Mvio002771.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- -
- Assembly
- GCA_030762175.1
- Location
- CM060830.1:92469038-92502569[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0012 2 10.3 1.2 13 39 123 146 115 153 0.86 2 9 0.041 70 5.4 0.8 17 29 155 167 147 183 0.82 3 9 0.28 4.7e+02 2.7 2.1 18 39 184 202 172 209 0.80 4 9 0.0044 7.6 8.4 0.8 1 38 196 229 196 230 0.85 5 9 0.00032 0.55 12.1 1.3 6 40 229 264 224 270 0.76 6 9 5.9 1e+04 -1.6 0.2 18 25 268 275 260 276 0.84 7 9 3e-05 0.051 15.4 3.4 2 44 281 322 280 322 0.91 8 9 0.17 2.9e+02 3.4 1.0 17 38 323 341 316 343 0.82 9 9 0.0029 4.9 9.0 0.8 5 28 340 362 336 370 0.88
Sequence Information
- Coding Sequence
- ATGGATATTAAGCTAGAAATTAAGGAAGAACCACTGGActgtgaaacatattcatttGAGTTGAAATCAGAAACTACAGAAGAGAATAGTGATGCTCCCAACAACACTGTTTCAGAGCTTGAGGAGGAGAAAGAGGTTGACATAGCTTTAATGAAGGAAGAAGTCACAGTTGAGGAATTAAATGTTCCACCCAGTGATCCAGGGCCACATGTGGAAGATCTATGCAGCAGTTTGGAGAATTCATCCACTTCTTTTATTGAGGTTATACATGAAAGTATAAAAGAGCACATGTTGACCCATGAACATAACAgcaaccatccatccatccttgcAGCAATACTGAGCAACCATAATCTTATTTATAATGACAAGAAGTCGCATAGATGTGGACTTTGTGGAAAGAGCTTCACCCGTGCATCTGATTTGAAGAGACATATATTGAcgcatgagggcaagaagccattTAAGTGTCaattttgtgggaaaaacttCACTCAGGCTTCTCACTTGAGAGAGCATTatttgattcatgaaggcaagaGGCCTCATAAGTGTAAAgcttgtgggaagagctttatcaaAGCATCTAACTTGAagggacatcttttgattcatgagcgCAAGAAGGCATATGAGTGTGAAGCTTGTGGGAAGAGCTTCACTCGTGCATCTGATTTGAGAAGACATGCATTGATTCATGAGGGGAAGAAGCCATTTAAGTGTGAAAtatgtgggaagagctttacgcAGGTATCTggtttgaagaaacatcttttagttcatgaaggcaagaagccacataagtgtgaagtttgtgagaaaagTTTTATCCAGCCATCTGATTTGAAGAAGCATACTTTGATTCATCAGCGCAAGAACCCatgtaaatgtgaagtttgtggggaGAGTTTTAGTCGTGTATCTAATTTAAGAACACATCTTTTGATCCATAAGGACAAGCACCCATGTatttgtgaagtttgtggaaagagcttcaCTTATGCATCTGATTTGAGGAGACATTTTGTGATTCATGAGGACAAGAAACCATTTAAGTGTCAAGTCTGTGGGAAAAATTATACTCAGTACAACCAGCGTATTGCCACTACGGACTCTGAGAAAGCTGAAGCCCTAGCCGATGTCTTAGAGCCTACTTTAAAGCCGAACATCAGCCCATCATCTGCTCAGTTTATAGCAGACACTGAAGAGCTCACTAGTGGCATTGGCGACAGGCACACAACAACCGCATACAATAGCCCGGCAGACATCCTCCATGAAGACCTCCGGCTGCACACGGTAGAACAACTCATTAAAAAACTGGCCCATGATCTCTATCTTGGCAGACCAGACCATTATAATCCACTTAtatccaacttaggaaaatatcaGACAACCACTAACTCCTACCATAGACCGATGGCACTGTTTGAGCGCACTCTGCGCCCGGACGGTTCTGCTGCAGAAGCATAG
- Protein Sequence
- MDIKLEIKEEPLDCETYSFELKSETTEENSDAPNNTVSELEEEKEVDIALMKEEVTVEELNVPPSDPGPHVEDLCSSLENSSTSFIEVIHESIKEHMLTHEHNSNHPSILAAILSNHNLIYNDKKSHRCGLCGKSFTRASDLKRHILTHEGKKPFKCQFCGKNFTQASHLREHYLIHEGKRPHKCKACGKSFIKASNLKGHLLIHERKKAYECEACGKSFTRASDLRRHALIHEGKKPFKCEICGKSFTQVSGLKKHLLVHEGKKPHKCEVCEKSFIQPSDLKKHTLIHQRKNPCKCEVCGESFSRVSNLRTHLLIHKDKHPCICEVCGKSFTYASDLRRHFVIHEDKKPFKCQVCGKNYTQYNQRIATTDSEKAEALADVLEPTLKPNISPSSAQFIADTEELTSGIGDRHTTTAYNSPADILHEDLRLHTVEQLIKKLAHDLYLGRPDHYNPLISNLGKYQTTTNSYHRPMALFERTLRPDGSAAEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995565;
- 90% Identity
- iTF_00995565;
- 80% Identity
- iTF_00995565;