Mcin013343.1
Basic Information
- Insect
- Meteorus cinctellus
- Gene Symbol
- -
- Assembly
- GCA_030523045.1
- Location
- JAPYZF010003014.1:429-1469[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-09 8.4e-07 28.5 0.0 3 38 17 52 15 55 0.88 2 2 8.3 6.1e+03 -3.0 0.0 23 33 300 310 300 311 0.84
Sequence Information
- Coding Sequence
- atgCCTCGTAAAAGAATCTGGAAAACTGAAAGGGGAAATTGGACTCTTGAGACTCTTTGTACAGCTATAGAGGCTATAAAGAATGGTATGCCTATCCGAAAAGCATCAGAATCATTCAGCATCTCGTTTAGCACTTTACAAGAACGTTCAAAAAAATCTTCTCTGTTAGAACCAAATATTGGAGGCAAGACAATTTTCTCAGCTGACCAAGAAAAAGATATggcagaaaaattgaaagagatgGCAAAACTACATTATGGACTTACACCGTTAGAATTACGACGTTTTGCTTACGAGTATGCCGGAAAAAACAACATTCCCCACAAGTTTAATAGGAAAAATAAGTGTGCGGGTGAAGAATGGTTTTATCAATgcattagaaaaaataaaatttctattcgTAAGCCTGAAGCTACCAGTTTGAACCGCGTTCTAGATTTTAATGAGGACGACGTCAATCTATTTTATGATAACATCGAAGTAgttcagaaagaaaaaaatattccagcGGAAAATGTACGGAATATGGATGAATCAGCAATATCAAATGTTCAACAACCTGAAAAAGTAATTGCTGAAACAGGCCAGAAACGTATTGGTGCTATAACTAGTGGAGAACGAGGTAAAAATGTCACTATTGTATGTGCTATGAGTGCTTCGGGTAATTATGTACCACCTATGTTCATTTATCCTCGTAAAAGAATGTCACTAGATTTATGCAAGAATGGTCCAAGCggttcaatttatcattgttcTCCCAATGGTTGGTCAAACAGTGAACTGTTCTACGTATGGTtacaacattttcaaaatcaCGTCAAATCTTCAAAAGATGAGCTTACCCTATTGATATCAGATAATCACACGAGTCATATTTCAAAAGACGCTTTCAATTTTTGTCGAGAACACGGTATCAATGTGGTTACACTTCCACCTTATTCATCCCATCGTCTTCAACCGCTTGATGTGAGTTTTTTTGGACCTTTCAAAAAATCTTACCGCAAAGAATGTGATTCATTTATGAAACAACAAGCTCTCTGA
- Protein Sequence
- MPRKRIWKTERGNWTLETLCTAIEAIKNGMPIRKASESFSISFSTLQERSKKSSLLEPNIGGKTIFSADQEKDMAEKLKEMAKLHYGLTPLELRRFAYEYAGKNNIPHKFNRKNKCAGEEWFYQCIRKNKISIRKPEATSLNRVLDFNEDDVNLFYDNIEVVQKEKNIPAENVRNMDESAISNVQQPEKVIAETGQKRIGAITSGERGKNVTIVCAMSASGNYVPPMFIYPRKRMSLDLCKNGPSGSIYHCSPNGWSNSELFYVWLQHFQNHVKSSKDELTLLISDNHTSHISKDAFNFCREHGINVVTLPPYSSHRLQPLDVSFFGPFKKSYRKECDSFMKQQAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -