Basic Information

Insect: Metallyticus violacea
Gene Symbol: -
Assembly: GCA_030762175.1
Location: CM060830.1:30355636-30357318[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.3 37 6.8 0.6 1 23 4 26 4 26 0.96

2 20 3e-07 3.6e-05 25.7 3.7 1 23 32 54 32 54 0.98

3 20 8.7e-06 0.0011 21.1 1.8 1 23 60 82 60 82 0.97

4 20 2.6e-05 0.0031 19.6 1.0 1 23 88 110 88 110 0.97

5 20 4.9e-06 0.0006 21.9 3.7 1 23 116 138 116 138 0.98

6 20 6.1e-07 7.4e-05 24.7 0.9 2 23 145 166 144 166 0.97

7 20 2.7e-07 3.2e-05 25.9 2.2 1 23 172 194 172 194 0.97

8 20 1.4e-06 0.00017 23.6 0.2 1 23 200 222 200 222 0.98

9 20 2.5e-07 3e-05 26.0 3.3 1 23 228 250 228 250 0.98

10 20 0.00012 0.014 17.5 2.5 1 23 256 278 256 278 0.96

11 20 3.9e-07 4.8e-05 25.4 2.2 1 23 284 306 284 306 0.98

12 20 1.3e-07 1.6e-05 26.8 2.3 1 23 312 334 312 334 0.98

13 20 2.3e-05 0.0029 19.8 1.0 1 23 340 362 340 362 0.98

14 20 1.2e-05 0.0015 20.6 3.5 1 23 368 390 368 390 0.98

15 20 2.8e-07 3.4e-05 25.8 1.6 1 23 396 418 396 418 0.98

16 20 0.0004 0.049 15.9 1.5 1 23 424 446 424 446 0.98

17 20 7e-06 0.00085 21.4 1.6 1 23 452 474 452 474 0.98

18 20 7.4e-07 9e-05 24.5 1.8 1 23 480 502 480 502 0.98

19 20 5.4e-06 0.00066 21.8 2.6 2 23 509 530 508 530 0.97

20 20 2.1e-05 0.0025 19.9 0.7 1 23 536 558 536 558 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.3	37	6.8	0.6	1	23	4	26	4	26	0.96
2	20	3e-07	3.6e-05	25.7	3.7	1	23	32	54	32	54	0.98
3	20	8.7e-06	0.0011	21.1	1.8	1	23	60	82	60	82	0.97
4	20	2.6e-05	0.0031	19.6	1.0	1	23	88	110	88	110	0.97
5	20	4.9e-06	0.0006	21.9	3.7	1	23	116	138	116	138	0.98
6	20	6.1e-07	7.4e-05	24.7	0.9	2	23	145	166	144	166	0.97
7	20	2.7e-07	3.2e-05	25.9	2.2	1	23	172	194	172	194	0.97
8	20	1.4e-06	0.00017	23.6	0.2	1	23	200	222	200	222	0.98
9	20	2.5e-07	3e-05	26.0	3.3	1	23	228	250	228	250	0.98
10	20	0.00012	0.014	17.5	2.5	1	23	256	278	256	278	0.96
11	20	3.9e-07	4.8e-05	25.4	2.2	1	23	284	306	284	306	0.98
12	20	1.3e-07	1.6e-05	26.8	2.3	1	23	312	334	312	334	0.98
13	20	2.3e-05	0.0029	19.8	1.0	1	23	340	362	340	362	0.98
14	20	1.2e-05	0.0015	20.6	3.5	1	23	368	390	368	390	0.98
15	20	2.8e-07	3.4e-05	25.8	1.6	1	23	396	418	396	418	0.98
16	20	0.0004	0.049	15.9	1.5	1	23	424	446	424	446	0.98
17	20	7e-06	0.00085	21.4	1.6	1	23	452	474	452	474	0.98
18	20	7.4e-07	9e-05	24.5	1.8	1	23	480	502	480	502	0.98
19	20	5.4e-06	0.00066	21.8	2.6	2	23	509	530	508	530	0.97
20	20	2.1e-05	0.0025	19.9	0.7	1	23	536	558	536	558	0.98

Sequence Information

Coding Sequence: ATGAAGTCACATAATTGCGAAGTTTGTGAGCAGAGTTTACTCAAAGCATCTAATATGAGGCAGCATCTTTTGGTTCATGAGGGCAAGGAGcagcataaatgtgaagtttgtgggaagtgCTTTACCCAGCCAAAAAATTTGAGAcagcatcttttaattcatgagggtaagatgccccataagtgtgaaatttgtggcaaAAGCTTTACACAGGCATATCGTTTAAGAGAACATTTCTTGGTTCATGAAGGTAAAAAGAGACATATGTGTGAAGTATGTGGCAATAGCTTTACTCATGCATCTGCATTAAGAatgcatcttttaattcatgagggcagaaagccacataagtgtgaggtttgtgggaagagctttactcattCTTTTACTTTGAGagaacatcttttaattcatgaaggaAGGAAGCCcaataagtgtgaagtttgtgggaagagctttactcatgCATCTACTTTAAGGATACATTTGTTGATTCATGAAGACAAGAAGCCTCACatgtgtgaagtttgtggcaagagctttaACAATTCatcaacattgaagaaacatcttttaatgcatgagggcaagaagccatataagtgtgaagtttgtggcaagagcTATGTTCTGGCATCAACATTGAAAcgacatcttttaattcatgagggtaagaagccacataagtgtgaagtttgtggcaagagctttacTCATGCATCTACGTTGAGGaagcatcttttaattcatgaaggcAAAAAGCCACATATGTGTGAAGTATGTGGGAAGAGCTTTGctcatttatttactttgagAGAACATCTTTTTATTCACGAAGGaaagaaaccacataagtgtgaagtttgtggaaagagctttacacaTGCATCCACTTTAAGAATACATTTGTTGATTCATGATGGCAAGAAGCTTCATAAGTGTgatgtttgtgggaagagctttaacaATTCATcaacactgaagaaacatcttttaattcatgatggCACAAAGtctcataaatgtgaagtttgtggtaagagctttacaTGGGCATCAAAATTGAGGCAGCACCTTTTAgttcatgaaggaaagaagccacataaatgtaaagtttgtgaaaAAAGCTTTACCCATACATCTGCTTTAAGAATTCATTTGTTAGTGCATGAAGGCAAGGAGTctcataagtgtgaaatttgtgggaagggTTTTAATAGTTCATCAACATTGAAGAAGCATCTTTTAATTCACCAGGGCAAGAAGCctcataagtgtgaagtttgtagCAAGAGATTTACATGGGCATCAACATTGAGGCAGCATCTTTTAGTTCACGAAGGcaaaaagccacataaatgtaaagtatgTGGTAATAAATTTACTGATGCATCTACTTTGAGgaatcatcttttaattcatgggGACAATAAGCTatataagtgtgaaatttgtggaaagaatttTACTCACTCATTTACTTTGAgagaacatattttaattcatgaagggAAGAAGCccaataaatgtgaattttgcgGAAAGAGCTTTACTCACGCACAAACTTTAAgaaaacatcttttaattcatgagaaCACAAAGCCCCATAAATGTCaagtttgtggtaagagctttatCCAAACATCTGGATTTATAGAACATCTATTGATTCATGAAGGCTAG
Protein Sequence: MKSHNCEVCEQSLLKASNMRQHLLVHEGKEQHKCEVCGKCFTQPKNLRQHLLIHEGKMPHKCEICGKSFTQAYRLREHFLVHEGKKRHMCEVCGNSFTHASALRMHLLIHEGRKPHKCEVCGKSFTHSFTLREHLLIHEGRKPNKCEVCGKSFTHASTLRIHLLIHEDKKPHMCEVCGKSFNNSSTLKKHLLMHEGKKPYKCEVCGKSYVLASTLKRHLLIHEGKKPHKCEVCGKSFTHASTLRKHLLIHEGKKPHMCEVCGKSFAHLFTLREHLFIHEGKKPHKCEVCGKSFTHASTLRIHLLIHDGKKLHKCDVCGKSFNNSSTLKKHLLIHDGTKSHKCEVCGKSFTWASKLRQHLLVHEGKKPHKCKVCEKSFTHTSALRIHLLVHEGKESHKCEICGKGFNSSSTLKKHLLIHQGKKPHKCEVCSKRFTWASTLRQHLLVHEGKKPHKCKVCGNKFTDASTLRNHLLIHGDNKLYKCEICGKNFTHSFTLREHILIHEGKKPNKCEFCGKSFTHAQTLRKHLLIHENTKPHKCQVCGKSFIQTSGFIEHLLIHEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -