Mcin003899.1
Basic Information
- Insect
- Meteorus cinctellus
- Gene Symbol
- retn_1
- Assembly
- GCA_030523045.1
- Location
- JAPYZF010000088.1:281730-286180[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-20 1.2e-16 60.8 0.0 16 89 3 74 1 74 0.95
Sequence Information
- Coding Sequence
- atgatttcaGGCACTCCAATCAATCGATTGCCAATTATGGCAAAATCTGTGCTTGATCTCTACGAACTATACAATTTAGTAATTGCACGAGGTGGATTGGTTGACGTCATCAACAAGAAACTATGGCAGGAAATTATCAAGGGTCTCCACCTGCCGTCGAGCATCACTTCCGCCGCGTTCACGTTGCGCACCCAatacatgaaatatttgtaccCATACGAATGTGACAGAGAAAAACTGTCGACGCAAGCAGAATTGCAAGCAGCGATCGATGGTAATCGACGTGAAGGACGTCGTAGCAGTTATGGTACTTACACTGGTGTTGGTCCAGgtgggaatgaaaatatgatacaGAGAAATTCCCATACGCCCAGCTCTTTGGTAATGCACACACAAATGTCACCTATGTCCCTCGTAACAACAGCGGGAGGTCAACATCACGGGCAACAATCAATGATGAATGGCACTGGAGCACTTACCCCTTTGTCGCACCACCCTCATCTCTCCGCACACAGCCAAGCTTTATTGGGACAGCAATCGACAGCCGGATCATTGACGGCTATTACACCTCTTGAAATTAACGCAGGAATGATGGAGTATGTTAAATTATTGAGTAAAGAATTGAGAAATTCTACCGGGGTATGTTCACCACCGCCAATCCATCGGCAAGGCAGTGTTCAATCACCTTCAGgaacaccaccaccaccacgtGACGCAGCCATGAATGCCATGGAGTTTGCACGAATGACATTCTGGAAtatgcataataataatactctATATTCATCAAACATGGGTCATCAGGCAGCATCAATGTCACCACAACGCTCACGGTCGCCACATCGACCGAGGTCGACTCCTGAACCGCAAAGAGAAGCGCTCGATCTTGGCTTGCGTTCATCGCCAGTATCAATGTCATCACCCGCACGTCAGAGTCCGGCAGAAAATAATCTCCATGTCAGAAAAGATCGAGGATTCTCGGAGGCGACGGGGACAGCCCAAAAACGTCCCTGTTATGAAGACGATGACCACGATACAGATGAGAAAGTACCAGCGTTCGCGGGTACacatattaaaatttcaaatcgtGGCGATAGTAAGAATGGCGATAATTCTTTAGTTGTTAGTATGGAATTGAATGGTGTTATGTACGAGGGTGTATTATTTGCACAAAGCGAGAGTAAACGCAGAGCGAATccaacgaataataataacaacagtAAAAGTAGGAGTGTTTTAATgtaa
- Protein Sequence
- MISGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECDREKLSTQAELQAAIDGNRREGRRSSYGTYTGVGPGGNENMIQRNSHTPSSLVMHTQMSPMSLVTTAGGQHHGQQSMMNGTGALTPLSHHPHLSAHSQALLGQQSTAGSLTAITPLEINAGMMEYVKLLSKELRNSTGVCSPPPIHRQGSVQSPSGTPPPPRDAAMNAMEFARMTFWNMHNNNTLYSSNMGHQAASMSPQRSRSPHRPRSTPEPQREALDLGLRSSPVSMSSPARQSPAENNLHVRKDRGFSEATGTAQKRPCYEDDDHDTDEKVPAFAGTHIKISNRGDSKNGDNSLVVSMELNGVMYEGVLFAQSESKRRANPTNNNNNSKSRSVLM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -