Basic Information

Insect: Metalampra italica
Gene Symbol: -
Assembly: GCA_949699065.1
Location: OX452983.1:8760365-8769114[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.96 55 4.8 0.2 1 23 91 114 91 114 0.93

2 18 0.24 14 6.7 0.2 3 23 119 139 117 139 0.95

3 18 0.57 32 5.5 0.0 2 23 143 165 142 165 0.94

4 18 0.13 7.5 7.5 0.2 1 20 425 444 425 446 0.94

5 18 0.033 1.9 9.4 1.4 2 23 456 477 455 477 0.89

6 18 1.3 77 4.4 0.7 1 23 493 516 493 516 0.84

7 18 0.47 27 5.8 1.3 1 23 525 548 525 548 0.93

8 18 0.012 0.7 10.8 0.3 2 23 624 646 623 646 0.92

9 18 0.36 21 6.2 2.4 1 23 651 674 651 674 0.95

10 18 0.00058 0.033 14.9 4.2 1 23 680 702 680 702 0.95

11 18 1.7e-05 0.00097 19.8 0.9 1 23 709 731 709 731 0.98

12 18 0.0001 0.0059 17.3 2.3 1 23 736 758 736 758 0.96

13 18 0.00047 0.027 15.2 0.7 1 23 764 786 764 786 0.97

14 18 2.1e-06 0.00012 22.6 1.4 1 23 792 814 792 814 0.98

15 18 0.00037 0.021 15.6 1.6 2 23 821 842 821 842 0.98

16 18 0.001 0.059 14.2 0.7 2 23 851 873 850 873 0.97

17 18 0.0039 0.22 12.3 0.0 1 23 878 900 878 900 0.98

18 18 0.31 18 6.4 4.4 1 23 906 929 906 929 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.96	55	4.8	0.2	1	23	91	114	91	114	0.93
2	18	0.24	14	6.7	0.2	3	23	119	139	117	139	0.95
3	18	0.57	32	5.5	0.0	2	23	143	165	142	165	0.94
4	18	0.13	7.5	7.5	0.2	1	20	425	444	425	446	0.94
5	18	0.033	1.9	9.4	1.4	2	23	456	477	455	477	0.89
6	18	1.3	77	4.4	0.7	1	23	493	516	493	516	0.84
7	18	0.47	27	5.8	1.3	1	23	525	548	525	548	0.93
8	18	0.012	0.7	10.8	0.3	2	23	624	646	623	646	0.92
9	18	0.36	21	6.2	2.4	1	23	651	674	651	674	0.95
10	18	0.00058	0.033	14.9	4.2	1	23	680	702	680	702	0.95
11	18	1.7e-05	0.00097	19.8	0.9	1	23	709	731	709	731	0.98
12	18	0.0001	0.0059	17.3	2.3	1	23	736	758	736	758	0.96
13	18	0.00047	0.027	15.2	0.7	1	23	764	786	764	786	0.97
14	18	2.1e-06	0.00012	22.6	1.4	1	23	792	814	792	814	0.98
15	18	0.00037	0.021	15.6	1.6	2	23	821	842	821	842	0.98
16	18	0.001	0.059	14.2	0.7	2	23	851	873	850	873	0.97
17	18	0.0039	0.22	12.3	0.0	1	23	878	900	878	900	0.98
18	18	0.31	18	6.4	4.4	1	23	906	929	906	929	0.97

Sequence Information

Coding Sequence: ATGTCCTCGGACGAGTCTGATGATGAACCGCTGTCTATTTTGGCGAAGTCGAAACGACTGAACCCGGAAAAGTTTGCAGAGAAAACAGTCTCAGAAACGGAATTTGTTTACGAGCCCAAAACAAAGAAGAGAAGACCTAAGCCAACGTCTGAATCGTCGTACAAGAGGCTGCCTTTAACGTTTAAGTTCAGTAGTAAATTGAAGAGTCCAGTGGTCCAACGGCCTGCGGATGTGTGGTTGTATCAGAAAGACCTGAATCCTACAGGTCCTTACAGCTGTCTGCTCTGCTCTGAATGGTTCACAAATAGGATCAAGCTCATAATACACTATATATTGAATCACAAGAAGGATTTTTGTGGAATATGCAGGTATTTTGTATCAGATAGAGATGCTTGGCAATCACATCTCAACTTTCATAGTCCATGGCCATGCTCACAATGTATTGAGAGCTTTCCTAGTGAAATTGTTCTGCGGCAACACATGAGTAGCGTTCACAAGCTCGTACACTGCCGCCTCTGTCACTTCCGTATGCCTGACAATGATCAGTACAACACCCATTTGTTTCAAAAACACAACGTCACAAACGTGTCTAGTAAAGACGAGGATGTATATTGGGAATTGGAATATGAAGGGAGTCTAACATTCCTTTGCCTGCTATGTGCTAAGTCAAACAATTTAACATCAGCATTCTTCAAACACTTTATAAGCTTCCATCATTTCACTCTCAAATGTTTTACAAACACTATTTCAGGCAAAGATACACCATTTTCTGTCTATGGTGCTGATGTTAGCGCTTCATTTATTGAGACTTTGAAAGACAAAAAGTATGGTTATGTGGAATTGGACCGTAAACTATTTGAAGGCCAGGAACTTGAGGAAAATAAGAGTGATTCTTATGCTATGCTAAATGAACTaatgcctgaaataaaagaagaGGCATTTAGTGACGTGGAAGATACGAAAGACAGTGAAAATCAAACACAGAATAGGAATTTAAGTGAGCTCGTCAGATCTTATAGAGGTGATGAAGATTTTGATGTAACATTAATGGAGTTGGTTGTACTTCAAAGATGCTACTATGATTATATAAACAGAACATTGATTGAAATCACCTCAAACCGAGTGCCGGACATCTCTAATATTGATTATGATAAATCAAAATTGGACATTTCAGCTGAAATTGATTGTTCtttatgtaaaacaaaacatgaGAGTATTCAGATATTTGTGACACACATGTACAAAGCGCATAGCATTAAATCGGTACCAATATTCTCGTGCAGGGTTTGTGCAACAACTTTTGACACTCAAAATGAGCTGGACAGTCACACTACTGAGGAACTGGGTGATTTCGAAGATCTGTGGATCTGTCAATTTTGTGACAAAGAGTTTGACAATAGAGAAAAGGCAAGGCATCATCTGACAGAGCATTGGGAGGTGATGGAATATGACAACTGCTTCAGTCCACATTTAGGTTTCAAGTGCAAGTATTGTCCGACATTGTTTTGGAATGAAACGGACAGAGAGACTCATCAAGTCAGGGTACATTGTAACAAGTACAAAGAAAACTTTTACAGATGTGAAATTTGCATTGAATTGTTTAGTGACAAgATATGGTTCACGCACCACTACTTGGATAAGCATAACAGGGAAGAATCAGACTTATACTTGCTGAAGTGCAATATTTGCTGCCTAGTGCTGCCCAGTATAGAGAAGATGCGGGATCACTTCGGTGGTGAACATCCTGAAGCAAGGAAGGTGTTCTGCTCACTGGACTCATGCCAATATAGGCCGCTGAGTCATAAGAAATCCTTCCAATTGCATTTGAGGGCGCAGCACTGCACGCAGCAGCGCAAGGACGTGCCCGTGTCGTGCTCGGTGTGCACGCGCGAGTTCCCCAGCTCGCGCGCGCTGCACGCGCACACGGCGCAGGTGCACGGCCCCGGCAAGTACAAGTGCAAGATATGCAAGGAGACGCTGCACTCGCTGGATGAGAGAAAGCTGCACTACCTGATCCGCCACCCCGGGCACCATCCTTTCGAGTGCAACCAGTGCGGCAAGTCGTTCCAGTACAAGTCCTCGCTGTACATGCACAAGCACGAGCACCGGCCCAACAAGGAGAGCTTCACGTGCCCCTACTGCCAGAAGGTGTTTGGGAAGAAGGACTCGTTCCGCGAGCACGTGCAGATCCACGAGGGCCCGCGGCACGCGTGCTCGTACTGCCCCATGCGGTTCGTGCAGCGCTCCAACATGCTGCGGCACGAGCGGCGCCACACTGGCGAGCGCCCCTACGCGTGTCCGCAGTGCGACCGCACCTTCGCAGACAAGGGCGCGTGCACCTCGCACGTCAGGTCGCATTCCAAGGAAACGTCGTACGCTTGTTTGTACTGCGGGCAGACGTTTGTTCAGAAATCAAAACTAACCTACCATATTCGAAAGCACACTGGAGAAAACTTGGAGACATGCTCAGTCTGTTCGAAACTGTTCACGAGCCCGTGCGCGCTGCGGGAACACATGAAGGTCCACGACGCGAAGACCAAGGAGTCCGTCAAATGTCCCCTGTGTGACCGGAAGTACCAAGACGAGCGGTACATGCTGCGCCACCTGCGGACGTCGCACAGCCTGGTCCGTTACAACTGCCCGCTGTGCAAGAAGGGCCTCATGAACCCCGCGGGCCTGCGGAGCCACGTCATCACCCACAGCCCGCTCAATATCTTCCGATGCAAATGCTGCCCGAAGTCTTACGCAGTGAAAAGGACCATCCTGAAACATTTGCGCAAACGTCACAGTATAAAAGGGCAAATCGTGCAGGATTACTACCACAAACTGGAGCCCAGAGAGTGCCAGCTCGACCTCGACGAGGAAACGATGACAAGCATCTTCGGACCACCGAAGAAAACCAAAGCCGTCGACTTAATCATCGGCGACTTCGTTACGTTCAAAAAGTCGTTGAAATTTGCCGAGAGCGCGAAGAAAGTGGAAAACGATGACGAttccgatgatgatgatgatgacgacgacgatgatgatgagaatGCGAAATCAAAGGAGAGCAGCAAGACGAGCGATGAGGATAGTGGTCCGAAGATGAAGGTCGAAAGAGATGATGATCATAGCGGTGGAGAGTTGGAACCTACTGACTTTGTTAGCGTGAAAATTGAACATATGGACGAAGATGAAATTGAAAAGGattaa
Protein Sequence: MSSDESDDEPLSILAKSKRLNPEKFAEKTVSETEFVYEPKTKKRRPKPTSESSYKRLPLTFKFSSKLKSPVVQRPADVWLYQKDLNPTGPYSCLLCSEWFTNRIKLIIHYILNHKKDFCGICRYFVSDRDAWQSHLNFHSPWPCSQCIESFPSEIVLRQHMSSVHKLVHCRLCHFRMPDNDQYNTHLFQKHNVTNVSSKDEDVYWELEYEGSLTFLCLLCAKSNNLTSAFFKHFISFHHFTLKCFTNTISGKDTPFSVYGADVSASFIETLKDKKYGYVELDRKLFEGQELEENKSDSYAMLNELMPEIKEEAFSDVEDTKDSENQTQNRNLSELVRSYRGDEDFDVTLMELVVLQRCYYDYINRTLIEITSNRVPDISNIDYDKSKLDISAEIDCSLCKTKHESIQIFVTHMYKAHSIKSVPIFSCRVCATTFDTQNELDSHTTEELGDFEDLWICQFCDKEFDNREKARHHLTEHWEVMEYDNCFSPHLGFKCKYCPTLFWNETDRETHQVRVHCNKYKENFYRCEICIELFSDKIWFTHHYLDKHNREESDLYLLKCNICCLVLPSIEKMRDHFGGEHPEARKVFCSLDSCQYRPLSHKKSFQLHLRAQHCTQQRKDVPVSCSVCTREFPSSRALHAHTAQVHGPGKYKCKICKETLHSLDERKLHYLIRHPGHHPFECNQCGKSFQYKSSLYMHKHEHRPNKESFTCPYCQKVFGKKDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPQCDRTFADKGACTSHVRSHSKETSYACLYCGQTFVQKSKLTYHIRKHTGENLETCSVCSKLFTSPCALREHMKVHDAKTKESVKCPLCDRKYQDERYMLRHLRTSHSLVRYNCPLCKKGLMNPAGLRSHVITHSPLNIFRCKCCPKSYAVKRTILKHLRKRHSIKGQIVQDYYHKLEPRECQLDLDEETMTSIFGPPKKTKAVDLIIGDFVTFKKSLKFAESAKKVENDDDSDDDDDDDDDDDENAKSKESSKTSDEDSGPKMKVERDDDHSGGELEPTDFVSVKIEHMDEDEIEKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00674544;
90% Identity: iTF_00674544;
80% Identity: -