Mvio017564.1
Basic Information
- Insect
- Metallyticus violacea
- Gene Symbol
- -
- Assembly
- GCA_030762175.1
- Location
- CM060834.1:59293340-59304588[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.3e-08 0.00018 22.9 0.0 8 39 44 76 42 81 0.88 2 3 4 1.4e+04 -2.3 0.0 30 38 192 200 191 202 0.83 3 3 0.83 2.8e+03 -0.1 0.1 29 38 303 312 303 317 0.88
Sequence Information
- Coding Sequence
- ATGTCAGAGCCTCACTCAGCCCCACAGATAGAGGTGGGTGACCTTACTGATGCAACCATTGATACATTACTGCGCTCACTTGCTGGGGATGTGATGTTCCGTAAATATTCTGTTCAGAGTGTTACTTGTGCACTGGAAGCTGTATTCAAACAGGGCATGACTGTCAGCGAAGCATCTTTGAGATTTGGCATCAAACGTTCAACTCTGCAATTCTATCTCAAGAAACTAAATGTGGTCATGAGGAGATCTAGTTTTGCACCATGGCATGTTGCAGATAGATCAACAGACGAAGTATTCATGGCAGCACAAGAAGCTGTAGGGGCTCATAGGGACTCACAAGCATGGCATGGATCACATTCTATTAATAGTGGACTGATGGCCACCTGGGTGCAAGATGGTAGCATGGTGGCTTCTCCATACCAAGAAGTGCTTGGTCTAAGCAACTCCAGTGGCAAGCCTTTAAGTTGCCCTCGCTGTGATCGCAAGTACACCGTTTTGTACACTTTAGAGCGACTTGGCTCGTTTGATCCTCTCCAGTTCGTGTGCCCCCGTTGTGGGCGGCGCTACTTTGCAGCACGTTCACTATGGCGTCATATCAAGTTTGAATGTGGAGTGGAGCCTCGTTTTCATTTGTATGCTGGGCCACGGGGCCCTCTGATGTATCCAGGTAACATCTGCCAGTACTGTGGACGTAGGTACAAGTATCGCAGTGGATTGGCCCGGCATCTACCAGAATGTGATCTCATCCCCAAGAATAGCTCGCTTATCGATCAGCGAGTTGACATGCATGGTATCTTTGCAGGCATGGACATGTCAACTCAAGCGATGTATGTATACAGTGTTGGAACAATGTCTGAAGAATGCGGTCAGCTTCATGTGTGTCAGCTGTGTGGAAAAAGCTACAAGTCACGATCAACTCTAAACAGGCATCTCCGTTACGAGTGTGGGAGGGCTCGTTTCAAACTGGAGTGTTCCGTATGTGGAAGGAAGTTCTCACGTCCTGATAATTTACGTCAGCATGCGATTATCCACATATCTGGTCATAAGAGTGGCGGTGCTATTGTTTTTCAAGAAACTGAGAGCTTGTGA
- Protein Sequence
- MSEPHSAPQIEVGDLTDATIDTLLRSLAGDVMFRKYSVQSVTCALEAVFKQGMTVSEASLRFGIKRSTLQFYLKKLNVVMRRSSFAPWHVADRSTDEVFMAAQEAVGAHRDSQAWHGSHSINSGLMATWVQDGSMVASPYQEVLGLSNSSGKPLSCPRCDRKYTVLYTLERLGSFDPLQFVCPRCGRRYFAARSLWRHIKFECGVEPRFHLYAGPRGPLMYPGNICQYCGRRYKYRSGLARHLPECDLIPKNSSLIDQRVDMHGIFAGMDMSTQAMYVYSVGTMSEECGQLHVCQLCGKSYKSRSTLNRHLRYECGRARFKLECSVCGRKFSRPDNLRQHAIIHISGHKSGGAIVFQETESL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00995771;
- 90% Identity
- iTF_00995771;
- 80% Identity
- iTF_00995771;