Mcin002059.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Meteorus cinctellus
Gene Symbol
-
Assembly
GCA_030523045.1
Location
JAPYZF010000036.1:147973-158248[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 6e-06 0.00052 20.3 1.0 1 23 226 248 226 248 0.98
2 31 0.0026 0.22 12.0 1.9 1 23 271 294 271 294 0.96
3 31 0.00031 0.027 14.9 1.0 2 23 301 323 300 323 0.96
4 31 0.00033 0.029 14.8 0.5 1 21 343 363 343 364 0.95
5 31 0.0027 0.23 11.9 0.1 2 23 468 489 467 489 0.93
6 31 0.012 1 9.9 0.2 1 23 495 518 495 518 0.93
7 31 0.00011 0.0098 16.2 0.1 1 23 588 611 588 611 0.96
8 31 0.0069 0.6 10.6 0.5 1 23 617 640 617 640 0.96
9 31 0.14 12 6.5 1.9 1 23 653 675 653 675 0.97
10 31 3.9e-05 0.0034 17.7 1.1 3 23 723 744 722 744 0.96
11 31 4.5 3.8e+02 1.8 0.3 1 23 774 797 774 797 0.82
12 31 0.4 34 5.1 0.8 2 23 804 827 803 827 0.93
13 31 3 2.6e+02 2.3 0.0 2 23 836 858 836 858 0.84
14 31 0.045 3.9 8.1 0.1 2 23 865 887 864 887 0.95
15 31 1.2e-05 0.0011 19.3 1.2 1 23 895 917 895 917 0.98
16 31 1.4 1.2e+02 3.4 0.5 3 23 953 975 951 975 0.84
17 31 0.0002 0.017 15.5 3.3 1 23 978 1001 978 1001 0.97
18 31 0.0047 0.41 11.1 0.5 2 23 1008 1030 1007 1030 0.95
19 31 0.0014 0.12 12.8 4.0 1 21 1059 1079 1059 1080 0.95
20 31 0.0026 0.22 12.0 1.8 2 23 1094 1115 1093 1116 0.93
21 31 0.13 11 6.7 1.1 1 23 1119 1142 1119 1142 0.95
22 31 0.0049 0.42 11.1 1.4 2 23 1149 1172 1148 1172 0.93
23 31 0.64 55 4.4 0.1 2 23 1180 1202 1180 1202 0.94
24 31 5.5 4.7e+02 1.5 0.0 2 23 1209 1231 1208 1231 0.87
25 31 0.22 19 5.9 2.7 2 23 1240 1262 1240 1262 0.96
26 31 2.8 2.4e+02 2.4 1.1 2 23 1268 1290 1268 1290 0.92
27 31 0.023 2 9.0 0.3 1 23 1353 1376 1353 1376 0.97
28 31 3.3e-05 0.0029 17.9 2.3 1 23 1402 1426 1402 1426 0.91
29 31 0.47 41 4.8 1.3 2 23 1523 1545 1522 1545 0.93
30 31 0.62 54 4.5 1.5 2 23 1552 1574 1551 1574 0.94
31 31 0.67 57 4.4 2.5 1 23 1585 1607 1585 1607 0.97

Sequence Information

Coding Sequence
atggagtCGAGAGAACGTTACGATGAGTTGTGCAGGCTCTGTGCTTCATATGACGCTGTCAAAATGGATATATTTGGTCAGGAAGGCAAAAATCGTCAGCTTGTCGATAAGATACAGACGTGTTTGCCATTCAAGattGATGAGGATGATAGATTGCCAAAATGTTTATGCTATCGATGCATGTACAATCTCGAGAATTTTTACGATTTCAGAACGGCTTGCGTTAATGCGGTTGCATTACTGGAGCGATCATTACCACCAAAGGATTCGGCGAATGGTCAAATTcataaagaaatgaagaaacattCCGAGTTACGCTCGGAATTACtcaaagaaaaggaaaagatgCCAATTCTTATACCTGAAGCACCCATCGTAAATCCTAATGCCGCATTAGGCACTCCGCCACGTTTAAATTCGGACGGCGAGGCTGATCaggaaattgaagaaattctcGAACATAGTGGCACAGATGAAGGCATGGATGACAATGAGGACAGAAAATCCGATGAATACGAAATGGATATGGAAACGAATCCAAGTGATTTCTTAGAAATGACACCAATGGTAACTGAAGATGTGGAAGAGATTGACGAAAGAAATAGTCATCGTCAACCACAATTAAACACACAATCGCCACCAATTTTCCAACACACTTCAGAGCAACATGAAGTTTATGTTTGCTCTTTATGCAATAAGGCCTTCAGTTCCAAGGGGCATTTGTCACTACATGCCCGTATTCACGTTGGTGGCGGTGATGTAATCGGTGAGAAAGTCATCACCGATGATCATACATCGTATAAACGACCTTACCAATGTGATCTATGTAACAAATCATATTCAACTGCGAAACATCGATGGGGTCACGTGTCGACAACACATCGAGGACATCCAGCAGTTACATGCAGATATTGCTCGAGGATATATTCAACTCGTTCCAATCTCGATGAACACATAAAATCACGACACACAGGTTTGCCACCCCCGCCCGAATTGCCATCCGCTTATGTTCAACAAGAGAATCGATATCGATGCAAAACATGTCCAAAAATGTATACTAATGTCACCGAATTGAATAAACACAGTCGTATTTGCATTGGAGAACGGCAAAAAGACACAACGGCACGTGGAGTTACAATTCAATCGACCAAGTCAAAGGGTAAAAGCCTCATGGATACTTCTGAcgcatcaacaattgaatcgGAAGATGACAGTAAAGATTATCGTAGTGCTGAAgcaaaattatcaaagaatCCACAACTAACGATATTGAAACAAGCCCTGACGAGGAGTGAGGGATTGAAACGCAACTCTGATGGCAGAGTTTTACCATACAAGACTATGAAAGTCCCACAAGTTGACGGTAAAAGTCGTACAGATTCAGAGGGACAGAAAAGATGGTATTGCGAAACCTGTCCACAATCTTTCAcctcaattgattcattgaaagAGCATGAAGTTTCACATCAAATGGAAAAACCttatgtttgtatattatgCGAGAAAGATTTTGTACTGAAATCATCGTTGAGTAGACATATCGTTACGTCTCATGGGGTTGATCCGGTGCCAATCGTTGAGAGTGATAAATGTCTGAAAAAACCAATTAGAGGGCAGACTAGTAGCACTGGTAAACACGTGTCGAGAGTGGAAGAATTAAAAGCAAAACGAGAGCCATCAtcagaaatatcattttcatccgACCGTAACGATGATGAAGAACGTGGTAATGGcgaaaatgtaattgaaattgagaCAGTTTTTGTTTGTGAAATTTGCACACGTGATTTCAATGATCGTGCGTCATTGTGGCTGCACATACGCGCAACACACAAAGAATTTGCTGCGTTTGCTTGTGGtgtttgtttgaaaatttgttcagATAATGAACAATTGCTTAATCATGTTAATATGTATCACGGCGGTACAAAAATGTCAATGTCTGATCAGCGACGATATAGTTGTACAATATGCGGTAGACAGCATGATTCACGCAAAAAATTGATGACACACGTTTCTATACACAATGTCGAACCGGGTTACGATCCCGCTGGCTTCGTTCAATTGAATAGTAATTATTACAACGAGAATTTCAATAGCAACGACTGCGCGAATATCGATCAAAACAATATCGATTTCGACGCCGAAGACGGCGAAAAGGttgattgttttatttgcTACAAATCATTTCCAAATGAAGATCATCTAATCCGTCATCAACGAAATGCGCATAAATCCGAGCCCATGTCCGCGAGTGGTGAATTGACAAACTCGAATGGAACTGGTACAAACGGTAACAAAGGGcaatatcatttattcttcGTTTGTGAAATTTGTGGTAGCTCCCATTCGAGTAAATGGGAACGCTGGTTACACGTCAGTAGTGTTCATCATGACGAATCATCAATTCGATGCGAGCGCGACGATTGCGCTAAAATTTTTGCCACTAAGTCATTAAAAAATGACCACGCACAACATCATATGATACAAGGTGAATCACCAAATACATGTGAAATTTGTGGAAAATTGTGGGGAAGTCGCGTTGATTATTGGAAGCATGTTATGGGTGTTCATTCCGACACAGTGCCCTTAATTTGCGGTGTTTGCCTAAAAGTTTTCCCCGATGTTATGCAATTAAGTTCACATGTTAAAAGTAAACATTGGCCATTAACTACTGGTGACTTTAGTTGTGACATTTGTGGGCGTCCGTATTCCAATAAATCGAAAATGTCGAGACatagaaaaattcatggtTTAGATGCGGACGTTGGGTTCAACAATGGTatcaatgaaacattgaatgatACCACGATAAATTTTGAAGCGAACATTAACCCACTTGAGATCGATCTGACATGTGGATTGTGCACAGGGATAACGTTTCTCAATTGGAAAGATCTTTCTAACCATCGTCGTACGAAACATGCACTATTTCCGTGCGATTTGTGTAACAAATGTTACGGTAGAACGTCACACTTGTGGAAACACGTTAATCGAGTTCATAAAGGTCATGAAGATGTTACGtgtaaatattgtatgaaAACGAGCGCGTCCAAAGATCATCTAGCTGCGCATATTGCGAAAATTCATCGTTATGAACCTGATACAAAACaatttgtcaatgaaacattgaattataagGCATCAAATATAGAAGACGACTCAGCCGCTGTTCatcattgtgaaaaatgtaataaagGTTTCTTCAAACGTTATTTATTACGACGTCATATGAAAGGCTGTCAAAATTATCGTAAAGATCCAGGGGCATTATTAACACGTTGTCGTGCATGCGAGAGGATATTTAAAGATCGTGCAAGTTTACAGAAGCATATTGAAAATCATCATAGCAGTTACACGTGCCATTTATGCAATGAGACTGTAACGTCAAAACTCGGCATAATGACACATAATCGTGTAAACCATATGGACCACCCCGATCTCACGTGTGATAATagtaattgtaaaaaattattccgtACGAAAGAAGATTTAGAATCTCATCGAAAAGATCACAAATATCATAATACACCTAATGTCTGTGACTATTGCGGTGATACCGTTGAGAATAAActtaaattaaaaatgcatGTTCTCTCGCTTCATCGCAACGAAATTGGTGTTTCGTGTGGTGTATGCTTGATTCCAATGAGAGATCCGCaagatttgaaaaaacatGTTGAAGGTGTACATTCCAAGGTACTTTTAATGCCAAATACATGCCAAGTTTGTGGTAAACAGTATGCATCGAAATGGAAGGCGTTTGATCACACGAAGAAATGCCATGGAAAAGTTTTTCGAACATGTAAACGGTGTCTTGCAGTTTTTACAACAGATTCTGATATAAGATATCACTATGAACATATTCACAATGTGCCCAAAGACCAATTGGCTGGATTTGATCATCATTCTGATGTGTCAGGTAAAGGTGATGATCATGATAACTCGAGTGCGCCAATCAAAGAAGAACCTGATGATTTAGAATACGACGATAGAgcttacaataatattaatcactTCAAAGGGAGAAAACGCAAACGCTCCCATCATGATACATATGATTGTGAAATCTGcccagaaatatttttgaatcatGACACATTGTCGGAACATTATCAGACAATCCACAATACCGATCCTGAAAGAATGTTCAAGAAGTCAAGGTCGAGTAGTTCAAGAAAGTCCAAGAAACTTCgggataattttcaatgtaaaaattgCGATAAACAATTTGGCTCCAACTCGCAATTGTGGAACCATATCAATGTCTGTACGCATAGGAATTCTATGAGAGACGATTCaccaaataattttgcatcatCAATACTTGAGTCACActtgaaaaacaataatcaaattaaaaagGAGCCCATTGATTCGATGAATGAgtcaaatttgaatattccggatttcaatttatttgaagataTCAATTTGCAATTATCAGGACAGAAACCCGTACCGAATCTTATGCCTTTGTCTCACGTTAGAATGGCGCAGAGTAGCATCAAATGTTATCGAAAAGATTCTAGAAAGGTTTACGATGAATCGACAAATACAGTTTGTGCATGTGAAGTGTGTGGCAAACAATGGCCGGCTAAAAAACATCTGTGGCAACACTTGATCCGATTTCATCGTGCTGAGGCTGCGGTGACATGTGGTGTATGTTTGAAACTATGTAGCACATATAGAGATTTATCGCAACATTTAAAAGACACTCACGAAGCGATTTTGTCATGTGAGGGTAATAATTTCACGTGTAAGACATGCGGACGATATCATAATGCTCGAAGTAAACTTTTACTACATATGAGCATTCATATTAACAATGATGAACACATTTGGTGTGAAAAATGTGCGGTGAGTTTCGATTGCCAAGAGAAACTTGTACAGCATTTACAAAATTGTGTCGTGAAGCGACGTGCTGAGGAAAACGAATTCGAAGAACAGAGTATTGATTTAGAGGATGTCAAACTGGAAGGCGACGAAGATAAAGGCAGTCTCATTGGTGATAGTGCTTCCTTACTTGGAGAAGGCGAAGAAGAGGTCGATTTTGATTCTGAGGTTGAAGGAGAAGTTTCCGACGTCGATAATAACGATCCACATAGTAATTTAGATAACTCGGAAGACTCGGATAGCAGCAGTAATGGTAGTGGTAGTGGAGCTGAGAACGACGACAATGAAATAGAATCCCGCACTCATAGCAGAATAACTGGTGACGTGAGTTATCGAACGGACAGTGAAGCACATGATTCAGACGAATTTGatggtgaaatgaaaaatgttggtAAGCATATTAATAAAAAGCTGGAGAGAGATGCAGTCGATGACGAGAAAATTAGAAAAGACGATCGAAATGAACCTTCTGCTCATAAAAGGGAAGAAAACATACAACAAACATCGAGTGAACAGAAAGAAGATATTGATGACACTGATGATGAAGGACCGCCCATTCTGAGTCCAATGATGCCCATCGcagttaataataaatcggGTCATAGAGATCACAGTCCTGATGCTAGGTCGAATCATAAACAAACTGTAACGACATCGCCAACCCATGATGGAGACAATGAAGAGGAACTTCCTGAACTCGATGGAATCGGGGATGTTGATGAGAATACTGGTGGGCTATCGACAAATTCTAATACTGCTGACTACGACGAATATTCATCAGTAGCAAAATCGACTGCTAGTGCTGCTGCGTCGATGGAGGAAATTGATTTAGACAATGATGacgaagaggaagaagaaagcGTCAAAGAAGACTATCACGAGGAacaagaagaggaagaagaagacaGAGAACATAATGAAGAGGAAAGAGATGAGAATATGGCGGATGATGATAGTAGATTGCAAATCGAACAATCAACAAGAAATTCTATGTCAGAAAAAGGTAATGAAGAGAATACACAGGACAATGATAACGATGgtattgatgaagaagaaggagacgaagtatttgatgatgaaattggtGGTGGAACTGTGCAAATTGATGATTTAGATGGTACAGTTTTGATGGTCGCTAATGATGCTGATggaaatcaaatattgattcagAGGAATGTTGCCGAGATGAGTAATGATGAATCAATGGAAGGTGTTGCAGGTTATATATATCAAGCGGAGAATGACGAGGGAAATTATTGTGAGGATGATGAAGATGTTTATAGAGCTGAACATGAAGATAGTGGTGAAAGTCATAATGACGATGAGGAAATCGATGGGAAGATGGAGGAaggtgaagaagaagaagaagaggacgAGGACGAGGTGGAACATCATCAAGTCATGATGATCCAAAGTTATCATGGAGATGAGAGTAACGATTTGGAGGCTAATTCAAGTGCCAAAAATGATGTGTCAAGGACGTAG
Protein Sequence
MESRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIDEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERSLPPKDSANGQIHKEMKKHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILEHSGTDEGMDDNEDRKSDEYEMDMETNPSDFLEMTPMVTEDVEEIDERNSHRQPQLNTQSPPIFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGGGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCRYCSRIYSTRSNLDEHIKSRHTGLPPPPELPSAYVQQENRYRCKTCPKMYTNVTELNKHSRICIGERQKDTTARGVTIQSTKSKGKSLMDTSDASTIESEDDSKDYRSAEAKLSKNPQLTILKQALTRSEGLKRNSDGRVLPYKTMKVPQVDGKSRTDSEGQKRWYCETCPQSFTSIDSLKEHEVSHQMEKPYVCILCEKDFVLKSSLSRHIVTSHGVDPVPIVESDKCLKKPIRGQTSSTGKHVSRVEELKAKREPSSEISFSSDRNDDEERGNGENVIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNEQLLNHVNMYHGGTKMSMSDQRRYSCTICGRQHDSRKKLMTHVSIHNVEPGYDPAGFVQLNSNYYNENFNSNDCANIDQNNIDFDAEDGEKVDCFICYKSFPNEDHLIRHQRNAHKSEPMSASGELTNSNGTGTNGNKGQYHLFFVCEICGSSHSSKWERWLHVSSVHHDESSIRCERDDCAKIFATKSLKNDHAQHHMIQGESPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVMQLSSHVKSKHWPLTTGDFSCDICGRPYSNKSKMSRHRKIHGLDADVGFNNGINETLNDTTINFEANINPLEIDLTCGLCTGITFLNWKDLSNHRRTKHALFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCKYCMKTSASKDHLAAHIAKIHRYEPDTKQFVNETLNYKASNIEDDSAAVHHCEKCNKGFFKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETVTSKLGIMTHNRVNHMDHPDLTCDNSNCKKLFRTKEDLESHRKDHKYHNTPNVCDYCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMRDPQDLKKHVEGVHSKVLLMPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKRCLAVFTTDSDIRYHYEHIHNVPKDQLAGFDHHSDVSGKGDDHDNSSAPIKEEPDDLEYDDRAYNNINHFKGRKRKRSHHDTYDCEICPEIFLNHDTLSEHYQTIHNTDPERMFKKSRSSSSRKSKKLRDNFQCKNCDKQFGSNSQLWNHINVCTHRNSMRDDSPNNFASSILESHLKNNNQIKKEPIDSMNESNLNIPDFNLFEDINLQLSGQKPVPNLMPLSHVRMAQSSIKCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCSTYRDLSQHLKDTHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNDEHIWCEKCAVSFDCQEKLVQHLQNCVVKRRAEENEFEEQSIDLEDVKLEGDEDKGSLIGDSASLLGEGEEEVDFDSEVEGEVSDVDNNDPHSNLDNSEDSDSSSNGSGSGAENDDNEIESRTHSRITGDVSYRTDSEAHDSDEFDGEMKNVGKHINKKLERDAVDDEKIRKDDRNEPSAHKREENIQQTSSEQKEDIDDTDDEGPPILSPMMPIAVNNKSGHRDHSPDARSNHKQTVTTSPTHDGDNEEELPELDGIGDVDENTGGLSTNSNTADYDEYSSVAKSTASAAASMEEIDLDNDDEEEEESVKEDYHEEQEEEEEDREHNEEERDENMADDDSRLQIEQSTRNSMSEKGNEENTQDNDNDGIDEEEGDEVFDDEIGGGTVQIDDLDGTVLMVANDADGNQILIQRNVAEMSNDESMEGVAGYIYQAENDEGNYCEDDEDVYRAEHEDSGESHNDDEEIDGKMEEGEEEEEEDEDEVEHHQVMMIQSYHGDESNDLEANSSAKNDVSRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00997214;
90% Identity
iTF_00997214;
80% Identity
-