTGAATCATCTGCGTGTCCGCAATGCGGCACGGAATTGAAATCACATCGTGATCTCATTAATCATGTAACAAAACATGGCCGAATGAAATTACCAAAAACAACGAAACTATCTGCTGCTGTATCGTCACACAAATGTACAATGTGTTATAAACGATTTGCAACAAAGGTCCGTTTACAACAACATTATTTAGTACATGGTGCGGAGGATAAGAAGCCACTGCCATGTAATGTTTGTTTTAAGAGATTCATGAACAATTCAGCCTTAGCATGTCATTTGAAAACTCATCGACAAGacaaacaaatattcgaaTGTCCGATGTGTCGACAGTTATTCAATCAAGTTCTTATGTTAAAAGACCATATTGAAACGCATAAAAATCCGGATGAGACATTTACATGTCCACATTGCCCGCGAACTTTCACCAAATATTCAGTGATAAGAAAGCATATCAGAGCTCATCATTGTGAACGCAAACACAAATGTCAATTTTGCGTTAAACGTTTTCCGACCATCGATAAATTACGAATGCATTTATTACGTCATTCAGATCATCGAGAATTTCATTGTGCGAATTGCGAAAAGCGATTTAAACGAAAAGATAAACTTAAGGAGCACATGACGCGAATGCACAATCCTCAAAGAATCAAACGggagcaacaacagcaaccaAATCAAAATGACAATCAAGCAAAGAAATTTATACCAAAAGTCAATCCCTCGGATtacaattgttttgtttacaAGTGTCATCAGTGTCTGGTGGGCTTCAAGAGACGTGGGATGTTAGTGAATCATTTGGCTAAACGACACCCAGATGTTTCCCCGGATTCCGTGCCGGAGTTGAATATGCCGATATTACGACAGACGCGcgattattattgtcaatattGCGAAAAAGTTTACAAGAGTAGCAGTAAGAGGAAAGCCCATATCATGAAGAATCATCCGGGTGCGGCATTACCACCAAGCAATCGACAGAAAGAAACTGATGTTTCTGGTTTGCCAAATCCGACTTTTAGCCAGACTGTTGGTAGTATTACAACGAGTCCCCAAAGTTGTCAATGGTGTCATAAACAATATGCCAGTAAGgcCAAGCTATTGCAGCATCAACGTAAAAAACATCCTACATTGATGGAACCGGCGGACCAAATACCACGACCACGAAATCGCCCCCCACAAAATCAATCCCCACCGTTAAATGACAATAACTTCATTATTCCCGATTACTTACCAGCGTATGACATCAGCgctgaaatattaaaatctaaaattattaaaatatcagaCGATGTGGATTTGATCACACATGGCCTTGAAATTGTTGGCCAACAATTTGTGAGAATCCGCGACATACGTTGA
Protein Sequence: MDSRGPQDAGAPSDPMDPLFMSHSGNASSKNNNRLFFLTVEYIEDQSRDYTKMFLPYEQVSFSPRAASPLSDFEHRVSPLDPNMSSAARYSPTPVQLPSVPFPNSVVVLQGPPSPLITPTETNPQSNVNYVPTPNNSVPPIVTQTDNVTDFVNNTSEEGLVTSVGGELILMQGANAELSASNAPLMLTNIPGTEFALTRDFLVMHDEQLSMMSTLANQNSEMIEEQVAMVDTNNQTSQQTDDKRSNEPCQEEITSSEMPEEILNNYDNSIENSDTVTAAPVKTDLRRSKRKINDKTSGCEECDAVCSKADECLCHKVCTIADQPVPSRAVATLPGSYLTLNKLPAANGVTTGQSNYGVYAKRNIRRRTQFGPIEGILSPYDGKLFENILPLLYETSDEQLLEIDVSNENTSNWMRFVRPAQNYDEQNLVICQQNDGIFFLTTRDIVPKEELKAGPSPEYANKRNLTILQPDLKEKDVAINKDNWAWPCYECSQRFPTCQKLQKHLQTHNNSNQLNGNNNKTRNKRRKMTVTTSKLLKVVDGQTLLYTCPHCPKVFPRSYSLKRHMLMHPGSKTPRYECTTCGENFLHPYNRNRHIKIFHSEETREKENTLQNGNEWKCSTCSLSFGKSCLLNIHTLVHGEGAGVMNEHSESSACPQCGTELKSHRDLINHVTKHGRMKLPKTTKLSAAVSSHKCTMCYKRFATKVRLQQHYLVHGAEDKKPLPCNVCFKRFMNNSALACHLKTHRQDKQIFECPMCRQLFNQVLMLKDHIETHKNPDETFTCPHCPRTFTKYSVIRKHIRAHHCERKHKCQFCVKRFPTIDKLRMHLLRHSDHREFHCANCEKRFKRKDKLKEHMTRMHNPQRIKREQQQQPNQNDNQAKKFIPKVNPSDYNCFVYKCHQCLVGFKRRGMLVNHLAKRHPDVSPDSVPELNMPILRQTRDYYCQYCEKVYKSSSKRKAHIMKNHPGAALPPSNRQKETDVSGLPNPTFSQTVGSITTSPQSCQWCHKQYASKAKLLQHQRKKHPTLMEPADQIPRPRNRPPQNQSPPLNDNNFIIPDYLPAYDISAEILKSKIIKISDDVDLITHGLEIVGQQFVRIRDIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00997234;
90% Identity: iTF_00997234;
80% Identity: -