Basic Information

Insect: Metallyticus violacea
Gene Symbol: salm
Assembly: GCA_030762175.1
Location: CM060831.1:55435138-55499871[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.1e-05 0.0013 20.8 0.9 1 23 415 437 415 437 0.98

2 9 2.2e-05 0.0027 19.9 2.1 1 23 443 465 443 465 0.98

3 9 0.14 17 7.9 3.8 2 23 822 843 821 843 0.98

4 9 9.5e-08 1.2e-05 27.3 0.6 1 23 849 871 849 871 0.97

5 9 0.00013 0.016 17.4 2.6 1 23 881 903 881 903 0.98

6 9 0.0056 0.68 12.3 2.1 2 23 1191 1212 1190 1212 0.97

7 9 0.1 12 8.3 1.0 1 14 1218 1231 1218 1232 0.92

8 9 3e-06 0.00037 22.5 4.0 3 23 1396 1416 1394 1416 0.96

9 9 2.4e-07 3e-05 26.0 0.9 1 23 1422 1444 1422 1444 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.1e-05	0.0013	20.8	0.9	1	23	415	437	415	437	0.98
2	9	2.2e-05	0.0027	19.9	2.1	1	23	443	465	443	465	0.98
3	9	0.14	17	7.9	3.8	2	23	822	843	821	843	0.98
4	9	9.5e-08	1.2e-05	27.3	0.6	1	23	849	871	849	871	0.97
5	9	0.00013	0.016	17.4	2.6	1	23	881	903	881	903	0.98
6	9	0.0056	0.68	12.3	2.1	2	23	1191	1212	1190	1212	0.97
7	9	0.1	12	8.3	1.0	1	14	1218	1231	1218	1232	0.92
8	9	3e-06	0.00037	22.5	4.0	3	23	1396	1416	1394	1416	0.96
9	9	2.4e-07	3e-05	26.0	0.9	1	23	1422	1444	1422	1444	0.98

Sequence Information

Coding Sequence: ATGGCAGAGGTTAATTCTTCAAGTGTTGCTTACTGCGGGGGATGGAGGATGCTGAACTACCTCTTGAAGCTAGGCGAGAGCTCAGCCTCCGGGTCAGAAGATGAAGGAGGAGGAGGCACCGGAGAAGCTGAAGGTGCTCGGAGACCATCCATTTCGACAGAGGAACACATTTGTGGCATTTGTCAGACGGAATTCCTCGACATCTCGGAGTATATCGAACACAAGAAAGAGTGCTGCGGAGCTCTCCCGTCCTCCgcggaggatgaagaagaagaagacgaagaggGTGAGGGTGGTGAAAAAGTGCGGCGTCAACGACAAGACGTTGAGAACAACAACGACAGTGACCTTCAGCAAGATGATGGAGAGACGCCTCCTTTAACCGGCTTCCCGTTTACTCTGCCTCCTGTGCCGGCGGCAGCTCCAGGCCACGTGACCTTGGAGGCTCTACAGAACACCAAGGTAGCCGTAGCACAATTTGCAGCCACCGCCATGGCCAACAATGCAGACAACGCTGCAGCCCTGCAAGAACTAGCAGTTCTTCAGTCGACGCTGTTCACGCTGCAGCACCAGCAAGTGATGCAGCTATCGCTAATACAGCAGCTTCAGCAGCAGTTACAGATAACTCGTTCCAAGGAAGGTAGTCCGGTCTCCCCACCGCCTCAACCGCCCACCCCAGTCTTACCTCCACAACCCGCAAAGACTTTAGCACCAAACACGAGACCGTCTAGTCCCGTGACAATCAAACAAGAGCCTTCGCCTCCCCCTGCATCACAATCTGTACCACCCACGCAATCAACATCGCTACCTCCAACGCAACAACCTTCATCTAGCGGTTCTATCACGTCATTGGCAGCGGCAACATCAACCCCATCGTCGTCATCGCCCTCTACAGTAGTGTCGGTATCGTCATCGGTGGCTGGTAGTATACAGCCTCTTCCTCCTAAAACTACGTCCCCAGTGCAAGCACCTCCCCCTCCACCTCCTCCGCTATCAATGTGTTCGATTTCTTCCACTCTCGCGTCGTCCATCATAACAAATCCTGACCCACCACCTCTGAATGAGCCCAATACGTTAGAAATGTTGCAGCGACGTGCGCAGGAGGTTTTGGACAATGCAAGTCAAGGGCTTCTCGCTAACAATTTGGCCGACGAGCTAGCTTTCAGAAAAGGAGGTGGAAAATCCGGCTCCTCCCTGTCACCCTATGACTCCAAGTCCGGTAGAAATGAGCCATTTTTTAAACATCGTTGCCGCTATTGCGGAAAAGTGTTTGGGAGCGATTCGGCTCTTCAGATACATATCAGGTCACACACAGGTGAGCGTCCCTTTAAGTGCAACGTGTGCGGTAGTCGTTTTACCACTAAAGGTAACCTCAAGGTCCATTTCCAGAGACACACGGCCAAGTTTCCGCACATAAAAATGAATCCTAATCCTGTGCCAGAACATTTGGACAAGTATCATCCACCTTTGCTCGCCCAGATAGGCCAGCACCAAAGCATGTCTCCTGGTGCTGGTTTACCTcctcatcaccaccatcatcctCATCATCCACCAccccctcctcctgctcctcatCACTCCTCCCATCCTCATCATTCCTTTCATCCTAGTGGGAATAGTGGTTCGAGCTTCCCACCGACAGGTTTACCTCTATACCGACCGCCACCTCCACCTCACGAACTGATGTCTCACTTGCATCAGCCGCCTCCTGTTCCGCCTCATCGCCCACCTCCTCATGAGCCACCGGCTCCACCTCCCCCTCTCCCCAAGCCGCCTCTTTTGCAGCATCCCGTGTCAGCTCTCTTTGGAACTCAGGAAGTACCCGAAAACCTCAGCAAGCCATCACATTCCCCAGAACAGCGCTACAAAAAAGAACCAATGGAAGAGAACGATTCAGAATCTAACCGCGAAACTTCCTCACCGACAAGAAGACTTCAGAGTCCCAAGCAAGAACCCGAAACGGATCAGGAACAAGAAGGTGGAGATATAGAAATGTCCGAAATAGAGAGATACCAACCATCACCTTCCCCATATGACGAATGCAGTTTAGATAGTAAATACAGCAACGAAGATATGTTGATGGGTGAACCTGATAGTCCCTTGGATAAAAACGAAGACAGTCTACAAGAACAGCCAGAAAACCTTTCCAGCAAAAGTGCATCTATTACATCATCAGTGGGACAAAGGTTACCACCGTCTATTCCTTTTCCTCACACAGCAGTGTCTCCTCCAAGCAGCACATCCTCAGGCAGCATGAACACTCTCCACACACCTGTGGGACCCATATCATTGCCCAACGACGTGGATCCTGCAAAGGACCCTGCCATTTACACAAATCTTCTCCCACGACCCGGAAGTAATGACAACTCTTGGGAAAGTCTAATAGAAGTGACTAAGACATCAGAAACGTCCAAATTACAACAATTAGTGGATAACATTGAACACAAGCTCACGGATCCAAATCAGTGCGTCATCTGTCATAGAGTGCTATCATGCAAGAGTGCGCTTCAAATGCACTATCGGACGCACACGGGAGAACGGCCCTTCAAGTGCAAGATTTGTGGCAGAGCTTTCACCACAAAGGGCAACCTAAAGACACACATGGGCGTTCATCGTGCTAAGCCTCCCATGCGCGTGTTACATCAATGTCCTGTCTGTCACAAAAAGTTCACAAATGCGCTTGTTTTGCAGCAGCACATCCGGCTACACACAGGTGAGCCAACGGATCTTACTCCCGAGCAAATTCAAGCCGCAGAAATCAAGGAATATCCTCCTCCCGTCGCCTTTCCCTTGCCTAACTCAATGAGCCCATTTTTAGCAGCAGCGCAAGGATTTCCACTTCCTGGCGTTTCCCCTTTGCCTCCGCCAGGACTTCATCTCGGCTTGAAGTCAGATTTTGAAGACAAACGCGATCGAGACAAAGACAAATCCGACTTCCTGGATGATGAAAACACTAACAGCAGCGGCGGTGTAGGTAGCAGCACTCCACAACAGCAATTGCCGTCCTTTTCCACATCTCTGGCAGCTCTTGAAAACCAGGTAAGAACCATAACCACAATGGCGTCTCAGCTCTCCGCGTCGGGACTAAGTCGTGCCGAGGAGGATATGGGCGGCAAGAATTCACCCGCGCAACCAAATTCGGTACAGCCGATAAATGGAGACAAATCCCCCACTCCTGTTCAACCTATTGGAAGCCCTAGTGAATCGGAAGTTCAAGCCTCGCTGTCACCTCAGCCTTTGGGAGGACCGCCAATATCACGGCCACCGTCTTCACAGCAACAGCCGCAGCCGGCCAACAGTCCGGCACCTTCCGAGTCCAACTCTTTGGGAGCCCTGGACCTCACGCCGAGGGGAGCATCTGCACCTTGCCACAGTCCGGCCCCTCCGCCACCTCCGCCACCAGCGAGTCTCTTCCCCGGGTTTGGTCTTCTTCCTCCGGCTTCTATTGCAGCAGGATCTTCGCCTCTGATGACGTCGGCCCTTTCGTCCCTCACCTCGTCAGTTCTTACGTCCACAGCATTCAGCCCTATCGGACTAGCAGTTGGGCCGGCAGTGCGACCAGGGAACACAACGTGCAACATCTGCTTCAAGACGTTTGCCTGCAACTCGGCGTTGGAGATCCATTATCGTAGCCACACCAAGGAAAGACCCTTCAAGTGCACCGTCTGCGACAGGGGTTTCTCCACAAAGgGGGATTCAGACTCACTCCAAACCCATCCAAACCATGATACATACTGTGAACACCTGGGTCAGTGGCGTATCAAGCAGGGGGACCATAGTGGAGGCTACAGGGGGGCCATTCACTCTGTCCAGGGTAAAAGAGTGAGAAAGCGAAATGAAGCGAGTAGGAATAATGGATGTGGAAAGAAGTATGCTGCTAGGCTGCCCCCTCTGCTATGCAACCCTGGATACGCCGCTGACTGGACCCACCTCTTGgGAAATATGAAGCAGCATATGCTTACACATAAGATCAGGGACATGCCATCTCACTTATTTGAAACCAGCAAACCACCTCCTCCACCAGTAAGTACAGCAAATGATGAAGGAAGCAACTCTGAAGATATACGTACTTCTTCCACACTTGAAACTTCAATGAAACCAGATCTAGGAGTGAAGAGATCTCCACCAGAAGGGGAAGGAGTACTGCCTATTCCAAAAAGACAACCTGGCTTACCAAAACACTTGTGCCATGTTTGCAATAAGAACTTCTCATCCTCATCAGCACTGCAGATACACATGCGCACTCATACTGGGGACAAGCCCTTCAGGTGTACAATCTGTCAAAAAGCTTTCACCACTAAGGGCAATCTTAAGGTCCATATGGGAACTCACATGTGGAGCAATGGAGCCTCTCGCCGGGGTCGTCGAATGTCTTTGGATCTGCCACCAATTCCAATGACACCCAAGGATTCAGAATTTCTACAGAGGAGACCAGATCTTTTTTACCCTTATCTGCCAGCCCCATTTCTGAATGGCATGCAACAGAAGctGAATGAGATTTCAGTAATACAGAGCGTGAACAGTAGCAGTCCGCCAGGAGGAAAATATGGCAGTCTATTAGGGTTTGGAGGATATGGTGGATCAGAAAAGCACCTCGTGTCTGAACCCCCAAGATCACAGCCCAGTTCACCCCTGTCGGACAAGCCCCCATCATCTGTGTCTTCACCACCACCTCTGTCCTTGTCTCTTGGCAGTCATCATGGATCACCACCACTTAGGGAACCCAGTGGGACTGAGGGTCCAGAGAGAGAGCCTACACCTAGGAATGTGTGGGATATGCACTATGAAAGAAAACCAGCTAGTGGGAGCAGTGAGGATCCTGTGGGTACATCACCATCACCCCCTGGACACGTAACACCACATCCCCCCTCAGCCACCAGAGGTGAAGGTCTGGCTGCATGA
Protein Sequence: MAEVNSSSVAYCGGWRMLNYLLKLGESSASGSEDEGGGGTGEAEGARRPSISTEEHICGICQTEFLDISEYIEHKKECCGALPSSAEDEEEEDEEGEGGEKVRRQRQDVENNNDSDLQQDDGETPPLTGFPFTLPPVPAAAPGHVTLEALQNTKVAVAQFAATAMANNADNAAALQELAVLQSTLFTLQHQQVMQLSLIQQLQQQLQITRSKEGSPVSPPPQPPTPVLPPQPAKTLAPNTRPSSPVTIKQEPSPPPASQSVPPTQSTSLPPTQQPSSSGSITSLAAATSTPSSSSPSTVVSVSSSVAGSIQPLPPKTTSPVQAPPPPPPPLSMCSISSTLASSIITNPDPPPLNEPNTLEMLQRRAQEVLDNASQGLLANNLADELAFRKGGGKSGSSLSPYDSKSGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHIKMNPNPVPEHLDKYHPPLLAQIGQHQSMSPGAGLPPHHHHHPHHPPPPPPAPHHSSHPHHSFHPSGNSGSSFPPTGLPLYRPPPPPHELMSHLHQPPPVPPHRPPPHEPPAPPPPLPKPPLLQHPVSALFGTQEVPENLSKPSHSPEQRYKKEPMEENDSESNRETSSPTRRLQSPKQEPETDQEQEGGDIEMSEIERYQPSPSPYDECSLDSKYSNEDMLMGEPDSPLDKNEDSLQEQPENLSSKSASITSSVGQRLPPSIPFPHTAVSPPSSTSSGSMNTLHTPVGPISLPNDVDPAKDPAIYTNLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEIKEYPPPVAFPLPNSMSPFLAAAQGFPLPGVSPLPPPGLHLGLKSDFEDKRDRDKDKSDFLDDENTNSSGGVGSSTPQQQLPSFSTSLAALENQVRTITTMASQLSASGLSRAEEDMGGKNSPAQPNSVQPINGDKSPTPVQPIGSPSESEVQASLSPQPLGGPPISRPPSSQQQPQPANSPAPSESNSLGALDLTPRGASAPCHSPAPPPPPPPASLFPGFGLLPPASIAAGSSPLMTSALSSLTSSVLTSTAFSPIGLAVGPAVRPGNTTCNICFKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKGDSDSLQTHPNHDTYCEHLGQWRIKQGDHSGGYRGAIHSVQGKRVRKRNEASRNNGCGKKYAARLPPLLCNPGYAADWTHLLGNMKQHMLTHKIRDMPSHLFETSKPPPPPVSTANDEGSNSEDIRTSSTLETSMKPDLGVKRSPPEGEGVLPIPKRQPGLPKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKLNEISVIQSVNSSSPPGGKYGSLLGFGGYGGSEKHLVSEPPRSQPSSPLSDKPPSSVSSPPPLSLSLGSHHGSPPLREPSGTEGPEREPTPRNVWDMHYERKPASGSSEDPVGTSPSPPGHVTPHPPSATRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01410972;
90% Identity: iTF_01410972;
80% Identity: -