Basic Information

Gene Symbol
ct
Assembly
GCA_030523045.1
Location
JAPYZF010000528.1:65542-81175[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.2e-28 2.1e-24 85.2 0.0 2 72 459 530 458 535 0.95
2 3 3.1e-32 1.1e-28 99.0 0.0 3 77 883 958 881 960 0.96
3 3 1.9e-30 6.6e-27 93.3 0.0 3 76 1126 1200 1124 1203 0.96

Sequence Information

Coding Sequence
ATGTTGAATGTTTATTGGTGGAAAATCGAGATCAGCCAATTGGTGGAAGAGGTTTCGAGGTTGCAGCAGAGTTTGCAGCGGCTCCAGGAAACGAGTGCGCAAGCAACATCACGTTTAGAAGAAGAATTGGAAACACGAAGACAGCATATTAATCGATTGGAGAGTAAACTCGAACGGCAACGTGATTATGACGATATGAAACGTGAAATAAGTGTTTTAAGATCAGTGGACTTATCACAAATACCAACGGGTGAACCTGGCAAAAGTTTAGAGCATTTATTGATGGAAAGGACAAAAGCATTACAACAAGCTGAAACATTGAAGCCTTCAAGTACACCAGACACACTCGGTGGACTAGCTTCGCCCCTGCAGCGCGCCGCTACCGCTTCGCCCCATGGCAGTGTCGCGAGTGGTGGCATCGGCGGAAGCGGTACCCCCGCGTCAATTGTAACCACCCAACAGGCGCTCCCAACACGCTCCACCCCGACGCCCTCGTCAGTAACCTCAACAGCCACCTCGACTCTCCTATTTCCACCACCTCTCCAAAATGTTGAAACATTCGGATCTTTTCTGGGCGAAGAAATTGTTGCTAATTGGAGACGATCATTGGAACGATCAATAATAAgtcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaatcacAATTGTCAATAGCGCCACTATCCCAATTGTCTCAGCTCCAACAGAGCACAACTGCCCAACACACTttgcaacaacaacaaccacagCAGCCGATACACCAAACATCAATCCATAATCTACATCCACCAACGACACCAAATCTAAATCACCTTCCATCACCAACAGATCCaacctcatcatcatcatcatcaatcaaCAATCCGGCGCCGGTGAAATCATGTACGCCACTCCTGGTTGGATCATTGGACGCAACAGAGAAAGCACCAACGCCAATACCAGGACACGAAACACCAGCACCACCAACTCCATCATCAACTCTAGCCTTGACATCACCAACAGTCACTCATCAATTGTCAGCCAGTATGTTAGATACCACTTGCAATATTAATGGATCGACGTTATCGAATATAATAGGAAATCATCCACCAAAAAGTCCACAAGAAGAGTCATgtcacaataacaataatagcCACTATTTAGCTAACAATAATATCGGCGGAATAAATGTCTTGGATTCAATCAAAGGCCCATTTAGATTTGACGATAGAACACATCCATTTAGATTTGGTGATGAATTTGGCGCAGCGAGTATGGCTGGACGTTTAGGAGAATCATTGATACCAAAGGGCGATCCAATGGAAGCACGATTGCAAGAAATGTTACGTTACAATATGGACAAATATGCCTCACAAAATTTGGACACGTTACAAATTGCACGGCGGGTTAGAGAATTGTTATCGATACACAATATTGGTCAACGACTGTTTGCTAAATATGTTCTCGGATTGAGTCAAGGGACAGTCAGTGAATTATTGAGTAAACCTAAACCATGGGACAAATTGACTGAGAAGGGACGTGACAGCTACAGAAAGATGCATGGTTGGGCGTGTGACGAGAATGCTGTTCTGCTACTCAAGTCCCTGATACCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAAGGCTTACCAGCGTTTGCACGTGGACCACAAGatggaggtggtggtggtggtggtggtccAGCCGACATAAATGACGAAAGGATTGCCCATATGCTGTCGGAATCGGGCCATCTACAATTGAGCCGTGAACATGATACGTCCAATGATGCTGATAGTAAAAGCCCAAGTCGTTTGGGTTGTCCTAGTCCGTTTGGCAAAGACAGATTTGACAGTCAAAATCGTAGattaaagaaatatgaaaacgaTGACATTCCCCAAGAGAAGGTAGTGAGAATTTATCAGGAGGAATTAGCCAAATTGATGGGCAAAAGAGATGAATTACGCGGACCGCGTGACTTCCCACCAAGTGCGATGTTTCCACACTTTTTCAGTGGTGGCCAGGCTCTCCAAGGAATGGAGCGTCCGCAAGATGACATTCGGCTTGCGTTGGATGCATATCATCGAGAATTACAAAGATTAAATGCCGCACCAGGCCAGAATGCAACGTTGGCAGGATTGCCAGGATTACCAGGTCTGCCGGGACTGTTGGCACTACATCAACAGGCCTTACACCAAAATCATCTATCGGCGAATGGCGGTAGTGGGACCGGTGGGGTCACTACTGGTGGCGGAGTTCAAGATCTCAGCCTTGGCAAAGCCGAAGCAcgtaacaaaataatgaatggtgTCAGCGatgaagagaaggaaaaaatggaagaagcAATAAGACATGCAGGAAGTGCATTTTCGTTGGTCAGGCCAAAACAAGAACCAAGTGGAACTCAATCAACACCTGGTGGTTCTAGTGCAAGTTCACCACTTGGCAACTCAATATTACCACCTGCTATGACACCTAGTGATGAATTCACTGGTGCGGCGGCAGCGAGTCCACTACAAAGAATGGCATCGATAACTAACAGTTTGATCAGTCAACCGTCCACACCAACACATCATTCGGCAAATCAACGACCATTAAAAGCCGTATTACCACCAATAACTCAACAACAATTTGACCTTTACAATAATCTCAACACGGAGGACATTGTGAAGAGGGTGAAGGAGCAATTGTCGCagtattcaatttcacaacGACTTTTTGGAGAGTCAGTGCTTGGATTGTCACAAGGATCAGTGTCAGATTTATTGGCACGACCGAAACCCTGGCACATGCTTACACAAAAAGGGCGTGAACCATtcataagaatgaaaatgtttttggaAGACGAACAAGCTGTGCATAAATTGGTTGCAagtcaatataaaattgcgccggaaaaattgatgaggaCCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCGTGTGGAACACCAATGAAACCGATGCCACCGACAAAATTGGTACAGGAGCAACTTCAAAATGCTGCCAAAGCTCAAGCGGCTGCGGCAGCACAAGCAGCGGCACAAGCGGCAGCAGCAGCCGCAGCAGCTGCTGCCCAACATCAACAAGACAATCAAATACAATTGGGCCCACCCCAACCAAGTCCACAGCAACATCAGCAGCATTCGCAACCAGCTTTACCAATGATGCTAACCCCACCAGGACCACATCATTCACACGGTCAAATGTCTATCCAAGAATTGcagaaaaaacaacaacagcaacaacaacaacaacaacaacaactgGGTCTACATTCACCACACCAAATGACACCATCGCCATTACGAAGTCTCCATCCGTACATTTCATCGAGTGTCTATGAAGTGGCAGCGTTAACCCACGAACTCGACACCCAAACGACGacaacgaaaataaaagaggCACTATTAGCTAATAATATTGgccaaaaaatatttggcgAAGCAGTATTGGGTTTGTCACAAGGTTCAGTGAGCGAATTACTAAGTAAACCAAAGCCATGGCACATGTTAAGTATCAAAGGACGTGAGCCATTCGTCAGAATGCAATTATGGTTATCGGATCCGCATAATATTGAGAGACTTCAAGCACTGAAAAATGAGAGACGTGAAGCAAATAAGAGACGACGTAGCAGTGGTCCAGGTCACGATAACAGCTCTGATACATCAAGTAATGACACTGCTGAATTTTATCACGCGTCATCTCCTGGTCCAGGACCACCATCAGCCAAAAAACAACGTGTACTATTTTCTGAAGAGCAGAAAGAAGCATTGCGACTTGCATTCGCACTAGATCCCTATCCAAATGTCGCGactattgaatttttagcAGGAGAATTGGGTTTATCATCCCGTACAATAACTAATTGGTTCCATAATCATAGAATGCGTTTGAAGCAACAAACGCCACATGGACAGCCTGAATCACAATCACCGCGAGAACCTGGGCAGCCATTTGATCCAGTGCAGTTTCGTTTACTTTTAAATCAACGACTTTTGGAATTGCAAAAAGAACGATTGGGTTTGGGAACTATGCCAATACCATATTCACCATACTTCAATCCAAACTTGGCAACATTAATGAGTAATGCAATCAAAGAACAGTGTTCGGGATTGGATTTATCAATGGGTGCACTCAAACGTGAATTAAATCAAGAATTTGAGGATGATGACGCGGATGGTGATGATGCCATGAGCAATCTTGGAAGTGAGGATTCTGATGGTTCAACTGGTAGTATAAAACGCGAGCCAACAGATCAAACACCGAATGTACCATCACAAACGAGTGGTGGAGtatcaacagcagcagcagtagcaGCAGCCGCCGCCGCTGCTAGATCAAATCGAAGAAAACCTGCAGCGCCACAATGGGTGAATCCAGAATGGCAAGAGCCAGCGCGAACTGGAGATGAAGTTATTATAAATGGTGTGTGCGTTATGAAAACCGACGATTATGGTGTAAAAAGAGAGATTGAAGAGACAATTAGAGTCGAACCGACACCCGTACAAGACAGATACGATGATGACAATCAAAGCGATGTGTCTTCAGTTGTATCGGGTGCTGGTGATGGTAATAATGGACCGCCAGACCATGATCGTGATAGTGTTAGCCCAAGTCCTATGAAATCCAGGGATAATAGTCCAATGGCGTCACCAACATCACGACCGCCATCATCAACGCAGCAACAAATTGTCCAAAATTCGATTGACAGTCCAAAAGAAGTGAAACACGAACCGGAAGAATCGTGGGACTATTGA
Protein Sequence
MLNVYWWKIEISQLVEEVSRLQQSLQRLQETSAQATSRLEEELETRRQHINRLESKLERQRDYDDMKREISVLRSVDLSQIPTGEPGKSLEHLLMERTKALQQAETLKPSSTPDTLGGLASPLQRAATASPHGSVASGGIGGSGTPASIVTTQQALPTRSTPTPSSVTSTATSTLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIISQQQQQQQQQQQQQQQQQQQSQLSIAPLSQLSQLQQSTTAQHTLQQQQPQQPIHQTSIHNLHPPTTPNLNHLPSPTDPTSSSSSSINNPAPVKSCTPLLVGSLDATEKAPTPIPGHETPAPPTPSSTLALTSPTVTHQLSASMLDTTCNINGSTLSNIIGNHPPKSPQEESCHNNNNSHYLANNNIGGINVLDSIKGPFRFDDRTHPFRFGDEFGAASMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLQIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGLPAFARGPQDGGGGGGGGPADINDERIAHMLSESGHLQLSREHDTSNDADSKSPSRLGCPSPFGKDRFDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGKRDELRGPRDFPPSAMFPHFFSGGQALQGMERPQDDIRLALDAYHRELQRLNAAPGQNATLAGLPGLPGLPGLLALHQQALHQNHLSANGGSGTGGVTTGGGVQDLSLGKAEARNKIMNGVSDEEKEKMEEAIRHAGSAFSLVRPKQEPSGTQSTPGGSSASSPLGNSILPPAMTPSDEFTGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDEQAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAAAQAAAQAAAAAAAAAAQHQQDNQIQLGPPQPSPQQHQQHSQPALPMMLTPPGPHHSHGQMSIQELQKKQQQQQQQQQQQLGLHSPHQMTPSPLRSLHPYISSSVYEVAALTHELDTQTTTTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFVRMQLWLSDPHNIERLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHASSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQTPHGQPESQSPREPGQPFDPVQFRLLLNQRLLELQKERLGLGTMPIPYSPYFNPNLATLMSNAIKEQCSGLDLSMGALKRELNQEFEDDDADGDDAMSNLGSEDSDGSTGSIKREPTDQTPNVPSQTSGGVSTAAAVAAAAAAARSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMKTDDYGVKREIEETIRVEPTPVQDRYDDDNQSDVSSVVSGAGDGNNGPPDHDRDSVSPSPMKSRDNSPMASPTSRPPSSTQQQIVQNSIDSPKEVKHEPEESWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00996230;
90% Identity
iTF_00996230;
80% Identity
iTF_00996230;