Mvio005574.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- -
- Assembly
- GCA_030762175.1
- Location
- CM060831.1:93023478-93024836[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.8 1.4e+03 1.2 0.9 14 29 56 71 44 87 0.73 2 14 0.00059 1 11.2 0.8 18 41 88 113 77 116 0.81 3 14 0.78 1.3e+03 1.3 4.7 18 43 116 143 107 144 0.84 4 14 0.043 74 5.3 1.7 18 39 144 162 141 172 0.83 5 14 0.042 72 5.3 3.4 15 39 169 190 163 200 0.80 6 14 0.024 42 6.1 2.7 18 39 200 218 194 227 0.87 7 14 0.42 7.2e+02 2.1 0.7 18 39 228 246 220 250 0.86 8 14 0.66 1.1e+03 1.5 4.4 17 39 255 274 242 284 0.77 9 14 0.0002 0.34 12.8 2.3 18 39 284 302 276 312 0.84 10 14 0.0039 6.7 8.6 3.9 18 43 312 339 304 340 0.88 11 14 0.00018 0.31 12.9 3.4 15 39 337 358 331 368 0.81 12 14 0.9 1.5e+03 1.0 1.1 17 28 367 378 361 395 0.78 13 14 2.8e-05 0.048 15.5 3.2 18 44 396 424 379 424 0.87 14 14 0.0008 1.4 10.8 3.4 15 39 421 442 415 452 0.83
Sequence Information
- Coding Sequence
- ATGGCACATAAATGTGACGCGtttgggaagagctttactcagacatcTACTTCAAAGATCCATTTTTTGATGAATGAGGGTGAGataccacataaatgtgaagattTTGGGGAAAGCTTTACTCAGGCATCTCATTTAAGTAATcaccttttgattcatgaaggtaggAAGCCacttaaatgtgaagtttgtgaaaagGGATTTACCCAGACGCTTCATTTAAGGGTTcaccttttgattcatgagggtaagaagccacattcatgtgaaatttgtgggaaaagttTTACTGGAGCATCTAATTTAAGaagtcatcttttgattcatgagggtaggaaaccacataaatgtgaagtttgcggAAAGTGCTTTACCCTGACATCttatttaaggaaacatcttttgatgcatgagggtaagagaccacataaatgtgaagtttgtgaaaaaagctttacccagacatctcatttaagggaacaccttttgattcatgagggtaagaatacacataaatgtaaagtttgtgggaaaagctttacacTGACATCTTACTTAAGAAAACATCTATTGATGcacgagggtaagaagccacataaatgtgaagtttgtggtaagagcttAACCTGTTCATCTACTTTAaggcaacatcttttgattcatgagggtaagaaaccacatatatGTGAAGTTTGCGGGAAGGGCTTTACCCTAAGAACTACTTTAAAGAGACATGTTatgatacataagggtgagatgccacataaatgtgaaatttgtgggaagtgCTTTACTTGGGCATCTGCTTTAAGCAGACACCTTTTAATGCAtaagggtaagaagccacataaatgtgaagtttgtgggaagagttttacccggacatctactttaaggaggcatcttttgatgcatgagggtaagaagccacataaatgtgagctttgtgagaagagctttactcgGATATCTACtttaaggacacatcttttgattcataagggtaagaaagcacataaatgtgaagtttgtgggaagagctttacccaaacATCTAATTTAAgaagacatcttttgatgcatgagggtaagaaactacataaatgtgaagtttgtggaaagagctttacccagtTATCTTATTTAAgggaacatattttgattcatgggggtaagaaaccacataaatgtgaagtttgtggaaagaactttacTCAGACATCAAATTTAAGAAGACATCTTTTAATGCATGAGGGCAAAAaggcacataaatgtgaagtttgtgggaagagctttacccggacatctactttaaggaaacatcttttgatgcatgtgGGTAAGAAGCTACATAATTGA
- Protein Sequence
- MAHKCDAFGKSFTQTSTSKIHFLMNEGEIPHKCEDFGESFTQASHLSNHLLIHEGRKPLKCEVCEKGFTQTLHLRVHLLIHEGKKPHSCEICGKSFTGASNLRSHLLIHEGRKPHKCEVCGKCFTLTSYLRKHLLMHEGKRPHKCEVCEKSFTQTSHLREHLLIHEGKNTHKCKVCGKSFTLTSYLRKHLLMHEGKKPHKCEVCGKSLTCSSTLRQHLLIHEGKKPHICEVCGKGFTLRTTLKRHVMIHKGEMPHKCEICGKCFTWASALSRHLLMHKGKKPHKCEVCGKSFTRTSTLRRHLLMHEGKKPHKCELCEKSFTRISTLRTHLLIHKGKKAHKCEVCGKSFTQTSNLRRHLLMHEGKKLHKCEVCGKSFTQLSYLREHILIHGGKKPHKCEVCGKNFTQTSNLRRHLLMHEGKKAHKCEVCGKSFTRTSTLRKHLLMHVGKKLHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995459;
- 90% Identity
- iTF_00995459;
- 80% Identity
- iTF_00995459;