Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060837.1:21232179-21233606[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00082 0.1 14.9 3.9 5 23 79 97 76 97 0.92

2 14 4.6e-06 0.00056 22.0 2.1 1 23 103 125 103 125 0.98

3 14 9.5e-07 0.00012 24.1 3.4 1 23 131 153 131 153 0.99

4 14 0.0057 0.69 12.3 0.1 1 23 159 181 159 181 0.98

5 14 8.3e-06 0.001 21.2 0.8 3 23 189 209 187 209 0.95

6 14 7.5e-06 0.00092 21.3 0.2 1 23 215 237 215 237 0.97

7 14 1.4e-05 0.0016 20.5 7.3 1 23 243 265 243 265 0.98

8 14 5e-06 0.00061 21.9 0.6 3 23 273 293 272 293 0.99

9 14 8.7e-05 0.011 18.0 3.8 1 23 299 321 299 321 0.97

10 14 0.0002 0.024 16.8 4.5 1 23 327 349 327 349 0.97

11 14 1e-05 0.0012 20.9 0.1 1 23 355 377 355 377 0.98

12 14 1e-06 0.00012 24.0 0.1 1 23 383 405 383 405 0.97

13 14 7.4e-06 0.0009 21.3 0.6 1 23 411 433 411 433 0.98

14 14 0.00018 0.022 17.0 5.3 1 23 439 461 439 461 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00082	0.1	14.9	3.9	5	23	79	97	76	97	0.92
2	14	4.6e-06	0.00056	22.0	2.1	1	23	103	125	103	125	0.98
3	14	9.5e-07	0.00012	24.1	3.4	1	23	131	153	131	153	0.99
4	14	0.0057	0.69	12.3	0.1	1	23	159	181	159	181	0.98
5	14	8.3e-06	0.001	21.2	0.8	3	23	189	209	187	209	0.95
6	14	7.5e-06	0.00092	21.3	0.2	1	23	215	237	215	237	0.97
7	14	1.4e-05	0.0016	20.5	7.3	1	23	243	265	243	265	0.98
8	14	5e-06	0.00061	21.9	0.6	3	23	273	293	272	293	0.99
9	14	8.7e-05	0.011	18.0	3.8	1	23	299	321	299	321	0.97
10	14	0.0002	0.024	16.8	4.5	1	23	327	349	327	349	0.97
11	14	1e-05	0.0012	20.9	0.1	1	23	355	377	355	377	0.98
12	14	1e-06	0.00012	24.0	0.1	1	23	383	405	383	405	0.97
13	14	7.4e-06	0.0009	21.3	0.6	1	23	411	433	411	433	0.98
14	14	0.00018	0.022	17.0	5.3	1	23	439	461	439	461	0.97

Sequence Information

Coding Sequence: atgaatgcAGATCTGTTGGAGGACATAAGGCTTTCAGACAGAATCATCACAAGGAAGAAGACAGTGAATGAAAACACAACTTCAGCAAATAAATCTGATGTTGCAACTAAAAAGTCTGATTCTGTAGAAGTTATGTCCCAGATAACTAATGCCCAGATAACAACCCTACTACTTCAGACATCAAGAAGAGGTAAATCAGTTGCAAAGCTTAGTGAAACAACTCCAACTTGTATCCTGTGCAAAAAGACATTTTCTAATCGAACACATTTAAATTCTCACATTAAATTGCATGCAGGTGTCAAACCCCATGAGTGCAATACATGTTCCAAAAAATTTGCTAGAAAAGGTGATTTGGCTATCCATCAACGTCGACATACTGGTGAACGTCCCTATGAATGTCCTACATGCAAAAAGACCTTTGTAGAAAAATCTCACCTTTTACGTCACACTCGAAGTCATACAGGTGATAAACGCCATACTTGCCCTGTGTGTGGAAGTGCATTCTTGGAACGGGCAGGACTTGCAAAACACCTCCGATCTCATACCGGTGAACGTCCTCATTTGTGCTCTGTATGTGGTAAGTCATTTGCTCAAAGAGAGTTTTTGATACGTCATGCTCGCATTCATACAGGTGAACGACCATTCCCTTGTGATATGTGTGGCAAGTCATTTTCTGATCGGTCAACAGCTGTAAAGCATGCTCGTTTACATACAGGATTGCGTCCCTTTCCATGCCATTTGTGTGGACGTTGCTTTTCACAGAAACAACATTTGACAGGGCATTTAAAGACACATGCAGGGGAACGGCCTCATGGGTGTGATATGTGTGGAAAGAAATTTGGACGTAAAAGTGATCTTGTTGTGCATACTCGTCGCCATACTGGAGAGCGTCCTCATAAGTGTGAAGAATGTGGGAAGACATTTCTAGACCGTTCACACCTTGTTCGACACAATAAGGTGCATAGCGGAGCAAAGCCGCATGTTTGTCATGTATGTGGTCGGTGTTTTGCGGAAAAGGGACATTTGGATGGACATTTGCGTGTCCACACTGGTGAGAAACCATATTCGTGTGATGTATGCTCCAGGAGTTTTGCAGATAGAGGAACCTTAGTGAATCATGTACGGGTTCATACTGGTGAGCGTCCTTTTGCTTGTCCCATCTGTACAAAGGCATTTGCACAGAAGGGGTCACTGCTCAAGCATGTGCGCATTCATTCAGGTGAAAGACCATATGTGTGCTCTGTGTGTGGTAAGCGATTTGCAGACAAGGGCTATTTTGTGAAACATTCTCGTCTTCACACAGGGGAAAATTTGCACACTTGTGCTCTCTGTGGCAAATTTTTTGCTCAAAAGTGCCATCTTATCAGACATGCAAAAGTTCATGGAGTTCAACCAGAAACAGTGATCATGCCTGTGGTaactatttaa
Protein Sequence: MNADLLEDIRLSDRIITRKKTVNENTTSANKSDVATKKSDSVEVMSQITNAQITTLLLQTSRRGKSVAKLSETTPTCILCKKTFSNRTHLNSHIKLHAGVKPHECNTCSKKFARKGDLAIHQRRHTGERPYECPTCKKTFVEKSHLLRHTRSHTGDKRHTCPVCGSAFLERAGLAKHLRSHTGERPHLCSVCGKSFAQREFLIRHARIHTGERPFPCDMCGKSFSDRSTAVKHARLHTGLRPFPCHLCGRCFSQKQHLTGHLKTHAGERPHGCDMCGKKFGRKSDLVVHTRRHTGERPHKCEECGKTFLDRSHLVRHNKVHSGAKPHVCHVCGRCFAEKGHLDGHLRVHTGEKPYSCDVCSRSFADRGTLVNHVRVHTGERPFACPICTKAFAQKGSLLKHVRIHSGERPYVCSVCGKRFADKGYFVKHSRLHTGENLHTCALCGKFFAQKCHLIRHAKVHGVQPETVIMPVVTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00434988;
90% Identity: iTF_00434988; iTF_00821158;
80% Identity: -