Mcin010690.1
Basic Information
- Insect
- Meteorus cinctellus
- Gene Symbol
- -
- Assembly
- GCA_030523045.1
- Location
- JAPYZF010000814.1:1139-2189[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-13 2.1e-10 40.0 0.1 5 39 19 53 18 56 0.94 2 2 5.5 4e+03 -2.5 0.0 17 23 148 154 142 155 0.73
Sequence Information
- Coding Sequence
- ATGgttcacaaatataaaaggaaGACTAATCAACAGTCATGGGAGAAAATATCGATGGCAAAGGCCATTCGAAAAGTCGTCGATGGAGAGTTATCCTATAGAGAAGCTGCTGAGCGATATAACGTTCCGAGATCGACACTTGTTCGACGAGTGAAAACGTTGAAACTCAATCCTGACATGGAATTAGCGATTCATAACGGTTTAGGAAGGTTCAAAACTACCTTCAACTCCGAACAAGAACGGGAAATGATAAAGTATTTGAAGGAAATGGAAGAGAAGTTCCATGGACTCACGCTTCGAGAGTTTAGATCCCTGGCATATCAAATCGCCGAGAAAAATCATCTAAATCACAATTTCGTCGGTGGTATGGCCGGAAAAGATTGGATGCGGTCATTTCTACAATGGAACAAGGATTCGATATCGTTAAGAAAATCTGAACCGACCTCCCTTGCCCGTGCAGCAGGGTTCAACAGGACGGTAGTTGAAAACTTTTTCTCCTTACTGACGTCAGTAATCGATCGGCTTCATTTGACGCCAGACCGAATCTGGAATGTGGACGAAACTGGTTGCTCGACCGTGGCAAAACATCAATCCAAGATTTTGGCCACAAGAGGCAAAAAACAAGTTGGTGTTATAACATCGGTTGAGCGAGGAAAATTAGTTTCGGTGGAGATCTGCGTATCAGCAGTGGGTGTAGCCTTGCCACCGCTATTCATTTTTCCGCGAGTCAAAATGAAGTCGAGCTTGCTGGATGGGTCTACGCCCGGCAGCTGGGGGCTGCGCCATCCAAATGGCTGGATGCAGAGCGACTTGTTCTTTCAGTGGATCGAATGA
- Protein Sequence
- MVHKYKRKTNQQSWEKISMAKAIRKVVDGELSYREAAERYNVPRSTLVRRVKTLKLNPDMELAIHNGLGRFKTTFNSEQEREMIKYLKEMEEKFHGLTLREFRSLAYQIAEKNHLNHNFVGGMAGKDWMRSFLQWNKDSISLRKSEPTSLARAAGFNRTVVENFFSLLTSVIDRLHLTPDRIWNVDETGCSTVAKHQSKILATRGKKQVGVITSVERGKLVSVEICVSAVGVALPPLFIFPRVKMKSSLLDGSTPGSWGLRHPNGWMQSDLFFQWIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -