Mvio000191.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Metallyticus violacea
Gene Symbol
-
Assembly
GCA_030762175.1
Location
CM060830.1:5041448-5074294[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 1.7e-05 0.002 20.2 3.3 1 23 185 207 185 207 0.98
2 26 1.4e-05 0.0017 20.5 2.8 3 23 215 235 214 235 0.96
3 26 3.9e-07 4.7e-05 25.4 1.0 1 23 241 263 241 263 0.98
4 26 2.3e-06 0.00027 23.0 1.9 1 23 269 291 269 291 0.98
5 26 1.1e-06 0.00013 24.0 1.0 1 23 297 319 297 319 0.98
6 26 6.6e-07 8e-05 24.6 0.4 1 23 325 347 325 347 0.98
7 26 3.6e-06 0.00044 22.3 1.1 1 23 353 375 353 375 0.98
8 26 0.00011 0.013 17.7 4.8 1 23 381 403 381 403 0.97
9 26 2.7e-07 3.3e-05 25.9 1.4 1 23 409 431 409 431 0.98
10 26 0.00015 0.018 17.2 1.4 1 23 437 459 437 459 0.97
11 26 9.6e-07 0.00012 24.1 1.1 1 23 465 487 465 487 0.97
12 26 1e-06 0.00012 24.1 1.0 1 23 493 515 493 515 0.98
13 26 9.5e-08 1.2e-05 27.3 0.4 1 23 521 543 521 543 0.98
14 26 2.5e-07 3.1e-05 25.9 1.2 1 23 549 571 549 571 0.98
15 26 7.4e-07 9e-05 24.5 2.0 1 23 577 599 577 599 0.98
16 26 0.00036 0.043 16.0 2.1 1 23 617 639 617 639 0.96
17 26 3e-06 0.00037 22.6 0.5 1 23 645 667 645 667 0.95
18 26 2e-06 0.00025 23.1 1.1 1 23 673 695 673 695 0.97
19 26 2.7e-06 0.00033 22.7 2.3 1 23 701 723 701 723 0.98
20 26 1.3e-06 0.00016 23.7 2.3 1 23 729 751 729 751 0.98
21 26 0.00028 0.034 16.4 0.4 1 17 757 773 757 774 0.94
22 26 2.3e-06 0.00028 22.9 0.6 1 23 785 807 785 807 0.98
23 26 7.9e-06 0.00096 21.2 2.0 1 23 813 835 813 835 0.95
24 26 1.2e-06 0.00015 23.8 0.4 3 23 843 863 842 863 0.97
25 26 0.00017 0.02 17.1 3.8 1 23 869 891 869 891 0.96
26 26 6.3e-06 0.00076 21.6 1.7 1 23 897 919 897 919 0.98

Sequence Information

Coding Sequence
atggttatcaaactagagaTTAAGGAAGAACTACCAGACCCTGATAAAGATGCAGGTGATTTCATATCCACATACAGTACTGCTCATGATGCTATATTGGAAAATGAGATAAAGTCTGAGAGGATGATAAATGAATGCAGTGAATATGAGAAAATGGATCCCAAATTAGAGCCCAAAAAAGATCCACTTGAGCTCAAATTCGAAATTGTAGAAGAGATCACAAATAATGACAAACTGGATACTTTGTTGAAGAGTGAGGTAAAGGAGCAGAAGGAGCCTGATGTAGCTTTAACGAAGGAGGAGATCACAATTGAGGAATCAGACTTATCATACAGTGATCCAGGGGGGATGAGATCAGTATACTGGTGCTCTGCTTCAACAAGACCAAAGAGCACCACATTTCCATACGGCAGCTCCCCAGTTATCCTCATGAGGACTTATGGCACCCAACTGCAGCAGTCATTATTTGAGCCTTATCTTATGGTTGCTGGGATATACCCAGGCCATCTTGGTGGGAGGATACATCttatgattcatgagggcaagaagccacataagtgtcaactttgtggaaagagttttacccaTGCAAATACTTTGAgagaacatcttttgattcatgaaggcaagaagCCAAATATGTGTCAtctttgtggaaagagttttacccaTGCAAGTGCTTTGAGAGCACATCGTTTCATTCATGAGgacaagaagccacataagtgtgaagtctgtggaaagagctttatccaAGCATCATATTTAAGGCAACATCttatgattcatgagggcaagaagccacacaagtgtgaagtttgtggaaaggaTTTTACCCAAACATCTTATTTGAcaagacatcttttgattcatgagggcaagaagccacataaatgtgaagtttgtggaaagagctttatacGAGCTTTTGATTTAAGGCAACATCttatgattcatgagggcaaaaagccccataagtgtgaagtttgtggaaagagctttatccaGGCATCTAATATGAgggcacatcttttgattcatgagggcaaaaagccgcataagtgtgaagtttgtggaaagagttttaccaATGGATCTTATTTGAtgcaacatcttttgattcatgagggcaagaagccacataggtgtgaagtttgtggaaagagctttacccatgCATCATGTGTGaggcaacatcttttgattcatgagggcaaaaagccccataagtgtgaagtttgtggtaagagctttaccAGTGCATCTTATTTGAAgcaacatcttttgatacatgagggcAAAAAGCCCTATAATTGTGAACTTTGTGCAAAGAGATTTACCCATGCATCTGGTTTGAGGCAACATCTTTTGAATCATCAGAGCAAAAAGtcccataagtgtgaagtttgtggaaaaagtTTTAACAATCCATCTTATTTGAGggcacattttttaattcatgagAACAAAAAgccccataaatgtgaagtttgtggaaagagttttattcGAGCATTTGATCTGAAGCAACATCttatgattcatgagggcaaaaagccccataagtgtgaagtttgtggaaagagctttattcAGGCATCTAATTTGAGGGCACATCTTTTGATCCATGAGGGCAAAAAgccccataagtgtgaagtttgcgGAAAGAGCTTTAGCAGTGCATCTTATTTGaggcaacatcttttgattcacgaggGCAAAAAGCCCcacaagtgtgaagtttgtggaaagagctttacccatgCATCTGGTTTGaggcaacatcttttgattcatcagGGCAAAAAACCCTTAAACCAtaatttgattcatgagggcaagaagccccataagtgtgaagtttgtggaaagaattTTACCCATTCAAATACTTTGGGGGCACATAGTTTGATTCATAAGAGCAAGAGACCACAtatgtgtgaagtttgtggaaagagctttaccgtTGCATCTAATTTATGGAAACATGTTTttattcatgagggcaagaacccgcataagtgtgaagtttgtggaaagagctttatccaAGCATATAATTTGAGGCTACATCTTTTTATTCATaagggcaagaaaccacataaatgtgaagtttgtggaaagagctttatccaAATATCACATTTGaggcaacatcttttgattcatgagggcaagaagtcacataagtgtgaagtttgtgggaagagttttattCACTCATCTTCTTTgagggaacatcttttgattcatgagggaagAAAGCCCCAtcagtgtgaagtttgtggaaagagctttaacCGAGCATCTTATTTGAAGCAACagcttttgattcatgagggtaaaaaactCTATAAGTGTGAactttgtggaaagagctttaccaaTGGTTCTTATTTAATGCAACATCTTTCGATTCATAAGGGCAAAAAgccccataagtgtgaagtttgtggaaagagctttatccgCTCATCTAATATGAGGgcacatttttttattcatgagggcaaaaaacccaataattgtaaagtttgtggaaagagttttaccaCTGCATCTTATTTGAGGGagcatcttttgattcatcagGGCAAAAAGCCGCATAACTGTGACgtttgtggaaagaactttacCCGTGCATGTACTTTGACGCAACATCGTTTGATTCATATAGGCAAAAAGCCCCATAAGTGTGaactttgtggaaagagttttaccaTAGTATCTTATTTGAGGAAGCATATGTTGATTCATAAGGATAAGAAGCCTCTTAAGTGA
Protein Sequence
MVIKLEIKEELPDPDKDAGDFISTYSTAHDAILENEIKSERMINECSEYEKMDPKLEPKKDPLELKFEIVEEITNNDKLDTLLKSEVKEQKEPDVALTKEEITIEESDLSYSDPGGMRSVYWCSASTRPKSTTFPYGSSPVILMRTYGTQLQQSLFEPYLMVAGIYPGHLGGRIHLMIHEGKKPHKCQLCGKSFTHANTLREHLLIHEGKKPNMCHLCGKSFTHASALRAHRFIHEDKKPHKCEVCGKSFIQASYLRQHLMIHEGKKPHKCEVCGKDFTQTSYLTRHLLIHEGKKPHKCEVCGKSFIRAFDLRQHLMIHEGKKPHKCEVCGKSFIQASNMRAHLLIHEGKKPHKCEVCGKSFTNGSYLMQHLLIHEGKKPHRCEVCGKSFTHASCVRQHLLIHEGKKPHKCEVCGKSFTSASYLKQHLLIHEGKKPYNCELCAKRFTHASGLRQHLLNHQSKKSHKCEVCGKSFNNPSYLRAHFLIHENKKPHKCEVCGKSFIRAFDLKQHLMIHEGKKPHKCEVCGKSFIQASNLRAHLLIHEGKKPHKCEVCGKSFSSASYLRQHLLIHEGKKPHKCEVCGKSFTHASGLRQHLLIHQGKKPLNHNLIHEGKKPHKCEVCGKNFTHSNTLGAHSLIHKSKRPHMCEVCGKSFTVASNLWKHVFIHEGKNPHKCEVCGKSFIQAYNLRLHLFIHKGKKPHKCEVCGKSFIQISHLRQHLLIHEGKKSHKCEVCGKSFIHSSSLREHLLIHEGRKPHQCEVCGKSFNRASYLKQQLLIHEGKKLYKCELCGKSFTNGSYLMQHLSIHKGKKPHKCEVCGKSFIRSSNMRAHFFIHEGKKPNNCKVCGKSFTTASYLREHLLIHQGKKPHNCDVCGKNFTRACTLTQHRLIHIGKKPHKCELCGKSFTIVSYLRKHMLIHKDKKPLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-