Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060837.1:3662958-3671840[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2e-07 2.4e-05 26.3 1.6 1 23 56 78 56 78 0.96

2 14 3.6e-06 0.00044 22.3 2.9 1 23 84 106 84 106 0.98

3 14 0.00018 0.022 17.0 0.7 1 23 112 134 112 134 0.97

4 14 2e-08 2.5e-06 29.4 0.6 1 23 140 162 140 162 0.99

5 14 8.4e-08 1e-05 27.5 1.7 1 23 168 190 168 190 0.98

6 14 4.5e-06 0.00055 22.0 2.4 1 23 196 218 196 218 0.96

7 14 1.2e-06 0.00015 23.8 2.8 1 23 224 246 224 246 0.98

8 14 1.2e-05 0.0014 20.7 0.7 1 23 252 274 252 274 0.98

9 14 2.1e-05 0.0026 19.9 2.0 1 23 280 302 280 302 0.97

10 14 2.2e-06 0.00027 23.0 1.8 1 23 308 330 308 330 0.96

11 14 2.8e-05 0.0034 19.5 0.5 1 23 336 358 336 358 0.97

12 14 1.1e-06 0.00014 23.9 3.6 1 23 364 386 364 386 0.98

13 14 6.8e-07 8.2e-05 24.6 2.1 1 23 392 414 392 414 0.98

14 14 5.9e-06 0.00071 21.7 8.6 1 23 420 442 420 442 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2e-07	2.4e-05	26.3	1.6	1	23	56	78	56	78	0.96
2	14	3.6e-06	0.00044	22.3	2.9	1	23	84	106	84	106	0.98
3	14	0.00018	0.022	17.0	0.7	1	23	112	134	112	134	0.97
4	14	2e-08	2.5e-06	29.4	0.6	1	23	140	162	140	162	0.99
5	14	8.4e-08	1e-05	27.5	1.7	1	23	168	190	168	190	0.98
6	14	4.5e-06	0.00055	22.0	2.4	1	23	196	218	196	218	0.96
7	14	1.2e-06	0.00015	23.8	2.8	1	23	224	246	224	246	0.98
8	14	1.2e-05	0.0014	20.7	0.7	1	23	252	274	252	274	0.98
9	14	2.1e-05	0.0026	19.9	2.0	1	23	280	302	280	302	0.97
10	14	2.2e-06	0.00027	23.0	1.8	1	23	308	330	308	330	0.96
11	14	2.8e-05	0.0034	19.5	0.5	1	23	336	358	336	358	0.97
12	14	1.1e-06	0.00014	23.9	3.6	1	23	364	386	364	386	0.98
13	14	6.8e-07	8.2e-05	24.6	2.1	1	23	392	414	392	414	0.98
14	14	5.9e-06	0.00071	21.7	8.6	1	23	420	442	420	442	0.98

Sequence Information

Coding Sequence: ATGACAAGTGAAAGCAAAGTGGATTGCCAAATAGCAATTAAAGAAGAACCCCTTAATTGTGATGCAAATTCAATAGAGTTGGAACATGAAAATCAGGAAGAGGATTGGTATGATACTGAATTAAAGCAAGAGatacatcttttgattcatgaaggaaagaaaccacataaatgtgaagtttgtggtaagagctttaccAGGTCATCTACTTTGAAGGAACATCTTTTGGCTCATGAGGGtaggaaaccacataaatgtgaagtttgtaggAAGAGCTTTATCTATAGATCTACCTTGAAGAggcatattttgattcatgagtgtaagaaaccacataaatgtgaagtttgtgggaagagttttatcTATGGCTCTATATtgaggagacatcttttgattcatgaatataacaaaccatataaatgtgaaatttgtgggaagagttttattCAGTCATCTACTTTGAAGGAACATCTTTTGACTCATGATGGtaggaaaccacataaatgtgaagtttgtggtaagagctttactCAGTCATCTACATTGAAGGAACATCTTATGATTCACGAGGGtaggaaaccacataaatgtaaagtttgtgagaagagctttacgcGGTTATCCACTTTGAAGGAACATCTTTTGGCTCACGAGGGtaggaaaccacataaatgtgaagtttgtaggAAGAGCTTTACCCGGGCATCTACATTGAAGGAACATCTTTTGACTCATGAGGGAgggaaaccacataaatgtgaagtttgtggagaGACCTTTATCTATGGATCTACCTtgaagagacatcttttgattcatgagtgTAAGAAACCCCATAAATgcaaagtttgtggaaagagctttaatTGGGCATCTAACTTAAAACAACATCTTTTCATTCATGAGCATAAGAAACCACATATATgcgaagtttgtgggaagagctttatccgGGCATTTCATTTGAGACAacaccttttgattcatgaaggtaagaaatcACATCAATGTAAAACTTGTGGAAAGGCCTTTACCTGGGCATCTAATTTAATTGAACACCTTTcaattcatgaaggtaagaaacaacataaatgtgaagtttgtgagaagagctttacccatGCTTCTACATtgaagagacatcttttgattcatgataGCAAGAGAccccataaatgtgaaatttgtgagaagagctttactcaggTATCTACCTTGAAGAGACATCTAATGATTCATGAGAGTAAgaaacctcataaatgtgaattttgtgggaagagctttacccattCATCTTCCTTGAAAAGACATCATTTGATGCATGAGCGcaagaaaaaacattaa
Protein Sequence: MTSESKVDCQIAIKEEPLNCDANSIELEHENQEEDWYDTELKQEIHLLIHEGKKPHKCEVCGKSFTRSSTLKEHLLAHEGRKPHKCEVCRKSFIYRSTLKRHILIHECKKPHKCEVCGKSFIYGSILRRHLLIHEYNKPYKCEICGKSFIQSSTLKEHLLTHDGRKPHKCEVCGKSFTQSSTLKEHLMIHEGRKPHKCKVCEKSFTRLSTLKEHLLAHEGRKPHKCEVCRKSFTRASTLKEHLLTHEGGKPHKCEVCGETFIYGSTLKRHLLIHECKKPHKCKVCGKSFNWASNLKQHLFIHEHKKPHICEVCGKSFIRAFHLRQHLLIHEGKKSHQCKTCGKAFTWASNLIEHLSIHEGKKQHKCEVCEKSFTHASTLKRHLLIHDSKRPHKCEICEKSFTQVSTLKRHLMIHESKKPHKCEFCGKSFTHSSSLKRHHLMHERKKKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00995377;
90% Identity: iTF_00995377;
80% Identity: iTF_00995377;