Basic Information

Gene Symbol
KDM5A
Assembly
GCA_030762175.1
Location
CM060835.1:23100195-23104955[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.2e-24 3.7e-20 73.9 0.1 2 89 93 176 92 176 0.94
2 2 2.8 2e+04 -2.2 0.0 23 54 241 273 227 289 0.78

Sequence Information

Coding Sequence
ATGGCGACAAAGAACGAAGCTTCGAAGGGTAAAGCATGGGAAAGTGATTTTCATTTTGCTGCGCCGAAAGAAGTGCCAGTGTTTGAGCCAACCGAAGAAGAATTTGAAGATCCACTTGCATACATAAAAGCAATTCGACCTGTGGCACAGGAAACAGGAATTTGTAAAATCAAACCGCCACCGAATTGGCAGCCGCCGTTTACCGTTGACATTGATAATTTTAAGTTTACCCCGAGAAAGCAACGGCTAAATGAACTGGAAGCAAACACAAGAATAAAGCTGAACTTCCTGGATCAAATTGCAAAGTTTTCGGAGCTACAAGGCTCTGCATTAAAAATACCATCTGTGCAGAGCAAACCATTAGACCTTTATACACTTAATAAACTAGTACAAGAATTAGGAGGTTCAGATAcagtaacaaaagaaaagaagTGGTCTCTAGTTGCTAAAAAAATTGGGTATGCTGGTGACAAGGAGATTGAACATGTGTTAAAGaatcattttgagaaaattttgcaaCCTTATGATGTATTCCAGCAAAATTGTACAggtgaaattaaaatgtcaatggaGAAggacattaataatgaaaaatctaatcAGAATTACAAACCACATGGTATTGTTTCAAGGCAAGCAATCAAACCACCTCAAGAGAAATATTGTAGAAGATCTCAGCTTGAGGCCAGAACATCCATTTCTGACATATCTTCTGAGGATCAGCCTAAGCTTTGCAAAAGCAAAGAGTTACAGCGTTTGCAGTTCTATGGTGCTGGTCCAAAGATGGCAGGTTATCAGTATGTTAATGAGGATaaccttaaaaacaaaacaagaggGAGGAAAGCAAACTATCAATTTGATCCTTTGGCAAAATACACATGTCAGACCTGTGGTGAGGATGACATGGAGAAACGCATGTTGCCTTGTGATACATGTGAACACTATTATCACATGCTTTGCCTTGTCCCACCTATGCAGGAACCTCCGAAAGATCTCTGGAGTTGCCCTAAATGTGTTGCTAAGGAAGTAAGCAAGCCAACAGAAGCATTTGGTTTTGAGCAGGCAGAAAGAGATTACACTCTACAGGAGTTTGGAGAAAAGGCTGACAAGTTTAAGGCTGAATATTTTGGAGTTCGAGGATGTCTTGTACCATTGGATGTGGTGGAGAGAGAATTTTGGCGTATTCTTTCTTCAATAGATGAAGATGTGACTGTTGAATATGGAGCAGATTTACATACAATGGATCATGGGTCTGGCTTTCCAACTAAACTCACCCCAAATTTGCATCCagtagatgctgtttatgcacattcaGGCTGGAACTTGAATAACATTCCAGTTCTTGAGGATTCAGTTCTGGGCCATATAAATGCAGATATATCTGGAATGAAGGTTCCTTGGATGTATGTAGGAATgtgttttgcaacattttgttgGCATAACGAAGATCATTGGAGCTACTCAATCAATTATTTACATTGGGGTGAACCTAAAACCTGGTATGGAGTGCCTGGAAGTTATGCAGAAAAGTTTGAAGCAGCAATGAGAAAGGCAGCACCAGAACTATTTGCCTCACAGCCTGATTTGTTACACCAACTTGTTACAATCATGAATCCAAACACACTCATGAAAGAAGGCGTGCCAATTTTTAGAACTGACCAGCATGCTGGAGAATTTGTACTGACATTTCCAAGAGCTTACCATGCTGGTTTTAACCAAGGTTTTAACTTTGCAGAAGCTGTTAATTTTGCTCCAGCTGACTGGTTGTCAATGGGCAGAGAATGTGTGGAACATTACTCTGTACTTCGACGTTTTTGTGTATTTTCACATGATGAGCTTGTTTGCATTATGGCCCAGAAACCAGAACGCTTGAATAAGACTATAGCTACAGCCACATATAAGgatgtattgaaaatgtttaaaagtgagCAGAAATTAAGAAAATCATTGTTGGAATGGGGTCTTAAAAACACTGAGCTTGTGTTTTTTGAACAACTTCCAGATGATGCTCGTCAGTGCGAGGTATGTAAAACTACATGTTTTCTATCAGCAGTTACCTGTAGTTGCTTGGAGGAAAAATTGGTGTGTCTTAGGCATTACACAGGCCTTTGTGATTGTCCAGCTGCCAATCACATTCTTAAATATAGATACGACTTGCATGAACTTGCTGATATGGTTCGGAGAATGAAGAAAAGAGCAGAAACTTTTGATGCTTGGCTTGCAGATGTGAGGGATGCTCTAGCTCCAGAATcagggaagaagaaagaattgcATGAATTAAAACAGCTATTACAGGAAGCAGAGGACAAAAAGTTTCCACATTCGGAGTTACTTGAGAGGATATCTCAAATTGTTGAGCATGGTGAAAAATGTGCAAAGGTTGCAGCAGGTCTTCAGAAAAGACGATCAAAATGGCAGAAAGCTAAAACCATTAATGATATGTCAGTTGTGGAGAAAGGTGCATTAACCCTGGaggatttaatcctgtttaattctGAAATAGAACTTTCGCCATGCCATATTCAGGAATGTGATGACATAGGACAGTTACTGTCTAATATAAAGGCTTTCCAGATTGAAGCTGCTGAGCTTTTAAAACAAGAGACTCCAGAAGCAGCATTTATAGAGCAGTTTGTGGAGAAAGGCCTTTCCCTGGATGTGAAGATTCCAGAACTTGCAAATTTGGTAGAAATGTTCAATAAGATTAAATTCTTGGATGCTGTGAGAGCTATTCAAGAAAATATTAAGCAGCTCTCCATAGAGGATATGCAACAGCAACTGAAAATAGCTTCTGCACTAGTATCTCATAATGCAGTCAATGAGGCAGTACCAGAACTGCAAAAAGTTCTTTACCAAGCAGAATGTTGGGAGGAAAAAGCAAAGGCTTACATTGAAACCAATTCGAAGATGGAAATGAATTGTGTAATATCATTACTGATAGAGGCAGAAAATATACCAGCTCTATTGCCCACTAGATTACTTTTAAAGGAAGTACTGGAAAAAGCAAAGGAATGGATGAAACAAGCACAAGagctaaaagaaactaaatatctTCCTATAGAATCTTTGGAAGAACATGTCAGAAAGGGTAAGACTATTCCTATTCAGTTAGAACTGCTCTCAgaacttgaattaaaattaaaaagtgctgaGAGCTGGAAAGCTAGAGCAGGTCATATTTTCCTTAGAAAACGATCAATGTGCTCTCTTATAGAGATATTATTGCCTAATAAGGATTTTGGTAGTCCATTACTGAACTATCGaaagaaatatttagaagagCATGATAAACCCAAGAGAGATCCttttgtttgtgaaataaaatggacGGGAAATGCTGATCAGAATCAAATGACTGCCGCATACAGAGAAGCAGAAGAATTAGAAAAGACTGCAACTAGACAAGTTCGGTTAAATAACTCCAAGAAATGTGCTAGCAACATTGATATATCCACATATTGCATATGTGATGGAACTGCATCCAATGATATGTTGCAATGTGAGCTGTGTAAAGAGATGTTCCATCAGTCATGTTTACCCTTAAGAAAAAGAACTGATGATAGTTCAACAGAAGAGGTGTcatttgtagcagatcatatgtTCCTTTGCCCATTATGTTTGCGTTCACGGCGTCCACCACTGATAGTAATTCTGTCTTTGGTAGTATCTTTATATAAGCTAGATGTGCGCATGCCAGAAGGTGAAGCTCTACTGCACCTTGCAGAACGAGCTTTCAAATGGGTGGAATGTGCAAGACGAGCTCTTGCTAGAGAAGAAATTAAATCTTTTGTTGCAAAATTACCACCTTCCTTGCAAGATCTCGTAAAGAGAGACTTAAATAAATGTGGCAAAGTAACCAGaagtgtacataatattttagaaattcagGATAGCACAAACACAATCACATGTTCTGAAGATGAAAATCAGGTTCTAGATGGAAATACTTCTAGTCAAGTTGACCTTCCTGCTAGTGCCAAGGGCTTTGAAGAGAACAATAACTGTAATGACCATGACATCAAGATACCATTTTTATCAATGATTAACCTGGATGAAAAACCTACTTTAACAGAAGAGTTGCAGACAGAACTAGAAGATTTACTGTTAATTGGTAACTTAATCCAGGCTTCTTTTTATGAACTGCAATGCATATGGAAGATTCTGAAGATCACAAAGCCTAAAGATAAATTGCCTGAAATTGACGAAATATTGGCAAAGGATAAGTCGATAGGAAAGAGGAAGCCAGAAGATGAGCAAGACTCGGAGCCTGTGGGAAAAAGACTCAGATCACAGCTGGAGTTACAAGCTGCAGAGATCATCAATACACAGAGTGAATTACAAAAACAccttgtaaaatgtaatattcaaactACTAATGGAAATGAATCACATAATGGTGAACCTAAAGTGCATCAGGAACAAGgtaatgaagaagaagaggacTGCGGTGCTCCAAAATGCCTAAAGCCTACAGGAGAGCAGCTGGACTGGGTGCAGTGTGATGGGGACTGTGAAAAGTGGTTCCATCTTTATTGTGTGGGGTTGTGTATGGATGACATTAGCAAGGAGAAAGAATACATATGTAGCCAGTGCAAGCAAAATAAGGCATCCAGAGAAACTGCTAAGATTGCAGAGATAAATGAAGAACCAGAAATCATTATTGTAAGTATAAGTGAAGTGAAAATGGTAGGTAAGCCCAGGCATCTAAGGGAAAAAAATAGGTTGGACATTTCTTGCCTTTTGCAGAATACTGGGAATTAG
Protein Sequence
MATKNEASKGKAWESDFHFAAPKEVPVFEPTEEEFEDPLAYIKAIRPVAQETGICKIKPPPNWQPPFTVDIDNFKFTPRKQRLNELEANTRIKLNFLDQIAKFSELQGSALKIPSVQSKPLDLYTLNKLVQELGGSDTVTKEKKWSLVAKKIGYAGDKEIEHVLKNHFEKILQPYDVFQQNCTGEIKMSMEKDINNEKSNQNYKPHGIVSRQAIKPPQEKYCRRSQLEARTSISDISSEDQPKLCKSKELQRLQFYGAGPKMAGYQYVNEDNLKNKTRGRKANYQFDPLAKYTCQTCGEDDMEKRMLPCDTCEHYYHMLCLVPPMQEPPKDLWSCPKCVAKEVSKPTEAFGFEQAERDYTLQEFGEKADKFKAEYFGVRGCLVPLDVVEREFWRILSSIDEDVTVEYGADLHTMDHGSGFPTKLTPNLHPVDAVYAHSGWNLNNIPVLEDSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSYAEKFEAAMRKAAPELFASQPDLLHQLVTIMNPNTLMKEGVPIFRTDQHAGEFVLTFPRAYHAGFNQGFNFAEAVNFAPADWLSMGRECVEHYSVLRRFCVFSHDELVCIMAQKPERLNKTIATATYKDVLKMFKSEQKLRKSLLEWGLKNTELVFFEQLPDDARQCEVCKTTCFLSAVTCSCLEEKLVCLRHYTGLCDCPAANHILKYRYDLHELADMVRRMKKRAETFDAWLADVRDALAPESGKKKELHELKQLLQEAEDKKFPHSELLERISQIVEHGEKCAKVAAGLQKRRSKWQKAKTINDMSVVEKGALTLEDLILFNSEIELSPCHIQECDDIGQLLSNIKAFQIEAAELLKQETPEAAFIEQFVEKGLSLDVKIPELANLVEMFNKIKFLDAVRAIQENIKQLSIEDMQQQLKIASALVSHNAVNEAVPELQKVLYQAECWEEKAKAYIETNSKMEMNCVISLLIEAENIPALLPTRLLLKEVLEKAKEWMKQAQELKETKYLPIESLEEHVRKGKTIPIQLELLSELELKLKSAESWKARAGHIFLRKRSMCSLIEILLPNKDFGSPLLNYRKKYLEEHDKPKRDPFVCEIKWTGNADQNQMTAAYREAEELEKTATRQVRLNNSKKCASNIDISTYCICDGTASNDMLQCELCKEMFHQSCLPLRKRTDDSSTEEVSFVADHMFLCPLCLRSRRPPLIVILSLVVSLYKLDVRMPEGEALLHLAERAFKWVECARRALAREEIKSFVAKLPPSLQDLVKRDLNKCGKVTRSVHNILEIQDSTNTITCSEDENQVLDGNTSSQVDLPASAKGFEENNNCNDHDIKIPFLSMINLDEKPTLTEELQTELEDLLLIGNLIQASFYELQCIWKILKITKPKDKLPEIDEILAKDKSIGKRKPEDEQDSEPVGKRLRSQLELQAAEIINTQSELQKHLVKCNIQTTNGNESHNGEPKVHQEQGNEEEEDCGAPKCLKPTGEQLDWVQCDGDCEKWFHLYCVGLCMDDISKEKEYICSQCKQNKASRETAKIAEINEEPEIIIVSISEVKMVGKPRHLREKNRLDISCLLQNTGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-