Mvio026486.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- nfxl1
- Assembly
- GCA_030762175.1
- Location
- CM060837.1:71798739-71812903[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.65 1.4e+04 -2.0 1.1 15 19 174 178 173 178 0.81 2 5 0.062 1.3e+03 1.3 0.3 4 10 209 215 208 216 0.95 3 5 5.4e-08 0.0012 20.6 16.0 1 19 223 240 223 240 0.99 4 5 1.3 2.9e+04 -3.0 0.6 6 10 266 270 265 271 0.51 5 5 3e-10 6.5e-06 27.9 13.3 1 19 276 294 276 294 0.99
Sequence Information
- Coding Sequence
- ATGGCTGATCCACATAAGAATCCATGGAAACGAGGTGAGCATAGTCGGAGCCAGGCTgttagaaaaaaatcaggtatacAGAGTGCAACTAATAAAAAACTTCATGGAGGGACACAAAGCTTAGCAGAGAAAAAATTCCAGGAGGCCCAAGCTCGCCTTCAGGCATCAGTTCAAAAGCATATGAAGCAAGAATATGACTCCTCATCAGAAGAAGAGGAACTTGAGAGCGACAACATTTTGGGCTCAGTTTTAAAGCTCTATTCACAAATTGGAGGAAAGACTGAAGATCTGGGACGTACACAACGATTCCTGGAAGATGCATTTCAGTCCGGAGCAGCATCTTGTCTTATTTGTATTGCATCTGTTAAGAGAAATGATGCAATTTGGAGCTGTGTggagtgtttttgtttttttcacctGCCCTGCATCCAGCGCTGGGCAAAGGACAGCATCATGCACCAGAAACAGGCCTTGGAGGAACTACCCCAAAATAGTCAACCTACAACATTCTCTTGGGCATGTCCCAAATGCAGACACAACTATGAACAGACCAGTATACCCCAGAGGTATTATTGTTTTTGTGGTCAAGCTGAAGATCCTCCCTTTCATCCATGGCTGGTTCCACATTCTTGTGGAGAAACCTGTGGGAAAGACTTAAAACCATTTTGTGGTCACGCTTGCCTCTTGCTTTGCCATCCAGGTCCATGCCCACCTTGTCCAAAAGTggtgaaaacaaaatgttactgTGGAAAGCAAGAGCCAAGATCACAGCGCTGTAGCAATAAGATTTGGTCATGTGGTTCACCCTGTGGACAGTTACTGGGATGTGGTCGGCACTCTTGTACTGAAGTGTGTCATGCAGGGGACTGCTCACCATGTCCATATACAAGTGTTCAGAGTTGTGAATGTGACAGAGAGAAGATGCTTCGTCCCTGTGCTCAACCAACATGGAAGTGCACTAATCAAAATTGGAGTAGCCAATTCGGACATCACTTACCAGCAGACTATTCGCATGTGGATCAAGGGACCAACATGAAGGCAAAAGCTCAAATGCTGTATCTTGGACACTGGAAGTCAGTCTAG
- Protein Sequence
- MADPHKNPWKRGEHSRSQAVRKKSGIQSATNKKLHGGTQSLAEKKFQEAQARLQASVQKHMKQEYDSSSEEEELESDNILGSVLKLYSQIGGKTEDLGRTQRFLEDAFQSGAASCLICIASVKRNDAIWSCVECFCFFHLPCIQRWAKDSIMHQKQALEELPQNSQPTTFSWACPKCRHNYEQTSIPQRYYCFCGQAEDPPFHPWLVPHSCGETCGKDLKPFCGHACLLLCHPGPCPPCPKVVKTKCYCGKQEPRSQRCSNKIWSCGSPCGQLLGCGRHSCTEVCHAGDCSPCPYTSVQSCECDREKMLRPCAQPTWKCTNQNWSSQFGHHLPADYSHVDQGTNMKAKAQMLYLGHWKSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -