Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060833.1:67861470-67863233[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0031 0.38 13.1 0.8 3 23 26 46 24 46 0.96

2 20 0.61 74 5.9 0.0 6 17 57 68 56 69 0.92

3 20 1.1e-06 0.00013 23.9 0.9 1 23 80 102 80 102 0.96

4 20 2.9e-05 0.0035 19.5 0.7 1 23 108 130 108 130 0.98

5 20 4.6e-06 0.00056 22.0 1.9 1 23 136 158 136 158 0.98

6 20 8.3e-07 0.0001 24.3 0.8 1 23 164 186 164 186 0.98

7 20 7.5e-06 0.00091 21.3 1.0 1 23 192 214 192 214 0.98

8 20 0.00016 0.02 17.1 1.8 1 23 220 242 220 242 0.97

9 20 9.8e-07 0.00012 24.1 0.9 1 23 248 270 248 270 0.96

10 20 7e-06 0.00085 21.4 1.3 1 23 276 298 276 298 0.97

11 20 5e-06 0.0006 21.9 3.5 1 23 304 326 304 326 0.97

12 20 8.1e-05 0.0098 18.1 0.5 1 23 332 354 332 354 0.97

13 20 4.5e-07 5.4e-05 25.2 0.4 1 23 360 382 360 382 0.97

14 20 1.6e-05 0.0019 20.3 3.5 1 23 388 410 388 410 0.97

15 20 5e-06 0.00061 21.9 0.6 1 23 416 438 416 438 0.98

16 20 2.3e-06 0.00028 22.9 1.2 1 23 444 466 444 466 0.98

17 20 1.8e-05 0.0022 20.1 2.3 1 23 472 494 472 494 0.98

18 20 0.0023 0.28 13.5 2.6 1 20 500 519 500 522 0.92

19 20 4.8e-07 5.8e-05 25.1 0.7 1 23 528 550 528 550 0.97

20 20 7.3e-07 8.9e-05 24.5 0.5 1 23 556 578 556 578 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0031	0.38	13.1	0.8	3	23	26	46	24	46	0.96
2	20	0.61	74	5.9	0.0	6	17	57	68	56	69	0.92
3	20	1.1e-06	0.00013	23.9	0.9	1	23	80	102	80	102	0.96
4	20	2.9e-05	0.0035	19.5	0.7	1	23	108	130	108	130	0.98
5	20	4.6e-06	0.00056	22.0	1.9	1	23	136	158	136	158	0.98
6	20	8.3e-07	0.0001	24.3	0.8	1	23	164	186	164	186	0.98
7	20	7.5e-06	0.00091	21.3	1.0	1	23	192	214	192	214	0.98
8	20	0.00016	0.02	17.1	1.8	1	23	220	242	220	242	0.97
9	20	9.8e-07	0.00012	24.1	0.9	1	23	248	270	248	270	0.96
10	20	7e-06	0.00085	21.4	1.3	1	23	276	298	276	298	0.97
11	20	5e-06	0.0006	21.9	3.5	1	23	304	326	304	326	0.97
12	20	8.1e-05	0.0098	18.1	0.5	1	23	332	354	332	354	0.97
13	20	4.5e-07	5.4e-05	25.2	0.4	1	23	360	382	360	382	0.97
14	20	1.6e-05	0.0019	20.3	3.5	1	23	388	410	388	410	0.97
15	20	5e-06	0.00061	21.9	0.6	1	23	416	438	416	438	0.98
16	20	2.3e-06	0.00028	22.9	1.2	1	23	444	466	444	466	0.98
17	20	1.8e-05	0.0022	20.1	2.3	1	23	472	494	472	494	0.98
18	20	0.0023	0.28	13.5	2.6	1	20	500	519	500	522	0.92
19	20	4.8e-07	5.8e-05	25.1	0.7	1	23	528	550	528	550	0.97
20	20	7.3e-07	8.9e-05	24.5	0.5	1	23	556	578	556	578	0.98

Sequence Information

Coding Sequence: ATGGAACCTTCAATTGGCCATTTTGTTGATATTACTCTGGAAAGTAAAGACAACACGAAAAGCCAGGTATTGTTCTGCAAATTTTGTGCCAGCACTTTTACTAGCTATTCATCTTTGAAAGAACATATATTGATTCATGAAAACAAGAGAAATGATATAATCCAAGCTTGTGGAAAAAGTTTTCCTCGGGCATCAACTTTGAGTAACAATAGTTTGATTCTTAAAAGCAAGAAGCTCCATAATTGTGAAGTCTGTGGGAAGATCTTTACCAAGGCATCTAATTTGAAGAGTCATCTTTTAATACATGAAGGCAAGAAgccccataaatgtgaaatttgtggaaatagttttatcctagcatcttatttgaggaaacatcttttgattcatgaaggcaagaagccacataagtgtgaagtttgtggaaagagctttactcaAGGATTCACTTTAagaagacatcttttgattcatgagagcAGGAAACAttataagtgtgaagtttgtggaaaggaCTTTACCCAGGCATTTACTCTAAAGAAACATCTTTCAGTTCATGAAAGCAATAGTtcccataaatgtgaagtttgtggggaGAGCTTTACCCAGGAATTGACATTGAAAAGACATCTcctgattcatgagggcaagaaactaTATAATTGTGAACTTTGTGCGAAGAGCTTTACCAATCCATTCCATTTGAGGGACcattttttgattcatgagggaaagaagccccataagtgtgaagtttgtgggaagagctttacacagGCATCTAATTTGAGAGGTCATtctttgattcatgagggcaaaaagccacataaatgtgaaatttgtgggaagagctttacaaaagcattcactttaaggggacatcttttgattcatgagggtaagaaaccccataggtgtgaaatttgtggaaagagtttcACGCAGGTATCTACTCTAAGGACACATCATTTAATTCATGATGGCACAAAGccccataagtgtgaaatttgtggtaagAGGTTTACCCTGACAGGTGTTTTAAAGGCACATTtattgattcatgagggcaagaaaccacatgAGTGTGAAATCTGTGGAAAGGGTTTTACAACAATGTCTAATTTGAGGgtgcatcttttgattcatgagggcaagaaattgcatgaatgtaaaatatgtggaaagAATTTTAATCACATATCTAATTACAGGAGACatgttttgattcatgagggtatgAAGCCATATAAATGTAAAGTCTGCGGGAAATTCTTTACCAAGGGATCTACTTTGAATGCTCATGtcttgattcatgagggcaaaaaaccacataaatgtgaagtctgTGGGAAACAATTTACTCTGTTATCCAATTTGAGGACACACATTTTGATTCATGATggtaagaaaaaacataaatgtacAATTTGTGGGAAGGGCTTTAATCACATATCTAATATGAAaatacatcttttgattcatgagggtaaaaagcctcataattgtgaaatttgtggaaaacaGTTTACTGCAAAATGTAACTTAAGAGAACATCGTTGGATTCACGAGGGTAAGAAGCCTCATAGGTGTGATAtatgtgggaagagctttactcaggcaTCAACTTTGAggggacatcttttgattcatgagggcaagaagccctATAAATGTGAAGTCTGTGAAAAGGGCTTTACCAAAGCATcttatttaaagaaacatatattgATTCACAAGGGCAAGGGCAAGAAGCCATGTAAATGA
Protein Sequence: MEPSIGHFVDITLESKDNTKSQVLFCKFCASTFTSYSSLKEHILIHENKRNDIIQACGKSFPRASTLSNNSLILKSKKLHNCEVCGKIFTKASNLKSHLLIHEGKKPHKCEICGNSFILASYLRKHLLIHEGKKPHKCEVCGKSFTQGFTLRRHLLIHESRKHYKCEVCGKDFTQAFTLKKHLSVHESNSSHKCEVCGESFTQELTLKRHLLIHEGKKLYNCELCAKSFTNPFHLRDHFLIHEGKKPHKCEVCGKSFTQASNLRGHSLIHEGKKPHKCEICGKSFTKAFTLRGHLLIHEGKKPHRCEICGKSFTQVSTLRTHHLIHDGTKPHKCEICGKRFTLTGVLKAHLLIHEGKKPHECEICGKGFTTMSNLRVHLLIHEGKKLHECKICGKNFNHISNYRRHVLIHEGMKPYKCKVCGKFFTKGSTLNAHVLIHEGKKPHKCEVCGKQFTLLSNLRTHILIHDGKKKHKCTICGKGFNHISNMKIHLLIHEGKKPHNCEICGKQFTAKCNLREHRWIHEGKKPHRCDICGKSFTQASTLRGHLLIHEGKKPYKCEVCEKGFTKASYLKKHILIHKGKGKKPCK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -