Basic Information

Insect: Meteorus cinctellus
Gene Symbol: gtf3a
Assembly: GCA_030523045.1
Location: JAPYZF010000064.1:49805-54124[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0034 0.29 11.6 0.1 3 23 686 706 684 706 0.96

2 17 0.073 6.3 7.4 0.5 1 21 712 732 712 733 0.91

3 17 0.81 70 4.1 1.2 2 23 739 760 738 760 0.95

4 17 4e-05 0.0034 17.7 1.2 3 23 769 790 768 790 0.98

5 17 0.0033 0.28 11.6 2.1 1 23 797 820 797 820 0.95

6 17 8.1e-05 0.007 16.7 0.7 1 23 826 849 826 849 0.94

7 17 0.55 47 4.6 0.9 2 23 857 877 857 877 0.94

8 17 2.1e-06 0.00018 21.7 1.7 2 23 883 904 882 904 0.97

9 17 1.9e-06 0.00016 21.8 0.2 1 23 910 932 910 932 0.99

10 17 0.0037 0.32 11.5 2.8 2 23 944 966 943 966 0.95

11 17 0.43 37 5.0 1.2 1 23 972 995 972 995 0.92

12 17 0.0014 0.12 12.8 2.6 2 23 1017 1039 1016 1039 0.95

13 17 0.0013 0.11 13.0 1.0 2 23 1046 1068 1045 1068 0.97

14 17 3.5e-05 0.003 17.9 1.7 2 23 1076 1097 1075 1097 0.97

15 17 0.001 0.089 13.2 2.3 1 23 1103 1126 1103 1126 0.96

16 17 1.5 1.3e+02 3.3 3.4 2 23 1133 1154 1132 1154 0.96

17 17 0.0029 0.25 11.8 2.9 1 23 1160 1182 1160 1182 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0034	0.29	11.6	0.1	3	23	686	706	684	706	0.96
2	17	0.073	6.3	7.4	0.5	1	21	712	732	712	733	0.91
3	17	0.81	70	4.1	1.2	2	23	739	760	738	760	0.95
4	17	4e-05	0.0034	17.7	1.2	3	23	769	790	768	790	0.98
5	17	0.0033	0.28	11.6	2.1	1	23	797	820	797	820	0.95
6	17	8.1e-05	0.007	16.7	0.7	1	23	826	849	826	849	0.94
7	17	0.55	47	4.6	0.9	2	23	857	877	857	877	0.94
8	17	2.1e-06	0.00018	21.7	1.7	2	23	883	904	882	904	0.97
9	17	1.9e-06	0.00016	21.8	0.2	1	23	910	932	910	932	0.99
10	17	0.0037	0.32	11.5	2.8	2	23	944	966	943	966	0.95
11	17	0.43	37	5.0	1.2	1	23	972	995	972	995	0.92
12	17	0.0014	0.12	12.8	2.6	2	23	1017	1039	1016	1039	0.95
13	17	0.0013	0.11	13.0	1.0	2	23	1046	1068	1045	1068	0.97
14	17	3.5e-05	0.003	17.9	1.7	2	23	1076	1097	1075	1097	0.97
15	17	0.001	0.089	13.2	2.3	1	23	1103	1126	1103	1126	0.96
16	17	1.5	1.3e+02	3.3	3.4	2	23	1133	1154	1132	1154	0.96
17	17	0.0029	0.25	11.8	2.9	1	23	1160	1182	1160	1182	0.98

Sequence Information

Coding Sequence: ATgtctatgaaaaataaaagcaattgCGTGAATCAGGTTAAAACTattaatgatttaaaaaaGGTAATCCCGAGAGTAAAAATTTTGGGAGCCAAAGTAAATACTCTAGAAAAATTAACGCAAGTtgattgcaataataaatttaatactaTGGACAGTGGAACATCAATCGCAACTCACTTCTCTAAGGAGAAATTAAGCAATTATTGCCGTACATGCGCGGGGTTGAAAATACCGTTAGTAGATATATTCGGCGATAAAGGCATTCAAATGCGATTGAATCAACAAATGAAACACTTGGAGAACATAGATAAATATGATAGCTTGTCAACACAGATGTGTATGGACTGTATCTGTGATTTAAAAATGAgctacaaatttttcatgcaaataaaaaaggcTGAAGTGAAATTGAAGTCTATACATGCATCAATGAATGCGGCCGCATATGTACGAGTAATAGATGATCAATGTGAAATAGAACCTGGAGAAAATTCGACAAATTCCcaagaattgaatgattcaTGGAAGGTTTCAATGAATCATTCGCAATTGTCATCGCCGAAgccaattgatgaaaatccaAAATCAGCCGATGACCATAGCGACTGTATATCGGAAGAAGATACGAATAgaacaataaatgatgaagagaacTTGAAAAATAACAGTAACGATGATGCGGAATCGATTGAAGAGTTTGATCCCGATGATCCGCCCTTTGATTCAGCTGAGTTCGCGAATTCTATCACAGAATGTGAGATTGATActgataaagataaaaatgtcgAGAATAAACAATTGGCCGATGATGAAAGTATCACTGTGAATTGCTCAAATACCGTGGAAAATGAGGTGGTGAACGATAATATATTAATGGAAAACATGGGAGATGATAAATCTAACgagtataatataaatatcgatAGTTGTATTAAAATAGAACATAATGACATAATACATGATTCATGTTTGGACTCGcatacaaaaattaaagaaaGTGATTTCGCTAGAGAAACTATCAAGCAGCCGAATATATTGAAGAGGAAGGCTTCGTGGCATGGTAAACCTGCCAGTTTTCTAAATACCCCAGATTCAAAAGCGACGGAAGCCAAAGTTCATAAGTTAAATACAGTCAACATATCTCCTTCAGATGAAGAAGGAATAATGTATGTGACTGTAAAAGGATCAAAACCAAATGAATTGCTCCTAgtgaaagttaaaaaaatggataagtgctacgagaaaaaaaatgaaaagagtcCAATTGCAAGAACCAATGATGTTAAATTCATGGAGAAATCTTCCAAAATGTTGCCATTAAGAGATGTATATTGTGATCGgtcgaaaaaatttgaaaatcgCGAAGCAATTATCGAAGAACAAATTGAGCAATACAAGAAGAAGCGTGAGAAGGTGCTCGGAGGCGGTACTGGTGTCAATACTGCTGCTATAATTAATGCTACTGATAATGCTGATGCCGTTGCAGCGGTGAATacgaatgaaacaattgaactCGATCATAgcacattgaattttattaatttacggcacactttaaataattcatcatttggaAATACTGTATCATCGGAAGAACAGTCTACGGTACAAAGTGATAATCAAACCGAAAATATACAACTGGGAAAGGAATTCCATATTaaggaagagaatgaaagtgATGCTCCGGAGAATGACCCAACTCACAATAGTGATCACAAAAATACCAAAGAGTATTTAGCGCGATTGGCggttattaaacaaaaatgggAGGAGGCTAAGTTGAAGAAAGAACTACTTCAGAAAGAACTCGATGAATCATATACGGAAGGAaatcttgaaaaattatctaGAATACtgggggaaaaagaaaagaatttacaAGAATTTCAGGAATATCTcaagcaaagaaaaattgttataacaCGATTGAAAGATGAGgatattatatcattatatgAGGATCGTAATGTTACAACAATGCATAATAAATTACCAGATTTAATAGATGAGAAACCTACATTGAATAGCATCGGTGGTACTGATTTTTTAGATTGTGATTATTGCCCACAAGTATTTCTTACTCGTGGCACACTTGAGGAGCATTTGAAGAGCCATGACTACAAAATTTCCTATTTTTGTGAAGATTGTGGTAATGAATTTCCTAGTAACAAATCGCGACGAACACATAATATGACATgtttgaagaaattgatatgCAAGTACTGTGACTTTATGTTGGAATCAAGAGGAAAAAAGCGTCAACATGAGCAGAAGCATTGCGATACTATATACGGGCAGCTTTGCGACATCTGCGGTGAAAAATTCAAGCACCAGGGCACTTTAGATcaacatataaaaacacaACATATGAGCTGGGAGAAGGTTTTTCAATGTCCAAAATGCCCGAAGAAATTCgcatttaaacaaaaattgagttTTCACTTGAAGTCTGTTCATACAACATTGAGGGCATATCTATGTGAAGATTGTGGAGCCGATTTTAAAAACCCAGCATCACTCAGACATCATCGGATTCGCAAACATCAGCCGACTAGTAATAAACGCGAGTGCCCAGTTTGCCATAAACTCGTTCCATTTTATAGCCTCTCCAAGCACATGTACACCCACAAAGCCTACACGATCGAATGTCCTCActgtgaaaaaatgttcaaaaataCATCGACATTGAAGCAACATGTGAGAATACACGAGGATCAGCGCCAATATCGTTGCGATACATGTGGTGTCGGGTTTAACCGTCGCGATGGATTGCGTTTACACATGAGAGTTCATGAAAAGTCTGATAGTCGTGCACTCAAAGAGTGTTCGTGTCAAATATGCTCTGAAAAATTTCCCAATCATTCCATGCTGGTAATCCACCGTAATAGGGTACACAAGGATGGTAGACAGTATACTTGTCAAATTTGCAATAGATCTATGCTATCCACTAGATCGTTAGAATGGCACATGTCACATATTCATAATGAAGCGCCCGCGGGAATCGGACAGGATGATTCGGAAACCGCCGTCGAGATGAAGAGGGTATCTTGCAATCATTGCGATAAAACATTCAAGACCGAAATGATTCTGCGAACACATATCAAAAATACACATATGGAAAAAAACCCAGTTAAATGTTTGGATTGTGATCTAATGTTTACATCGGAAGTTCGAATGCGACATCATATGATGACAATTCATAATCGATTAGAAGGTACGCTAACGTGTCCGCATTGTCCAAAGCGTTTTGTGAATCAACTGCGACTCAAAACTCACATGATTTCACACTCCGAGGATAGACCCTACACGTGTGAGATATGCGGTTTCAATttgaaaacgaaaattcaattgataaaacatcATCAGAATAGACACAGTGATGAGCGACCTCTCCAATGTCGTTTTTGTCCATGGCGATGCAAACAAGTTAGCGCGTTAGTTTGTCATGAGAGAACGCACACAAATGAAAGGCCTTATTCGTGTTCTGAATGTAAACAACGTTTTAAATATCTCGgtgataaaaacaaacatgaaAGAAGACATGAAAGTCTCGGTGGCTCCGGATTCAAGAGAATTGTTTCTGGACGCAATGTCAAACAACCAAAAAACCAGGATGGTGAAGTTTCAGCTTCGGAGCATGAACATCTTGAACATGATTACGAGACCGTCGATGATCACTCAAATGAACATGCTCagtatgatataaaatatgatgaagagCAGCAGATTGTTGAGTTTGAAGCACAGGAAATTGACGATGAAGTACGAAAGTCAATGCCAAAACATCAACAAGAGTTTCAACAATACCATGAACGAGAGATTGATGAAGAggacgatgatgaagaagacgaggaagaagaagatgaagatgatgaagagcCTGATGATTATGAAGATGAGGAAGATGAAGAGGAGAGAGCGATTGAGTCGAAGATGGAAATGGAAATGGAAATGGAGCAGCAAAGACGAGACAAAGGTGAGGCAGACGTCGATGATGTAGAATACAAACCAGTTTATCGTCATGAATATGAAGCGATTTCAAAAGAAGCCACTGAAGCTGCTGAAGTTATTATGAGTATGGAAGATGCGACAGTTTATACTGAAGAGGTGACTGCagataatatagaaaatgtaGAAATGATGACTGCAGAAATGATTAACAATCAGATTCTGCAAAGTGGAACAGTGGTGCATATAGAGCAACAGTATGATGATGGGAAAATTCAAGTGATTCCTGTTATGTTAACGTTGCCTGACTTAACAGATTCGACATCTGACATGAACTTGGCTTCTGGATCAATAATGTACAATAATTAG
Protein Sequence: MSMKNKSNCVNQVKTINDLKKVIPRVKILGAKVNTLEKLTQVDCNNKFNTMDSGTSIATHFSKEKLSNYCRTCAGLKIPLVDIFGDKGIQMRLNQQMKHLENIDKYDSLSTQMCMDCICDLKMSYKFFMQIKKAEVKLKSIHASMNAAAYVRVIDDQCEIEPGENSTNSQELNDSWKVSMNHSQLSSPKPIDENPKSADDHSDCISEEDTNRTINDEENLKNNSNDDAESIEEFDPDDPPFDSAEFANSITECEIDTDKDKNVENKQLADDESITVNCSNTVENEVVNDNILMENMGDDKSNEYNINIDSCIKIEHNDIIHDSCLDSHTKIKESDFARETIKQPNILKRKASWHGKPASFLNTPDSKATEAKVHKLNTVNISPSDEEGIMYVTVKGSKPNELLLVKVKKMDKCYEKKNEKSPIARTNDVKFMEKSSKMLPLRDVYCDRSKKFENREAIIEEQIEQYKKKREKVLGGGTGVNTAAIINATDNADAVAAVNTNETIELDHSTLNFINLRHTLNNSSFGNTVSSEEQSTVQSDNQTENIQLGKEFHIKEENESDAPENDPTHNSDHKNTKEYLARLAVIKQKWEEAKLKKELLQKELDESYTEGNLEKLSRILGEKEKNLQEFQEYLKQRKIVITRLKDEDIISLYEDRNVTTMHNKLPDLIDEKPTLNSIGGTDFLDCDYCPQVFLTRGTLEEHLKSHDYKISYFCEDCGNEFPSNKSRRTHNMTCLKKLICKYCDFMLESRGKKRQHEQKHCDTIYGQLCDICGEKFKHQGTLDQHIKTQHMSWEKVFQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPTSNKRECPVCHKLVPFYSLSKHMYTHKAYTIECPHCEKMFKNTSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHEKSDSRALKECSCQICSEKFPNHSMLVIHRNRVHKDGRQYTCQICNRSMLSTRSLEWHMSHIHNEAPAGIGQDDSETAVEMKRVSCNHCDKTFKTEMILRTHIKNTHMEKNPVKCLDCDLMFTSEVRMRHHMMTIHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRFCPWRCKQVSALVCHERTHTNERPYSCSECKQRFKYLGDKNKHERRHESLGGSGFKRIVSGRNVKQPKNQDGEVSASEHEHLEHDYETVDDHSNEHAQYDIKYDEEQQIVEFEAQEIDDEVRKSMPKHQQEFQQYHEREIDEEDDDEEDEEEEDEDDEEPDDYEDEEDEEERAIESKMEMEMEMEQQRRDKGEADVDDVEYKPVYRHEYEAISKEATEAAEVIMSMEDATVYTEEVTADNIENVEMMTAEMINNQILQSGTVVHIEQQYDDGKIQVIPVMLTLPDLTDSTSDMNLASGSIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00997222;
90% Identity: iTF_00997222;
80% Identity: -