Mvio003164.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Metallyticus violacea
Gene Symbol
-
Assembly
GCA_030762175.1
Location
CM060830.1:107713781-107751192[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.033 4 9.9 0.5 1 23 206 228 206 228 0.96
2 28 0.00024 0.029 16.6 0.8 1 23 234 256 234 256 0.98
3 28 2.5e-06 0.0003 22.8 0.3 2 23 263 284 262 284 0.96
4 28 2.8e-06 0.00034 22.7 0.6 1 23 290 312 290 312 0.98
5 28 7.3e-07 8.9e-05 24.5 2.6 1 23 318 340 318 340 0.98
6 28 1.4e-05 0.0018 20.4 1.7 1 23 346 368 346 368 0.97
7 28 4.4e-07 5.4e-05 25.2 2.1 1 23 374 396 374 396 0.98
8 28 7.2e-06 0.00087 21.4 2.6 1 23 402 424 402 424 0.98
9 28 7e-05 0.0085 18.3 2.6 1 23 430 452 430 452 0.97
10 28 2.6e-07 3.2e-05 25.9 1.2 1 23 458 480 458 480 0.98
11 28 2.2e-05 0.0026 19.9 2.9 1 23 486 508 486 508 0.98
12 28 2.7e-06 0.00033 22.7 0.7 1 23 514 536 514 536 0.97
13 28 5.8e-06 0.00071 21.7 0.2 1 23 542 564 542 564 0.99
14 28 3e-07 3.6e-05 25.7 1.1 1 23 570 592 570 592 0.98
15 28 7.6e-05 0.0092 18.2 0.3 1 23 598 620 598 620 0.96
16 28 7.2e-08 8.8e-06 27.7 0.9 1 23 626 648 626 648 0.98
17 28 5.2e-06 0.00063 21.8 0.8 1 23 654 676 654 676 0.97
18 28 2.8e-05 0.0034 19.5 3.7 1 23 682 704 682 704 0.97
19 28 3.5e-07 4.3e-05 25.5 0.8 1 23 710 732 710 732 0.97
20 28 1.2e-06 0.00015 23.8 2.2 1 23 738 760 738 760 0.98
21 28 6.9e-08 8.4e-06 27.7 0.1 1 23 766 788 766 788 0.98
22 28 1.1e-05 0.0013 20.8 2.6 1 23 794 816 794 816 0.97
23 28 1.5e-06 0.00018 23.5 0.6 1 23 822 844 822 844 0.96
24 28 7.6e-08 9.3e-06 27.6 0.8 1 23 850 872 850 872 0.98
25 28 0.00039 0.047 15.9 2.1 1 23 878 900 878 900 0.97
26 28 5.5e-06 0.00067 21.7 0.9 1 23 906 928 906 928 0.96
27 28 7.6e-05 0.0092 18.2 4.4 1 23 942 964 942 964 0.96
28 28 4.6e-07 5.6e-05 25.1 0.6 1 23 970 992 970 992 0.98

Sequence Information

Coding Sequence
ATGGACTTAAAGCTAGAGATTAATGAAGAACCCCTGGACTATGATATGGCTTTGCTGGAGTTGAAACCAGAAACTGAGGAAGAAAGCTCCTGTAGTACTGCTCTAGACACTGAAGTAAAATCTTTGGAgatcataaataaaagtattgattATGAGAAATTGGGAATCAAACTAGAGACTAAGGAAGAACTGCTGGACCCTGTTGAAAATGCAGGTGATTTCATATCCAAAACTGTAGAGGAAAATTCATATAGCATTGCTCGTGATTCTATATTGGAAAATGAGATAAAGTCTGAGAGGATGATTATTGAATGCAGTGGCTATGAGAAAATGGATCCCAAATTAGAGTTCAAGGACGCAAACAAAGATCCACTTGAGCTCAAATTCAAAACTGTAGAAGAGATTGCAAATAATGATGGTCAGGATACATTATTGAAGAAGGAAATAAAGGAGCAGAAAGAGCCTGACATAGCTTTAATGAAGGAGGACATCACAATTGAGGAATCAGACTTTACATACAGTGATCCAGGgGCTCACTTGGGAGACCTATCCATGTATATGGATAATTCATCTACTACTTATATTGAAAGTAAAGACAACAAAAAGAAGCAGgaatttaagtgtatattttgtGAAACTATCTTCATTGacacttcatctttaagagaCCATTTATTAAGTCACGActctgaaaaagaatataaatgcaaattctgTGGAGAACATTTTACGCAGGCATCAGTCTGGTTAaaccatattttgattcatgaggataaAAAACGCCTTGAATGTGAACTTTGTGGAAAGATTTTTACCCAGACATCATCTTtgaggagacatcttttgattcatcagggcaagaagccacataagtgtgaagtttgtggaaagagttttacccTTGCATCTACTTTGAgggtacatcttttgattcatgagggcaagaagccacataaatgtgaagtttgtggaaaaagctTTACCCATCTATCTACTTTGAAGGCACATATTTCAATTCATGGGGTCAAAAAGtcccataagtgtgaagtttgtggaaaaagtTATAACTATGCGTCATCTTTGAGGCaacatctttttattcatgagggcaagaagccacataagtgtgaagtttgtggaaagagctttacccatcCATCTACTTTGAGgatacatcttttgattcatcagCACAAAAAGCtccataagtgtgaagtttgtggcaaaAGCTTTACCCATCTGTCTACTTTAAGaggacatcttttgattcatgagggcaaaaagcccCATAAATGTCAATTCTGTGGAAAGAGATTTACCCTTGCATCCACTTTGAGGGTACATcgtttgattcatgagggcaataAACCTCATAAGTGTGagatttgtgggaagagctttaccaaACCATCTTATTTGAAGatacatcttttaattcatgagggcaaaaagcccCATAAGTGCGAAgcttgtggaaagagttttatccGAGCATTTCATTTGAAACAACATCTTATGATTCATGAAAGCAAAAAGCCCCAcatgtgtgaagtttgtggaaagagttttatccAAGCATATTCTTTGAAgacacatcttttaattcatcagggcaagaagccatataaatgtgaagtttgtgggaagagctttattcGAGCCTCTATTTTGAAGATACATCTTTTGACTCATGAGGGCAAAAAGtcccataagtgtgaagtttgtggaaagagctttatccaTGCCTCTAGTTTGAAGgcacatattttgattcatgaaggcaaaaAATCCCAtaattgtgaagtttgtggaaagagctttatccgAGCCTCTATTTTGAaggcacatcttttgattcatgaggacaAAAAGTCCCATAAATGTGatgtttgtggaaagagctttacccgaGCCTCTAGTTTGAaggcacatcttttgattcatgaggacgAAACACCCCATAAGTGTGATGTTTGTGGAAAAAGCTTTACCCGAGCCTCTAGTTTAAAgccacatcttttgattcatgagagcAAAAAgtcacataagtgtgaagtttgtgggaagagctttatccgAGCCTCTTGTTTGAAGACACATTTTTTGATTCATGGTGGTgaaaagccacataagtgtgaagtttgtgggaagagctttatccgACCCTCTAGTTTGAAGGCACATCTTTttattcatgagggcaaaaagccacataagtgtgaagtttgtgggaagagctttatccatGCCTCTAGTTTGaagacacatcttttgattcataaggaCAAAAAGTcctataaatgtgaagtttgtggaaagagttttatccGAGCCTCTAGTTTGAaggcacatcttttgattcatgagagcAAGAAGCCCCAtgagtgtgaagtttgtgggaagagctttaccagTGTGTATTATTTGAAgcatcatcttttgattcatgagggcataAAGGCCCatatatgtgaagtttgtggaaagagttttacccTTCCATCTtctttaaggaaacatcttttgattcatgagggcaagaagccacataagtgtgaagtttgtggtaaaagCTTTACCAATCCATCTTATTTGAAGgcacatcttttaattcatgaggacAAAAGGCCCCATAAATGTGAAgcttgtggaaagagttttatcctagcatttcatttgaagcaacatcttttgattcatgaaggcaaaaAGCGCCATAactgtgaaatttgtgggaagagctttatctaTGCCTTTAATTTGAAGGTACATCTTTTGAGTCATGAAGGCAAAAAGTCCCATAAGTGTGagGACAAGAAGACACATAtgtgtgaagtttgtgaaaagagTTTTACCCATTCATCTACTTTGAAGACACATCTTTTTATTCAtcagggcaagaagccacataagtgtgaaatttgtgagaagaCCTTTATCCAAGCCTCTAATTTAAaggcacatcttttgattcatgagggcaaaaatcCCCATGTTATGATTTGA
Protein Sequence
MDLKLEINEEPLDYDMALLELKPETEEESSCSTALDTEVKSLEIINKSIDYEKLGIKLETKEELLDPVENAGDFISKTVEENSYSIARDSILENEIKSERMIIECSGYEKMDPKLEFKDANKDPLELKFKTVEEIANNDGQDTLLKKEIKEQKEPDIALMKEDITIEESDFTYSDPGAHLGDLSMYMDNSSTTYIESKDNKKKQEFKCIFCETIFIDTSSLRDHLLSHDSEKEYKCKFCGEHFTQASVWLNHILIHEDKKRLECELCGKIFTQTSSLRRHLLIHQGKKPHKCEVCGKSFTLASTLRVHLLIHEGKKPHKCEVCGKSFTHLSTLKAHISIHGVKKSHKCEVCGKSYNYASSLRQHLFIHEGKKPHKCEVCGKSFTHPSTLRIHLLIHQHKKLHKCEVCGKSFTHLSTLRGHLLIHEGKKPHKCQFCGKRFTLASTLRVHRLIHEGNKPHKCEICGKSFTKPSYLKIHLLIHEGKKPHKCEACGKSFIRAFHLKQHLMIHESKKPHMCEVCGKSFIQAYSLKTHLLIHQGKKPYKCEVCGKSFIRASILKIHLLTHEGKKSHKCEVCGKSFIHASSLKAHILIHEGKKSHNCEVCGKSFIRASILKAHLLIHEDKKSHKCDVCGKSFTRASSLKAHLLIHEDETPHKCDVCGKSFTRASSLKPHLLIHESKKSHKCEVCGKSFIRASCLKTHFLIHGGEKPHKCEVCGKSFIRPSSLKAHLFIHEGKKPHKCEVCGKSFIHASSLKTHLLIHKDKKSYKCEVCGKSFIRASSLKAHLLIHESKKPHECEVCGKSFTSVYYLKHHLLIHEGIKAHICEVCGKSFTLPSSLRKHLLIHEGKKPHKCEVCGKSFTNPSYLKAHLLIHEDKRPHKCEACGKSFILAFHLKQHLLIHEGKKRHNCEICGKSFIYAFNLKVHLLSHEGKKSHKCEDKKTHMCEVCEKSFTHSSTLKTHLFIHQGKKPHKCEICEKTFIQASNLKAHLLIHEGKNPHVMI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-