Mvio026488.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- nfxl1
- Assembly
- GCA_030762175.1
- Location
- CM060837.1:71814324-71829578[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 9.4e-09 0.0002 23.1 17.8 1 19 71 89 71 89 0.99 2 15 0.017 3.6e+02 3.1 11.7 3 18 126 141 114 142 0.87 3 15 0.19 4.1e+03 -0.3 0.5 1 10 151 160 151 160 0.75 4 15 0.00024 5.3 9.0 18.3 1 18 176 193 176 194 0.91 5 15 3.1e-11 6.7e-07 31.0 14.4 1 19 203 221 203 221 0.99 6 15 2.6 5.6e+04 -3.9 1.7 9 13 227 231 225 231 0.71 7 15 0.76 1.7e+04 -2.2 1.0 5 10 249 254 249 254 0.89 8 15 0.00052 11 7.9 7.4 10 19 270 279 267 279 0.90 9 15 0.003 64 5.5 6.2 3 12 290 299 289 299 0.91 10 15 3 6.5e+04 -4.2 3.5 14 19 328 333 328 333 0.86 11 15 0.47 1e+04 -1.5 0.8 6 10 359 363 358 363 0.89 12 15 5.1e-05 1.1 11.1 3.7 1 12 369 380 369 380 0.96 13 15 7.5e-07 0.016 17.0 16.5 3 19 410 426 409 426 0.92 14 15 0.00016 3.5 9.5 15.2 1 18 469 488 469 490 0.89 15 15 1 2.2e+04 -2.6 0.9 6 10 519 523 518 523 0.89
Sequence Information
- Coding Sequence
- ATGGAAGACCTTCATTTGCAATCATGTCATGGAAATAGTCACACTGCTCCAAGTCAATGGCAACGCTGCTTTGGAGACCAAAATCCTACAGATCATCTCACATGGGCAGATACGGATCAGTTACCATCCCTAGAATCATGGTGGTCTGGTCCTAGCTGGCTTGTACAAGATGATGCCTGGCCAGTTGATGTTTGTGGCAAACCCCTGAGCTGTGGGCACCATACCTGTGAGCAAATCTGTCATCGAGGATCCTGTGGAACATGTCCACTAGCTCAGGATCGTTTTTGTCCATGTGGTAAAACATCATACATACTACCATGCACAGAAGAGACACCCACCTGTGGTGATACATGTGGTCGCACACTTGAGTGTAAAGCACATGTATGTTCAAGAAGTTGTCACAGGGACAAATGTGGCAGTTGTTTGGAAACTGTTTCAAAGCAGTGCAGATGTGGTCTACATACCAAGGAACTTCCTTGTCAGAAAGAATTCTTATGTGAAACCAAATGCAAGCGCACCAAAGACTGTATGCATCATCCTTGCAACCGTAAGTGCTGTGATGGAAATTGCCCTCCATGTGAGAAGCCATGTGGAAGAATGTTAAGATGTGGGAACCACAAATGTGAATCAGTATGTCATCGAGGGCCTTGCTATCCTTGTCCTCTAACTGTGGAGGTGAAATGTCATTGTGGCCTCACTGTTCTGACGGTTCCTTGTGGACGCAAGAAACACACACGTCCACCACGTTGCAGCAAACCTTGTAGAATTGAACCAAACTGTCATCATCCAAGACGGGAGCCTCACCGTTGCCATTTTGGGGACTGTCCACCATGTAGGCAAGTATGTGATAAGATCCATAAGCTCTGCAGGCACAAATGTCCTGCACCATGTCACTCGGCAGTATGGGTGAAGATACAGGAAGAACGCAAACCAGCAGGACCATGGGAAAAGATTCAGCCACACATTGAGATGAGAGATCTACCATGTCCTGATTGCAAGGTTCCAGTTGAAGTACAGTGCATAGGAGGTCATGAAACCAGTAAATGGCCTTGCTACTTAGCCAAACCCTCATCATGTCAGCGCATCTGTGGACGCAAGCTTTCGTGTGGCAATCATTTTTGCAGTTTGCCTTGCCACACTGTGGAAAATGCAGCTGATGAGTTGTCAgcAGGGAGTAATTGTGAGATATGTGAATTTGGTTGCACTAAACAACGTCCTGAAGGTTGTACACACACCTGCCTTAAGCCATGCCATCCAGGCAGCTGCCCCCCTTGCAGTCAGATGATACGCATACGCTGCAACTGCACTTTAAACCAGTTGTATATACGCTGCAGTGAATGGACATCTGCCAAGGAAAAAACAGTGTTGCAAAATTGTGGAAACCAGTGTCCAAAATTGTATCCCTGTGGACATCGGTGTCGGTCAGATTGCCATACTGGTGAATGTCCAGAACCAGAATCATGCCACAAAAAGGTGAAGGTGACGTGTTCCTGCAAACGCTTGCGAAAAGACTTCCCGTGCAATATGGTTAGATCTGGAGAAGCAAAGGTTGAATGTGATGAAGTATGCAGGCAGAAAAAAGAGGAGGAATTAAAAGCTAAGGAGGCAGAAGAAATGGCCCGACTTTTAGAAGAAGAGCGCAGGAATCGAGAGGAATTGGAAAAATTCAATAAGAAGTTTCAGGGTACAAGAAATGGCAAAAAGAATCGTCGTAAACACTTCCAAGCAGAAGAATCTGCATCTTTGCTGTCCAAATATTGGTTTCTGTTGATCTGCATGTCTGGATTAATCTTGGCCTTCTTTGCAATAGTTCTTTGGAAGTAA
- Protein Sequence
- MEDLHLQSCHGNSHTAPSQWQRCFGDQNPTDHLTWADTDQLPSLESWWSGPSWLVQDDAWPVDVCGKPLSCGHHTCEQICHRGSCGTCPLAQDRFCPCGKTSYILPCTEETPTCGDTCGRTLECKAHVCSRSCHRDKCGSCLETVSKQCRCGLHTKELPCQKEFLCETKCKRTKDCMHHPCNRKCCDGNCPPCEKPCGRMLRCGNHKCESVCHRGPCYPCPLTVEVKCHCGLTVLTVPCGRKKHTRPPRCSKPCRIEPNCHHPRREPHRCHFGDCPPCRQVCDKIHKLCRHKCPAPCHSAVWVKIQEERKPAGPWEKIQPHIEMRDLPCPDCKVPVEVQCIGGHETSKWPCYLAKPSSCQRICGRKLSCGNHFCSLPCHTVENAADELSAGSNCEICEFGCTKQRPEGCTHTCLKPCHPGSCPPCSQMIRIRCNCTLNQLYIRCSEWTSAKEKTVLQNCGNQCPKLYPCGHRCRSDCHTGECPEPESCHKKVKVTCSCKRLRKDFPCNMVRSGEAKVECDEVCRQKKEEELKAKEAEEMARLLEEERRNREELEKFNKKFQGTRNGKKNRRKHFQAEESASLLSKYWFLLICMSGLILAFFAIVLWK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -